Dryobates pubescens (Downy woodpecker): 104301270
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Entry
104301270 CDS
T08526
Symbol
DSCAML1
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dpub04515
]
104301270 (DSCAML1)
Cell adhesion molecules [BR:
dpub04515
]
Immunoglobulin superfamily
DSCAM family
104301270 (DSCAML1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
V-set
Pur_ac_phosph_N
C2-set_2
ATP1G1_PLM_MAT8
Ig_6
V-set_CD47
Receptor_2B4
Interfer-bind
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
104301270
NCBI-ProteinID:
XP_009899975
LinkDB
All DBs
Position
Unknown
AA seq
1782 aa
AA seq
DB search
MGDEQAPGQGLDRFSYDYETIRNGGLIFAVVAFVVGLLIILTHAEDVGTSLYFVNDSIQQ
VTFSSTVGVVIPCPAAGSPSAVLRWYLATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNS
FIHDNDYFCTAENSAGKIRSPNIRVKAVFREPYTVRVEDQRSMRGNVAVFKCLIPSSVQE
YVSVVSWEKDTVSIIPENRFFITSYGGLYISDVQKEDALSTYRCITKHKYSGETRQSNGA
RLSVSDPAESIPTMLDSFQSREVKAGRLVELPCIASGYPNPAVRWIKDGRPLPPDGRWAK
RITGLTISDLRVEDSGTYICEVTNTFGSAEVTGTLTVIDPLRVTLTPKKLKTGIGSTVIL
SCALSGSPEYVLRWYRNTELVVVDDYISIRGISNETLLITAAQKSHSGAYQCFATRKSQT
AQDFSIITLEVVRLMATAATAQTLPDTIQPALRSSSGVCRHSFPSAEVPPEIQGGAGCGP
AAAEGPRPPPGAVPGAGEELEGAAAEQLSPRRLREEPEPAPHPKAGWVPAALVASFACEA
LSGVAAALHASSLPFGINLACLFLPAPYVGPPSIRAMKNITAVAGRDTFINCRVIGYPYY
SIKWYKDSLLLPDNHRQVVFENGTLKLMDVQKGMDEGEYLCSVLIQPQLSISQSVHVTVK
VPPLIQPFEFPPASIGQLLYIPCVVSSGDMPIHITWRKDGHVILSGSGVTIESKEFMSSL
QISSVSLKHNGNYTCIASNDAATVSRERQLIGSVPPRFVVQPNNQDGIYGKAGVLNCSVD
GYPPPKVMWKHAKGSGNPQQYHPIPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVG
TDISKSMFLTVKIPAMITSHPNTTIAIKGQTKELNCTARGERPIIIRWEKGDTVIDPDRN
MRYAITTKDNGDEVISTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELE
IREVKARSMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHP
ASVYSIRMYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPMTSQSIQVTWKAPKKEL
QNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGT
GPSSSEINATTLEDVPSQPPENVRAISITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLY
MDGEWGEMQNITTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDIPGPP
AGIKAVPSSASSVVVSWLPPAKPNGIIRKYTIFCSSPGSGQPAPSEYETSPDQLFYRIAH
LNRGQQYLLWVAAVTSAGRGNISEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSV
GEPVPAIKWTKDSEDSAIPVTVDGHRLIQANGTLVLRSVKAEDSGYYTCTATNTWGFDTI
IINLLVQVPPDQPRLTVSKTSASSITLAWIPGDNGGGSIRGFVLQYSVDNSEEWKDVFIS
SSERSFKLESLKCGTWYKVKLAAKNNLQGWSSGGCPITAILLEYRPKGNWGWQSLRTNSS
SEVFLTELREATWYELRMKACNSAGCGNESAQFATLDYDGSTIPPIKSAQGEGDDVKKLF
TIACPVILATLGVALLFIIRKKRKEKRLKRLRDAKSLAEMLISKNNRSFDTPVKGPPQGP
RLHIDIPRVQLLIEDKEGIKQLGDDKATIPVTDTEFSQAVNPQSFCTGVSLHHPALIQNT
GPLIDMSDIRPGTTSDWRTVGSQHGITVPESDSYSASLSQDT
NT seq
5347 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacgagcaagcaccagggcagggcttggacaggttcagctacgactatgagacc
