Dryobates pubescens (Downy woodpecker): 104301416
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Entry
104301416 CDS
T08526
Symbol
ZNFX1
Name
(RefSeq) NFX1-type zinc finger-containing protein 1
KO
K27391
NFX1-type zinc finger-containing protein 1
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
104301416 (ZNFX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
ZnF_RZ-type
AAA_19
AAA_30
ResIII
SLFN-g3_helicase
DEAD
PhoH
nSTAND3
AAA_16
ATP-synt_E_2
Motif
Other DBs
NCBI-GeneID:
104301416
NCBI-ProteinID:
XP_009900098
LinkDB
All DBs
Position
Unknown
AA seq
1953 aa
AA seq
DB search
MEGSEQEPCSRQPRAGEEGHADDWDPIFIQESKTRTNNTTGQATELGESSQASICALLRE
QRKGRFPGSWIPQSSKNEPRNQSGQANSRTAGCCNKQQNEGWRMRHQGGEARGKGRGSWN
KQEKEGEGRSCQGRPAQEGARGWRGGQENEGRGRRMQHWEKPRFYQNPSPGGAQLSEQPR
QVRRIGYKFLEGLLLKDPSEVAITLASSSGLKELLSETAMKPNFVQLICQVLQKACSSRM
DRQSVQHFLGVVKESNFLKICLPQYVSNMATEADPAVRRQYPVHISNIVSLLQDLVSIFP
ASSVQKISILLTVLSASVNVLKDSGVDITEETEKNLNKVQMLMQHLQKKRREGTLGADNS
PLVQPQTDDQAESYRAMTIYPTYDEVHHGKRPFLRPNVVSGRYESTTIYLDTHFRLLRED
FIRPLREGIMELLRSFEERGLRRKKFDDIRIYFDAHILTPVCTPSGVVYKVQFDVTPLKF
VRWQNSKRLLYGSLICMSKDRFETCLFATVSNRDSAELARGVVQLCFNAQSQALLAEVQP
SDSFLMVETTAYFEAYRHVLEGLQEIQEEDVPFQKYIVECDVQVKKPAYLTMDSVYDFAP
LVRVPHADEQMHPDGQGKKSFCVLDPKQWPSTETLRLDESQLQALRLALTKELAIIQGPP
GTGKTYVGLKIVQALLTNNHNWQTLGQRSPILIVCYTNHALDQFLEGIYKFQRNGMVRIG
GRSSSKVLEQFTLKELRKSCGLRYNLPAHLRRAYMNITSVMKQAEESLQEGVEHLECTTR
GVVHERQLRACIAPQHWDSLMRAVDDDEFLSAPLYSRHSVILEWLGLGATIFTQNAAEDI
EAENSGGQQQREEEWEDESEEELVEILEEADLIQADRVIEDEEVVKPQRRKKEEYRAVPK
LSKVLFALKLEDEEEETQLQEEAMQWEVTAAQRKKMKQRMKVELCKLNAMTELEARAIQD
LWLLDLNSRWRLYRLWLQTYQGNIRESILQYAQQYQAAAERLAELRLQEDLYILRGARVV
GMTTTGAAKYRQILQKVEPRIVIVEEAAEVLEAHTITTLSKACQHLILIGDHQQLQPSAN
VYDLARNFSLEVSLFERLVKVDFPFVCLKYQHRMRPEIAQLLCPHIYSELENHPSVLQYE
NIKGVSSNLFFVEHEFLEQEIQEGKSHQNPHEAHFVVELCKYFLYQGYQPSQITILTTYT
GQLFCLQKLMPAKTFAGVKVHAVDKYQGEENDIILLSLVRSNKAERPGFLQIPNRICVAL
SRAKKGLYCIGNMRMLGKVPLWGKIIQTLRANGHIGHSLVLCCQNHPETKTLVSTAADFS
QVPEGGCTRPCEFRLSCGHVCTRVCHPYDLEHKEFQCLKPCQKVLCADGHRCPRSCFEEC
KPCQVMVEKTISKCGHLQMVPCSVPESEFPCQEPCQKLLGCGHTCNMFCGQECTKYCPEV
VTAVLKCGHAQQVKCWITEEIKHGRVVRCKAKCTATLQCGHVCSGSCHTCFGGRFHEQCK
SPCKRFLVCSHKCQQPCTSECPPCQMECQNQCVHSRCKKKCGESCFPCAEPCEWQCQHYQ
CTSLCSEPCNRPRCNVPCAELLRCGHPCAGLCGEPCPKKCLVCDREELTQIFFGFEEDPD
ARFVQLEDCGHVFESQGLDHYMDEDDDVVKLKVCPMCQTPIRKNLRYGTIVKRRLDEIEK
VKEKIQGPAQEIEANRQRLQVALAGSDVLKRNLLQKYFVLENKLSAPDLSTRSLGLIENQ
LNFYQRVADLTASLSKIDASERQGLKKQLEEVQQWLDKKRLSFSGQELSDLQAEIQRLTY
LLSLLARCEAAKRMITPALAAEIAYVRECLEGTNKFTEQDEAAVKAALDWLWRALPASGL
GISEAERVQIVSAIGCPRGHWFKCKNGHIYVIGECGGAMERSRCPECHEVIGGANHSLDS
TNSLAPEMDGATHAAWSETANNLLNFEDLQQLL
NT seq
5862 nt
NT seq
