Dryobates pubescens (Downy woodpecker): 104301283
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Entry
104301283 CDS
T08526
Symbol
LSM1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104301283 (LSM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpub03019
]
104301283 (LSM1)
Messenger RNA biogenesis [BR:
dpub03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104301283 (LSM1)
mRNA degradation factors
5'-3' decay
Lsm complex
104301283 (LSM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
104301283
NCBI-ProteinID:
XP_009899952
LinkDB
All DBs
Position
Unknown
AA seq
139 aa
AA seq
DB search
MKKADRDAAPTLGTRPAWGSSEKHLVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGK
KYGDIPRGIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEILEEQRVEQQAKQESEKLKV
QALKERGLAVPRADTLDEY
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagcggatcgggatgctgcccccaccctgggcacccgtcccgcctggggctcc
tcggagaagcatctggtcctgctgcgggacggccggacgctcattgggtacctgcgcagc
atcgaccagttcgcgaacttggtgctgcaccagactgtggaacgcatccacgtgggcaag
aagtatggagacatccctcgaggcatctttgttgtgagaggagagaatgtggttctgctg
ggggaaatagacctggagaaggagagcgacacacctctgcagcaggtctccatcgaggag
atcctggaggagcagcgtgtggagcagcaggccaagcaggagtcagagaagctgaaggtg
caggcactgaaggagcgtggcctggcggtgccccgggcagacaccctggacgagtactga
DBGET
integrated database retrieval system