atccgcaacgggggcctgatcttcgccgtcgtggcttttgtggtcgggctcctcatcatc
ctcacacatgctgaagatgttggaaccagcctctactttgtgaacgactccatccagcag
gtgaccttctccagcacagtgggggtggtgatcccctgcccggccgcggggtcacccagc
gccgtcctccggtggtacctggccacgggcgacgacatctacgatgtgccccacatcagg
cacgtccatgccaatgggactttgcagctctaccccttctcgccatcagccttcaacagc
ttcatccacgacaacgactacttctgcacagctgagaactcggctggcaagatcaggagc
cccaacatccgcgtcaaagcagttttcagggagccgtacaccgttcgggtggaggaccaa
aggtcgatgcgtggaaacgtggctgttttcaagtgcctcatcccctcttcagtgcaggaa
tatgttagtgttgtctcctgggagaaggacaccgtctctatcatcccagaaaataggttt
tttattacttcttacggaggtttgtacatatctgacgtgcagaaggaagatgccttgtcc
acctacaggtgtatcaccaagcacaagtacagcggcgagacgcggcagagcaacggcgcc
aggctctccgtctcagacccagcagagtccatccccacgatgctagacagcttccagtcc
cgggaggtgaaggccggcaggctggtggagctgccctgcatagcctcgggctaccccaac
ccagccgtgcggtggatcaaggacgggaggccgctgccccccgacggccgctgggccaag
cgcatcacagggctgaccatcagcgacctgcgggtggaggacagcggcacctacatctgc
gaggtgaccaacaccttcggctccgcagaggtcaccggcaccctcactgtcatagaccct
ctgcgtgtgaccctgacaccaaagaagctcaagaccggcatcggcagcaccgtcatcctc
tcctgcgccctcagcggctcccccgagtacgtcctccgctggtaccgcaacacggagctg
gtggtggtggatgactacatctccatccggggcatcagcaacgagaccctgctcatcaca
gccgcccagaagagccactctggggcctaccagtgctttgccacccgcaagtcccagaca
gcacaggacttctccatcatcacgctggaggtggtgcgcctgatggccacggctgctacc
gcacagacgcttccagacaccatccagcctgccctgaggagcagcagtggtgtctgcagg
cacagcttccccagcgccgaggttccccctgagatccagggtggggctggctgcggcccg
gccgccgcggaggggccacggccgccgcccggagctgtcccaggcgcgggcgaggagctg
gagggtgcagctgctgagcagctttccccacgcaggctcagggaggagcccgagcccgct
cctcaccctaaagcaggctgggtcccggctgctctggtcgcctcctttgcctgcgaagct
ctctctggagtagcagcagctctgcatgcaagcagcctgcccttcggaattaacctagcc
tgcctcttccttcctgccccatatgtaggtccccccagcatccgagccatgaagaacatc
acggcggtagccggtagggacactttcatcaactgcagggtgattggctacccctattac
tccatcaagtggtacaaggattctttgctgctgcccgataaccaccgccaagtggtcttt
gagaacgggacccttaagctgatggacgtgcagaagggcatggacgaaggggagtacctg
tgcagcgtgctgatccagccccagctctccatcagccagagcgtccacgtcaccgtgaaa
gtccctccgctgatccagcccttcgagttcccgccagcctccatcgggcagctcctctac
atcccctgtgtggtctcctccggggacatgcccatccacatcacctggaggaaggacggg
cacgtcatcctctccggctccggggtcaccatcgagagcaaggagttcatgagctccctg
cagatctccagcgtctccctcaagcacaacggcaactacacctgcatcgccagcaacgac
gccgccaccgtcagccgcgagagacagctcatcggcagcgtgcctcctcgctttgtggtg
caacccaacaaccaagatggcatttatggcaaagctggggtgctgaactgctccgttgat
gggtacccccctcccaaagtcatgtggaaacacgccaaaggaagtggcaacccgcagcag
taccaccccatccccctcacgggccgcatccagatcctgcccaacagctccctgctcatc
cgccacgtgctggaggaggacattggctactacctctgccaggccagcaacggcgtgggc
acagacatcagcaagtccatgttcctcaccgtgaagatcccggccatgatcacctcccac
cccaacaccaccatcgccatcaaggggcagacgaaggagctgaactgcacggcgcggggg
gagcggccaatcatcatccgctgggagaagggcgacaccgtcatcgaccccgaccgcaac
atgcgctacgccatcaccaccaaggacaacggcgacgaggtcatctccaccctcaagctg
