Dryobates pubescens (Downy woodpecker): 104301314
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Entry
104301314 CDS
T08526
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin Fat 4-like
KO
K16669
protocadherin Fat 4
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dpub04515
]
104301314
Cell adhesion molecules [BR:
dpub04515
]
Cadherins
Cadherin related
104301314
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
RET_CLD1
Big_9
Cadherin_4
SGBP_BT4661-like
BKACE
Motif
Other DBs
NCBI-GeneID:
104301314
NCBI-ProteinID:
XP_009899987
LinkDB
All DBs
Position
Unknown
AA seq
1642 aa
AA seq
DB search
RIRYTIPEELGRGSLVGPLARDLGLSPAELPARKLRLSAEKQYFGLREESGELYVTERLD
REVMCGEAPTCSISFEALVHNPLNVFHIEVAIQDINDNAPRFLQEHFQLEINELTSPGAS
FAVGAAEDADVGRNSLQNYKLETNKYFEVEMKEKQDGSKFAELVLHRALDRESEQSLRLG
LTALGRGGPXGTAQLFINVTDANDNAPVFAQDRYRVSLREDSPPGSMVLNVSATDADAGS
NARITYGFGKMSAKVLQKFLLDAESGIITLQEALDFEDTRGYTLLVEARDGGGLVARCEV
DVEVLDVNDNVPEVILTSVSSPVPEDAPIGTVVALVKVRDRDAGDNGDVRCELSGEAPLS
LVASSGGSYKVVTASELDREQAAEHRVTLVARDRGSPALSSQATLVLEVSDVNDNAPVFE
EEVYSAYVAENNAAGASVLRVHARDADAGANGRISYRRWGRPARALLCYVLLYVWEAAWG
QMRYSVPEEMPKGSFVGDVAKDLGLQMAAPRDFSIVDRGRTQYFSLHGKTGHLVTAERID
REQLCESEQQCVLRCELIVEGEMKVYGVEVTITDINDNAPSFPEPEMQLRMSETRVAGSR
FPLIEAQDPDLGTNSVLSYELSGDEHFSLAEQEGPGGDRRPELVLAKALDREEAAFHDLL
LRASDGGEPPRTGTARIRVVVLDANDNAPMFSQAEYTVRVAEDVPVGSVLVTVIATDPDE
GMNGDVKYSLKKITKKGSSTFQLDSETGSITLVQSLDFEEGESYELEVQAHDGEGLFDTA
RVAITVTDVNDNVPKISVSSLLSDISEDAQSGTVVALLHVQDRDSGDNGQVQCSLDTGVP
FRLEKSFEDYYRVVTTRELDREEVSEYNVTVRGADGGDPPRSGTAQLFINVTDANDNAPV
FAQDRYRVKMREDLPPGSMVLNVSATDADAGSNARITYSFGKMPAKVLQKFVVDAESGII
TLQEALDFEETSTFSLAIEAKDGGGLVAHCEVEVEVLDVNDNAPEITVLSVSTPVSEDAP
IGTVVALVNVNDPDSGDNGQVRCELSGEAPLSLVASSGGLYKVVTASVLDREQAAQHRVT
LVARDRGSPALSSQAALVLEVSDVNDNAPVFEEEVYSAYVAENNAAGAPVLRVQARDADA
GANGRIGIRGGSTAAEMCASGRRWGRRARTLLCCVLLSVWESTWGQLRYSVPEEMPKGSF
VGDVAKDLGLKMTVMRLIERGRTQYFSLHGMTGHLVTAKRIDREQLCQLLEKCVLRCELI
VEGEMQVYEIEIEITDVNDNAPSFREPEMQLRMSELTALGSRFPLRDAQDPDSGPNSLKS
YELSGDEHFSLAVQADHGVDRRPELVLAKTLDREEAAFHELLLKARDGGEPSRTGTARIR
VIVLDANDNAPVFSAAEYTVHVPEDAPVGSTLLVVTATDIDEGINSHVKYSFHKISDRAS
ELFHLDDDTGEISLKKEIDFEEISTHELEIQAHDGGELSDTTKVVITVTDVNDNTPELTV
TSQLSEISEDAPSGTVVALLHVQDRDAGANGQVRCSLDTGIPFRLQSSRGSYYSVVTTRE
LDREEVSEYNVTVRAADTDSGSPSLSSSTVLNLRVLDVNDNAPVFSEASYSARLPENNAA
GALVLTVRARDADWGQNARVRY
NT seq
4927 nt
NT seq
+upstream
nt +downstream
nt
cggatccgctacaccattccagaggaactgggcagaggttcgctggtggggccgctagcg
cgggacctggggctgagcccggcagagctgccggcacgcaagctgcgtctcagcgccgag
