Dryobates pubescens (Downy woodpecker): 104301300
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Entry
104301300 CDS
T08526
Symbol
RIMS1
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpub04131
]
104301300 (RIMS1)
Membrane trafficking [BR:
dpub04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
104301300 (RIMS1)
Small GTPases and associated proteins
Rab associated proteins
104301300 (RIMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
FYVE_2
PDZ
PDZ_6
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-GeneID:
104301300
NCBI-ProteinID:
XP_009899969
LinkDB
All DBs
Position
Unknown
AA seq
1565 aa
AA seq
DB search
MSSSVGPRGPRPPTVPPPMQELPDLSHLTEEERNIIMAVMDRQKEEEEKEEAMLKRLHQQ
FESYKEQVRKIGEEARRYQGEHKDDAPTCGICHKTKFADGCGHLCSYCRTKFCARCGGRV
SLRSNNEDKVVMWVCNLCRKQQEILTKSGAWFFGSGPQPSPSQDGTLSDTATGGSSEAPR
EKRARLQERSRSQTPLSTAAAPAQETSPSTQPDRRKGAEAAQPAMGPDQKQVSSRSRSEP
PRERKKTMQVSDQSGKGLKSERKRVPKSSLPKEGAADERERKERQEGRRLEKGKSQDYPD
LPEKLEEGKVPDADRQRKEDELHTRYRSDPNLARCPVKAPPEEQQMRMHAKVSKARHERR
HSDVALPHTEVEEAEVPESHVGKRSQVQAAQDRKALAEAQRLCSVDRTGDVRVAVSKPFT
ARSPAAGRRSPAPVEHQESLRRQSRLDPSSALLMRKAKREKTETMLRNDSLSSDQSESVR
PAPPKPHRAKRGGKKRQMSVSSSEEEGASTPEYTSCEDVEIESESVSEKGDLDYYWLDPA
TWHSRETSPISSHPVTWQPSKEGDCLIGRVVLNKRTTMPKESGALLGLKVVGGKMTELGR
LGAFITKVKKGSLADVVGHLRAGDEVLEWNGKPLPGATNEEVYNIILESKSEPQVEIIVS
RPIGDIPRIPETSHPPLESSSSSFESQKMERPSISVISPTSPGALRDAPQVLPGQLSVKL
WYDKVGHQLIVNVLQATDLPPRVDGRPRNPYVKMYFLPDRSDKSKRRTKTVKKSLEPKWN
QTFLYSHVHRRDFRERMLEITVWDQPRVQEEESEFLGEILIELETALLDDEPHWYKLQTH
DESSLPLPQPSPFMPRRHVHGGESTSKKLQRSRPISDSDISDYDVDDGIGVVPPVGYRPG
SRDSQSSTLAVAAQERRPAHHRSRSVSPHRGDDQGRPRSRLPTVPLQRSLDEIHQMRRSR
SPTRHHDASRTPAEYRSRVVDSQYLSDQESELLMLPRAKRGRSAECLHTISELQPSLDRA
RSASTNCLRPDTSLHSPERERGRWSPSLERRRPTSPRIHIQHASPEDDRTRTLDSCIPKQ
DSVDHLSARPGAAQRQPRKVERYSSQKQTRKGSAAETERIHHQGSPSQSPPADTAFSSRR
GRQLPQVPVRSGSIEQASLVVEERTRQMKMKMHRYNQTSGSGSSQEHEREQYSKYKIQTE
QYRSCDNVSAKSSDSDVSDVSAISRTSSASRLSSTSFMSEQSERPRGRISTFTPKMQGRR
LGTSGRLTKSTSVSGEMYKLEQTDGSQSDTAVGMLGTGGKKRRSSLSAKVVAIVSRRSRS
TSQLSQTEAGSKKLKSTIQRSTETGMAAEMRSRMVRQPSRESTDGSINSYSSEGNLIFPG
VRLGADSQFSDFLDGLGPAQLVGRQTLATPAMGDIQIGMVDKKGQLEVEVIRARGLTQKP
GSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQTLVFDESPQGKVLQVIVWGDY
GRMDHKCFMGVAQILLEELDLSSVVIGWYKLFPPSSLVDPTLTPLTRRASQSSLESSTGP
PCIRS
NT seq
4698 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcggtggggccccgcggccctcgcccgcccacggtgccccccccaatgcag
