Dryobates pubescens (Downy woodpecker): 104301327
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Entry
104301327 CDS
T08526
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03022
Basal transcription factors
dpub03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104301327
09124 Replication and repair
03420 Nucleotide excision repair
104301327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpub03021
]
104301327
03400 DNA repair and recombination proteins [BR:
dpub03400
]
104301327
Transcription machinery [BR:
dpub03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
104301327
DNA repair and recombination proteins [BR:
dpub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
104301327
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
104301327
NCBI-ProteinID:
XP_009900002
UniProt:
A0A093GGE5
LinkDB
All DBs
Position
Unknown
AA seq
376 aa
AA seq
DB search
EILKEDESGSLKATIEDILFKAKRKRLSDHHGQVRLGMMRHLYVVVDGSRTMEDQDLKPN
RLTCTLKLLEYFVEEYFDQNPISQVGLIVTKSKRAEKMTELSGNSKKHITALKKAVDMNC
SGEPSLYNSLNLAMQTLKHMPAHTSREVLVVFSSLTTCDPANIYDLIKCLKAVKIRVSVI
GLSAEVRVCTVLARETGGTYHVILDESHYKELLMHHVSPPPASSNSECSLIRMGFPQHTT
ASASDQDAKPSFSMAQLENNSDPGLTLGGYFCPQCRAKYCELPVECKICGLTLVSAPHLA
RSYHHLFPLDSFQEVPLEEYQGQRHCQGCQGEMKDQNVYICKVCQSAFCVECDLFVHDTL
HCCPGCTHDHPVPVSL
NT seq
1132 nt
NT seq
+upstream
nt +downstream
nt
ggaaattcttaaggaggatgaatccggatccctgaaagcgacgatcgaggacattctttt
caaggcaaagaggaaaagactctctgaccaccatggacaagttcgacttggaatgatgcg
tcacctgtatgttgttgttgatggatcaagaacgatggaggaccaggatttaaaaccaaa
caggcttacctgcactctgaagctactggaatattttgttgaagaatactttgaccaaaa
tcctattagtcaggttggcttaattgtaaccaagagtaaaagagctgagaaaatgacaga
actttcaggtaactcaaaaaagcacataactgctctgaagaaagctgtggatatgaactg
cagtggagagccatctctatataattccctaaatttggccatgcagactttaaagcacat
gccagcacatacaagcagagaggttttggtagtcttcagcagcctgacaacatgtgatcc
agccaacatctatgacctgattaagtgtttaaaagcagttaagattagagtctctgtcat
tggcctgagtgctgaagtccgagtttgtacagtgcttgcccgagaaactggaggaaccta
ccatgttatcttagatgaaagccattacaaagagctcctgatgcatcatgttagtcctcc
acctgccagttcaaattctgagtgctcccttattcgaatgggctttcctcagcatactac
tgcctctgcatctgaccaggatgcaaagccgtccttcagcatggcgcaattggaaaacaa
cagtgacccaggtcttacactgggtgggtatttctgtccccagtgcagagccaaatactg
tgaactccctgtggaatgcaaaatctgtggtcttacgttagtgtctgctcctcacctggc
tcgctcttaccaccatttatttcccttggattccttccaggaagttcccctggaagagta
tcaggggcaacggcattgtcaaggctgccagggagaaatgaaagatcaaaatgtttacat
atgcaaagtgtgtcagagtgcattctgcgtggaatgtgatctctttgttcatgataccct
gcactgctgtccgggctgcactcatgaccaccctgttccggtgtccctatga
DBGET
integrated database retrieval system