aagcaatacttcggcttgagagaagagagcggagagctgtacgtgacggagagactggac
cgggaggtgatgtgcggagaggcgcccacctgctccatcagcttcgaggcgctggtgcac
aacccgctcaacgttttccacatcgaggtggccatccaggacatcaacgacaatgcgccg
cgcttccttcaggaacatttccaactggaaatcaacgaattgacttctcctggcgccagc
tttgctgtgggagcagccgaagacgcggatgtgggaaggaattccctgcagaactacaag
ctggagaccaacaagtactttgaggtggaaatgaaagagaagcaggatggcagcaaattc
gcggaactggtgctgcaccgagcgctggaccgggagagtgaacagagtctgcggctgggg
ctgactgcgctgggccggggcggccccngcggcaccgcccagctctttatcaatgtcacc
gacgccaacgacaacgcccccgtgttcgcgcaggaccggtaccgagtgagcctgagggag
gactcgccgccgggctcgatggtgctgaacgtctcggccaccgacgctgacgccggaagt
aacgcccgcatcacctacggcttcgggaaaatgtcggccaaggtgcttcagaagtttttg
ttggacgcagaaagcgggatcatcactttgcaggaagctctggactttgaggacacgcga
ggctacacgctgctggtggaggcgagagacgggggcggtctggtggcacggtgtgaagtg
gacgtggaggtgttggatgtaaacgacaacgtgccagaagtgatactgacgtcggtgtcg
agtccagttcccgaggatgctccgatcggcactgtggtggccctggtgaaagtgcgggac
cgcgatgccggggacaacggtgacgtgcggtgcgagctgtcgggagaggcgccactgtcg
ctcgtggcgtcgtcgggagggtcgtacaaggtggtgacggcgagcgagctggaccgggag
caggcagccgagcacagagtgacgctcgtggccagggacaggggcagcccggcgctgtcg
agtcaagcgacgctggtgctggaggtgtcggacgtgaacgacaacgcgccggtgttcgag
gaggaggtgtacagcgcctacgtggccgagaacaacgcggcgggagcgtcggtgctgcgc
gtgcacgcacgggacgcggacgcgggggccaacgggcgcatcagctaccggcgctggggt
cggccggcgcgggccctgctgtgctacgtcctgctgtacgtgtgggaggcagcatgggga
cagatgcgttactcggtgccggaggagatgcccaagggctccttcgtgggagacgtggcc
aaggacctggggctgcagatggcagcgccccgggacttcagcatcgtagaccgaggtagg
acgcagtatttctctctgcatgggaagacgggacatttggtgacggcggagaggatagat
agagagcagctgtgcgagagtgagcagcaatgcgtgctgcgctgtgagctgatagtggag
ggagaaatgaaagtgtacggagtggaagtgacaatcactgatattaatgacaacgcaccc
agcttcccagagccagaaatgcagctgagaatgagcgagacgagagtcgcaggatctcgg
tttcctctgatcgaagctcaggacccggacttgggaacaaattctgtcctgagctatgag
ctgagcggcgacgagcacttctcactggccgagcaggaaggccctggtggcgatcgccga
cccgagcttgtgctggccaaggcactggaccgggaggaggcggcgttccatgatctgctg
ctgagggcgagtgacggcggagagccgccgcgaacgggcacggcgcggatccgcgtggtt
gtgctggacgcgaacgacaacgcgcctatgttcagccaggcagagtacactgtgcgtgtg
gctgaggacgtgcccgtgggctctgtgctcgtcactgtcattgccaccgaccccgacgag
gggatgaacggggatgtgaaatactcgttgaagaaaatcaccaagaaaggctcatcgact
ttccagctagattctgaaacgggatctatcactctggtgcagagcttggatttcgaggaa
ggagaatcgtatgaactggaagtgcaggcacacgatggcgagggcctcttcgacactgcg
agggtcgcgattaccgttacagacgtcaatgacaatgtgcctaaaatttcagtgtcatcg
ttgctgagcgacatctctgaagacgcccagtcaggaacggtggtggccctgctgcacgta
caggaccgggactcaggagacaacggccaggtgcagtgctccctggacacgggagtcccg
ttccggctggagaagtcgtttgaggattattaccgcgtggtgacgacgagggagctggac