gagctgcccgacctgagccacctgacagaggaggagaggaacattatcatggcagtgatg
gaccggcagaaagaagaggaggagaaagaagaggccatgctcaagaggttgcatcaacag
ttcgagagctataaagagcaagtaagaaagataggcgaagaagctcggcggtaccaggga
gagcacaaggacgatgctccgacgtgtgggatctgccacaaaacaaagtttgcagatggc
tgtggccatttgtgctcttactgccggaccaagttctgtgctcggtgcgggggtcgtgtc
tccctgcgatccaacaatgaggacaaagtggtgatgtgggtatgcaacttgtgccgcaag
cagcaagagatcctcaccaagtccggggcctggttcttcgggagcggaccgcagccctcg
cccagccaggacgggacgctgagcgacacggccacgggcggcagctcggaggcaccccgc
gagaagagagcgaggctgcaggagcgctccaggtcacagacgcccctgagcacggcggct
gccccggcacaggaaacctctcccagcacccagcccgaccggaggaaaggagcagaagcg
gcgcagccagcgatgggcccggaccaaaagcaagtttcctccaggtctagaagtgaacct
ccaagagagaggaagaagacaatgcaggtttcagaccagagtggcaaaggtttaaagagc
gagcgcaagcgcgtgccaaagtcctcccttcccaaggaaggagcagcagatgagagagag
cgcaaagagcggcaggaaggtagaaggctggagaaaggcaagtcacaggactacccagac
ttgccagagaaacttgaggaaggcaaggtgcctgatgctgacagacagaggaaggaagat
gaattgcatacccgttacaggagtgaccccaatctggcgcgatgccctgtaaaagctccc
cccgaggaacagcagatgcgcatgcatgccaaggtctctaaagcgcggcacgagcgaaga
cacagtgacgtagctttgcctcacacagaggtggaggaggccgaggtaccagagagtcac
gtagggaagcgctcccaggtgcaggcagctcaggacagaaaagctcttgcggaagcgcag
aggttgtgctctgtagacagaacaggggatgtaagagttgctgtgtctaaaccgttcact
gcccgtagcccagcagctggcaggcgtagcccggctcctgtagagcaccaggagtccctt
aggaggcagagccgcctcgatcctagctctgctcttctcatgcgaaaagcaaagcgggag
aaaacggagaccatgctaaggaatgattcccttagctccgaccagtcggaatctgtgcgg
ccggcccctcccaagcctcacagagcaaagagaggcggcaagaaaaggcagatgtcagtt
agtagctcagaggaagaaggggcctcaacaccagaatatactagctgtgaagatgtggag
atagaaagtgaaagtgtcagtgaaaaaggtgacttggattattactggctggatcctgcc
acgtggcacagcagggagacatcccccattagttcgcaccctgtgacgtggcagccttct
aaagagggagactgcttgatcgggcgtgtggtcctgaacaagagaacaaccatgcccaag
gagtcaggtgccctgctggggctgaaggttgttggtggcaaaatgacagagctgggacgc
ctcggtgccttcattaccaaagtgaagaaaggaagcttggctgatgtggtgggacacctc
agagcaggggatgaggtcctggagtggaatgggaaacccttgcctggagctacaaacgaa
gaagtttacaacattattttagaatccaaatcagaacctcaagttgaaattattgtttca
aggcctattggtgatattccaaggattcctgagacttctcaccccccgttagagtccagt
tcaagttcttttgaatctcagaagatggagaggccttccatttctgttatctctccgacc
agccctggagctctgcgggacgcgccacaagtccttccagggcagctttctgttaaactg
tggtacgacaaagtgggacatcagttgatagtcaacgttctgcaggcaacagatttgcca
ccacgagtggacggccgccccaggaacccctatgtgaagatgtatttcctcccggacaga
agtgacaagagtaaaaggaggaccaaaacagtaaagaaaagtctagagccaaagtggaac
caaacttttctctactcccacgtccaccgcagagactttcgagagcgaatgctcgaaatc
