Dryobates pubescens (Downy woodpecker): 104301373
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Entry
104301373 CDS
T08526
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104301373 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpub03021
]
104301373 (SMARCA2)
03036 Chromosome and associated proteins [BR:
dpub03036
]
104301373 (SMARCA2)
Transcription machinery [BR:
dpub03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104301373 (SMARCA2)
Chromosome and associated proteins [BR:
dpub03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
104301373 (SMARCA2)
Chromatin remodeling factors
BAF complex
104301373 (SMARCA2)
PBAF complex
104301373 (SMARCA2)
GBAF(ncBAF) complex
104301373 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HSA
BRK
QLQ
ResIII
DEAD
Helicase_C
DUF2009
Motif
Other DBs
NCBI-GeneID:
104301373
NCBI-ProteinID:
XP_009900053
LinkDB
All DBs
Position
Unknown
AA seq
1097 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHPMPTM
GPTDYPQEGMHQMHKSIDGLHEKGMVEDVHCGSMKSMRPPHPGMGPPQSPMDQHSQGYMS
PHPSPLGAPEHVSSPMSGGGPTPPQMTPSQPGPIIPGDPQVMNQPNRGPSPFSSVQLHQL
RAQILAYKMLARGQPLPESLQLAVQGKRTLPGVQQQQPPSAFNRQSGIGLHTMSGSATGP
GPTPGMPGHAAAITTKTWTEGQAPDLSVSNAQQKLPAPPPSGRPSPAPAAVQPAAAIPGP
SLPQPPPGQPTPVVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLP
GSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLRE
ARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHA
NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVW
EHKQAQAAKEKKKRRRRKKKAEENAEGMASGLGPDGEPIDESSQMSDLPVKVTHTETGKV
LLGPEAPKASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEEDDEEESSRLETDEKILLDP
NSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAITERVEKQSSLLINGTL
KHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLST
LSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIR
WKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFK
SCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY
VIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQH
IEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMED
YFAFRNFLYLRLDGKLH
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcctacagaccctggcgccatgcctcatcctggtccatctcctggaccagga
ccttcgcctggaccgattctaggacctagcccaggaccagggccatctcctggctcagtt
cacagcatgatggggccaagtcctggtccacccagtgtcccacatccgatgccaacaatg
ggacctactgattatccacaggaaggcatgcatcaaatgcataagtctattgatggcttg
cacgagaaaggaatggttgaagatgttcactgtggctccatgaagagtatgcgacctcct
caccctggaatgggcccacctcagagtccaatggaccagcatagccaaggttatatgtct
ccacatccatctccactaggagccccagagcatgtgtccagtccaatgtctggaggaggt
ccaactccaccccagatgactcccagccagccaggacccattataccaggagacccgcaa
gtcatgaatcagcctaacagaggtccttcccctttcagctctgtacagctgcaccagctg
cgggctcagattctagcatacaaaatgttagctagaggtcagcctttaccagaaagcctc
cagcttgctgttcagggcaagaggactctgcctggtgttcaacagcagcagcctcccagt
gccttcaacagacagtctggtattggattacatacaatgagtggttctgcaactggacca
gggcctactcccgggatgcctgggcatgcagctgccattaccactaaaacttggactgaa
ggtcaagcaccagatctgagtgtctccaatgcacagcaaaagcttcctgcaccaccccct
agtgggaggccttctcctgcccctgctgctgtccagcctgctgctgccatccctggacct
tctctaccacagccaccacctggacaacctacacctgttgttcagctgcagcaaaagcag
aatcgcatcagccctatccagaagccacaaggattggatcctgttgaaatactccaagaa
cgtgaatatagacttcaggctcgaattgctcacagaatccaggagttggagaacttgcct
ggctctctaccccctgacctacgaaccaaagctacagtggagttgaaggcacttaggtta
ctgaatttccagcgccagctaagacaagaggtagtagcttgtatgcgtcgtgacacaaca
ctggagacagcactgaactccaaagcctacaaacgcagcaagcgtcagactttgagggag
gcccggatgacagaaaaacttgagaagcagcagaagatagagcaggagaggaagcgcagg
cagaagcatcaggaatacctgaacagcatattgcagcatgctaaggattttaaggagtac
caccgctcagtcgctggaaagattcagaaactttctaaagctgtagcaacttggcatgcc
aacactgagcgtgagcagaaaaaagaaacagaaagaattgagaaagaaagaatgaggaga
ctaatggctgaagatgaagaaggctaccgtaagctgattgaccaaaagaaagatagacgg
ctggcctacttgttgcagcaaacagatgagtatgtggctaacttgactaacctggtatgg
gagcataaacaggcacaggcagccaaagagaagaagaagaggaggagaaggaagaagaag
gctgaggaaaatgcagaaggaatggcatctggtcttggtcctgatggagagcccatagat
gagagcagtcagatgagtgatcttccagtcaaagtgactcacactgaaacagggaaagtc
cttcttggaccagaagcaccaaaagctagtcagctggatgcttggctggaaatgaaccct
ggctatgaagttgctcccaggtcagacagtgaagatgaaagtggttctgaatatgaggaa
gaggatgatgaagaagaatcaagcagattagaaacagatgagaagatactcctggatcct
aacagtgaggaagtttctgagaaagatgcaaagcaaatcattgagacagccaaacaagat
gtggatgatgaatacagcatgcaatatagtgctagagggtctcagtcctactataccgtt
gcacatgcgatcacagaaagggtggaaaagcaatcttctcttcttattaatggcactcta
aagcattatcagctgcagggactggaatggatggtttcactctataataacaatctgaat
ggaattttagcagatgaaatgggactgggaaagacaatacagactattgcactcatcact
tacctgatggagcacaaaagactcaacggcccctatctcatcattgttcctctttcgact
ttatccaattggacatatgaatttgacaaatgggctccttcagttgtgaagatatcttac
aagggtacacctgcaatgcgccgctcacttgttcctcagcttcgaagtggaaaattcaat
gttcttttaactacttatgagtacatcataaaagacaaacatattcttgctaagattcga
tggaaatacatgatagtagatgaaggccatcgaatgaagaaccatcactgcaagctgact
caagtcttgaatactcactatgtggcccctaggcgaatactgctgactgggactccatta
cagaacaagctgcctgaactttgggctcttctcaatttcctcctcccaaccattttcaag
agctgtagcacctttgaacagtggttcaatgctccatttgccatgactggagaaagggtg
gacttaaatgaggaagaaactattctgatcatccgtcgtctccataaagtgctccgaccc
ttcttgctgagaagattgaagaaagaggttgagtctcaactgccagaaaaggtggaatat
gtgatcaaatgtgatatgtcagctcttcagaagatcctgtaccgtcacatgcaagccaag
ggaatccttctcacagatggttctgagaaagacaagaaggggaaaggtggggcaaaaact
ctgatgaacacgatcatgcagttgcgcaagatatgcaatcacccatacatgtttcagcac
attgaggagtcctttgctgaacatttgggctactcaaatggtgtcatcaatggggccgaa
ctttatcgtgcctcaggaaagtttgagctactcgatcgtattctacccaagctacgagct
actaaccatcgtgtgcttcttttctgtcaaatgacatcactcatgaccattatggaagac
tactttgcatttcgaaattttctctacctgcgtcttgatggtaagctacat
DBGET
integrated database retrieval system