cgggaggaggtgtcggagtacaacgtgacggtgaggggggcggacggcggagacccgccc
cgcagcggcaccgcccagctctttatcaacgtcaccgacgccaacgacaacgcccccgtg
ttcgcgcaggaccggtaccgagtgaaaatgcgcgaggacttgcctccgggctcgatggtc
ctgaacgtctcggccaccgacgctgatgcaggaagtaacgcccggatcacctacagcttc
gggaaaatgccagccaaggtgcttcagaaatttgtagtggacgcagagagcgggatcatc
actttgcaggaagcgctggacttcgaggagacgagcacgtttagcttggccattgaagca
aaggacgggggcggactggtggcacactgtgaagtagaggtggaggtgctggatgtgaac
gacaatgcacccgaaatcaccgtgctgtccgtttcgactccagtttctgaggatgctccg
atcggtactgtggtggcgctggtgaacgtgaacgacccggactccggagacaatggtcag
gtgcgttgcgagctgtcgggagaggcgccgctgtcgctggtggcatcgtcgggcggttta
tacaaggtagtgacggcgagcgtgctggaccgggagcaagcagcccagcatcgggtgacg
ctggtggccagggacaggggcagcccggcgctgtcgagccaagcagcgctcgtgctggaa
gtgtcggacgtgaacgacaacgcgccggtgttcgaggaggaggtgtacagcgcctacgtg
gccgagaacaacgcggcgggagcgccggtgctgcgcgtgcaggcacgggacgccgacgcg
ggcgccaacgggcggatcgggatccgtggaggcagtacggcggctgagatgtgtgcttcg
gggaggcgctggggccggcgggcgcggactctgctgtgctgcgtcctgctgtcggtgtgg
gagtcgacatggggacagctgcgttactcggtacccgaggagatgcccaagggctccttc
gtaggcgacgtggccaaagatctggggctgaagatgacggtgatgcgcctcatagagcga
ggtaggacgcagtatttctctctgcacgggatgacgggacatttagtgacggcgaagagg
atagacagagagcagctgtgccagctgctggagaaatgcgtgctgcggtgtgagctgatt
gtggaaggagaaatgcaggtttatgaaatcgagatagagatcacggacgttaacgacaac
gctcccagctttcgagagccagaaatgcaactgagaatgagcgagctgacagcgctgggc
tcgcggtttcccctccgagatgcacaggatccggactcggggccaaattccctgaagagc
tatgagctgagcggtgacgagcacttctcgctggcagtgcaggccgaccacggcgtagat
cggcgtcccgagctggtgctagccaagacgctagaccgggaggaggcggcgtttcacgag
ctgttgctgaaggcgagggacggcggtgagccatcgaggacgggcacagcacggatccgc
gtgatagtgcttgatgcaaacgacaacgcgcccgtgttcagtgctgcagagtacaccgtg
catgtaccagaggacgcccccgtgggctccaccctcctcgtcgtcacggccactgatatc
gatgaggggataaacagccacgtgaaatacagtttccataaaatttcagacagagcatcg
gaacttttccaccttgatgacgatacaggagaaatatcccttaagaaggaaattgacttt
gaggaaatctccacacatgagctcgagatacaggcacatgatggaggagagctttctgac
actacgaaagtggtgattacagtgacagatgtcaatgacaacacacccgaattgacagtg
acttcacagctgagcgagatctctgaggacgccccttcgggaacggtggtggccttgctg
catgtgcaggaccgggacgcaggagccaacggccaggtgcggtgctccctggatacggga
attccgttccgactgcagagctctcgtggcagctattacagtgtggtgacgacgagggag
ctggaccgggaggaggtgtcggagtacaatgtgacggtgagggcagccgataccgatagc
gggtcgccgtcgctgtcgagcagcacggtgctgaacctcagggtgctggacgtcaacgac
aacgcgccggtgttcagcgaggcgagctacagcgcccggctgcccgagaacaacgcggcg
ggcgcgctggtgctgacggtgcgggcgcgggacgcggactggggtcagaacgcgcgcgtg
cggtacc
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integrated database retrieval system