aagccagcggaccgcggggactctgtcttcttctcctgccacgccatcaactcctacggg
gaggacagaggcttgatccagctcaccgtccaagagccccctgacccgccggagctggag
atccgcgaggtgaaagctcggagcatgaacctgcggtggacgcagcgcttcgacggcaac
agcatcatcaccggcttcgacatcgagtacaagaacaagtcagactcctgggattttaag
cagtccacaaggaacatctccccgaccatcaaccaggccaacatcgtggacctgcaccca
gcctctgtctacagcatccggatgtactccttcaacaagatcggccgcagcgagcccagc
aaggagctgaccatcagcaccgaggaagcagctcctgacgggccgccgatggatgtcacc
ttgcagccaatgacgtcccagagcatccaggtcacctggaaggcccccaagaaggagctg
cagaacggagtgatccgggggtaccagatcgggtaccgggagaacagccccggcagcaac
gggcagtacagcatcgtggagatgaaggccacgggggacagcgaggtctacactctggac
aacctcaagaagtttgcccagtatggggtggtggtgcaggccttcaaccgcgcagggaca
gggccatcatccagcgagatcaacgccaccacgctggaggatgttcccagccagcccccc
gagaacgtcagagccatctccatcacctcggacgtggctgtgatctcctggtcggagcct
ccgcgcagcaccctcaacggcgtgctcaagggctacagagtcatcttctggtccctctac
atggatggagagtggggtgagatgcagaacatcaccacaacccgggagcgagtggagctg
aggggcatggagaagttcaccaactacagcgtgcaggtgctggcgtacacccaggctggc
gacggcgtccgcagcagcgtgctctacatccagaccaaggaggacattccaggtccccca
gctggcatcaaggctgtcccttcctctgccagcagtgtggtggtgtcctggctgccccca
gccaagcccaacggcatcattcggaagtacacaatcttctgctccagccccggctcgggg
cagccggctcccagtgagtatgagaccagccctgaccaactcttctaccgcattgcccac
ctgaaccgcgggcagcagtacctgctctgggtggctgcggtcacctccgccggccgcggc
aacatcagtgagaaagtcaccatcgagcctgctgggaaagcccctgccaagatcatctcc
ttcggaggcactgtcaccacgccctggatgaaggacgtgaggctgccctgcaactctgtt
ggggagccagtccctgccatcaagtggaccaaggacagcgaggactctgccatccctgtg
accgtggacggccatcggctgatccaggccaacgggaccctggtgctgcgctcggtcaaa
gcagaggactctgggtactacacctgcacggccaccaacacctggggcttcgacaccatc
atcatcaacctgctggtgcaagtgcccccagaccagccccgcctgaccgtctccaagacc
tcggcgtcgtccatcacgctggcctggattcccggggacaatgggggcggctccatccga
ggcttcgtgctgcagtactcggtggacaacagcgaggagtggaaggacgtcttcatcagc
tcctccgagcgctccttcaagctggagagcctcaagtgcggcacctggtacaaggtgaag
ctggcagccaagaacaacctgcagggctggagcagtgggggatgccccatcactgccatc
ctgctggagtacaggcccaagggcaactggggctggcagagcctccgcaccaacagctcc
agcgaggtcttcctgaccgagctgcgggaggccacctggtacgagctgcgcatgaaggcc
tgcaacagcgccggctgcggcaacgagagcgcccagtttgccaccctggactacgatggc
agcaccatcccccccatcaagtcggcccaaggggagggcgatgacgtgaagaagctcttc
accatcgcctgccctgtgatcctggccacgctgggggtggctctgctcttcatcatccgc
aagaagaggaaggagaagaggctgaagaggctgcgagacgccaagagcttggctgagatg
ctgatcagcaagaataaccgcagcttcgacacgccggtgaagggccccccgcagggcccc
cgcctgcacatcgacatcccccgggtgcagctcctcatcgaggacaaggaaggcatcaag
cagctgggggacgacaaagccaccatcccggtgacggacacggagttcagccaggcggtg
aacccccagagcttctgcacgggggtctcactgcaccacccagcactgatccagaacaca
gggcccctcatcgacatgtccgacatccgccctggcaccacctcggactggaggacagtg
gggtcccagcacggcatcaccgtccccgagagcgacagctacagtgccagcctctcccag
gacacag
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integrated database retrieval system