accgtctgggatcagccaagagtacaggaagaagagagtgaatttcttggagagattctt
atagagctggagacagcactcttagatgatgaaccacattggtataagctacagacacat
gatgaatcttcactacctctgcctcagccatcccctttcatgccaagaagacatgttcat
ggtggagaaagcactagcaaaaaactacaaagatctcggccaatcagtgatagtgacatc
tcagattatgatgttgatgatggtattggagttgttcctccagtaggttataggcctggc
agtagagacagccagtccagcacgctggcggtggccgcgcaggagcggcggccggcacac
caccgctcccgctccgtctctcctcaccgcggcgacgatcagggcaggccccgctcacgc
ttaccaactgtgcccttacagaggagcttagatgaaattcatcagatgagaagatcacgt
tctccaactagacaccatgatgcctccagaactccagctgagtacagatccagagtcgtg
gatagtcaatatttgtctgatcaagaaagtgagcttcttatgctgcccagagcaaagcga
ggaagaagtgcagagtgcctccataccatcagtgaactgcagccctcccttgacagggct
aggagtgctagtaccaactgcttgagaccagatactagtttgcattcaccagaacgagaa
aggggtagatggtccccctccctagagaggagacgacctactagtcccaggattcatatc
cagcatgcatctccggaggatgacagaacaaggacgctggactcttgcattccaaagcag
gacagtgtagaccacctaagtgctagacctggagcagcacagaggcagcccaggaaagtg
gaaagatacagcagccaaaagcaaactaggaaaggctccgcagctgaaacagaaagaata
catcaccaaggaagtccctcgcagtctcctcctgcagacacagccttcagcagtcgcagg
ggaaggcagctcccgcaggttccagtaaggagtggcagtatagagcaagcaagcttagta
gtggaggagcgaacgagacagatgaaaatgaaaatgcaccgttataatcagacatcaggg
tctggttctagccaagaacatgagcgtgagcaatattccaagtataagatacaaacagag
cagtacagaagttgtgataacgtctctgccaaatcatcagatagtgatgtcagtgacgtg
tcagccatttccagaaccagcagtgcctcacgcctcagcagcacaagttttatgtcagag
caatctgaacgcccccggggcagaatcagtacatttactcctaaaatgcaaggcagacgg
ctggggacttcagggagactgacaaagagcacaagtgtgagcggagagatgtataagctg
gagcagactgacgggagccagtcggacacggctgtcggcatgctgggaacaggtgggaag
aaaaggcgctccagcctgagtgccaaggtggtggccatagtgtctcgaaggagcagaagc
acatctcagcttagccaaacagaggctggcagcaagaagctgaagagcacgatccagagg
agcacagagacaggcatggcagcagagatgaggagtcgcatggtgcggcagccgagtcgc
gagtccaccgacggcagcatcaacagctacagctccgagggcaacttaatattccctggc
gtacggctgggcgccgacagtcagttcagcgacttcctggacggcctgggccccgcgcag
ctggtggggcggcaaacgctggcaaccccggccatgggtgacatccagattgggatggta
gataaaaagggccagttagaagtagaagtcattagagcccgcggcctcacacaaaaacct
ggctccaaatctaccccagctccctatgtcaaagtgtacttgctggagaacggagcgtgc
atagcgaagaagaagaccaggattgcacggaagacccttgatcccttgtaccaacagacc
ctggtttttgatgagagtccacaggggaaagtccttcaggtaatagtgtggggagactac
ggccgaatggaccacaaatgcttcatgggggttgcccagatccttctggaggagctggat
ctgtccagtgtggtaataggctggtataagctgttccctccctcatcactagtggatccc
accctgacccccctgactcgcagggcttcccagtcgtctctggagagttccactgggcct
ccctgcattaggtcgtag
DBGET
integrated database retrieval system