+upstream
nt +downstream
nt
atggagggctccgagcaggagccttgctcccggcagccccgagctggagaagaagggcat
gcagatgactgggatcctatctttatacaagaaagcaaaaccagaacaaataatacaaca
ggccaggcaactgagttaggagaaagcagccaagccagtatttgtgctcttctacgtgag
caaagaaaggggagatttcctggctcgtggatacctcaatcaagcaaaaatgaaccaaga
aaccaaagtggacaggccaacagcagaaccgcaggatgctgcaataaacagcagaatgag
ggatggaggatgaggcatcaaggtggagaagcacgtgggaagggcagagggtcctggaat
aagcaagaaaaggagggtgagggaaggagttgtcaaggtagaccagcccaggaaggagct
agagggtggaggggtgggcaggaaaatgaaggtagaggaaggagaatgcagcactgggag
aagcctcgtttctaccagaacccatccccaggtggtgcccagctcagtgagcagcctcgg
caagtcagaaggattggctataaattcctagaaggtctcctcttgaaagacccttcagaa
gtcgccatcacgctcgcttccagttcaggcttgaaggagctgctttctgaaacagccatg
aaaccgaatttcgttcagctcatttgccaggtgcttcaaaaagcttgcagttcccgaatg
gacagacagagtgtgcaacactttcttggagttgtgaaagagtccaacttcctcaaaatc
tgtttgccgcagtatgtgtctaacatggcaacagaagcagaccccgctgtgcgccggcag
taccctgtgcatatcagcaacatcgtttcacttcttcaggacctggtcagtattttccca
gccagctctgtgcagaaaatctccatccttttgacagtcttgtcagcatctgtcaacgtc
ctgaaagattctggtgtggacatcacagaagaaacggagaagaatctaaataaagtgcag
atgctcatgcagcatctgcagaagaagagacgcgagggcacgctgggggctgataacagt
cctctcgtgcagcctcagactgatgatcaagcagaaagctatcgtgccatgaccatttat
ccaacctatgatgaggtgcaccacggcaagaggccctttctgcgccccaatgttgtttct
gggaggtatgagagcaccaccatttacctcgacacccatttccggctcttgagagaagac
ttcatcaggcccttaagggaaggcatcatggagctcttgcggagcttcgaggagagaggt
ttgagaaggaagaagtttgatgacatcaggatctactttgacgcacacattctcacccct
gtctgcaccccgtccggtgtggtttacaaggtgcagtttgacgtcacccctctgaagttc
gtgcgctggcagaactccaagcggctgctgtacggttccctcatctgcatgtccaaggac
cgctttgaaacctgcctgttcgccaccgtttcgaaccgggacagcgcagagcttgcccgt
ggggttgtgcagctgtgtttcaatgctcagagccaggcgttgctggccgaggttcagccc
tcggactccttcctcatggtagagacaactgcctactttgaggcctatcgacacgtgttg
gaagggctgcaggagatccaggaagaagatgtcccgttccagaagtacattgtggaatgt
gatgtgcaggtgaagaagccagcctacctgacaatggactctgtctatgactttgcaccc
ttggtcagagttcctcatgcagatgaacagatgcaccctgacgggcagggaaagaaaagt
ttctgtgttctagatcccaagcagtggccttcaacggaaaccttgagattagatgagtct
cagttgcaggcgttgagacttgcactcaccaaggagctggctattatccaaggacctcct
gggaccgggaagacttacgtgggattgaagattgttcaggctctcttgactaataatcac
aactggcaaacccttggccagaggtctcccatccttatagtctgctacactaaccatgca
ctggatcagttcttagaaggaatatacaagtttcagaggaatgggatggttcgcatcggg
ggcagaagcagcagtaaggtcttggagcaattcaccttgaaggagctgaggaagagctgt
gggctccggtacaacttgccagcacacctccgcagagcctacatgaacatcaccagtgtg
atgaagcaggctgaggagtcactccaagagggagtggagcacttggagtgcacgacacgt
ggagttgtgcatgagcgccagctgcgggcatgcattgcaccccagcactgggacagcctg
atgagagctgtggatgatgatgagtttcttagtgctccactgtactcacgacactcagtg
attctggagtggctgggccttggtgcaactatcttcacccagaatgctgctgaggatata
gaggctgagaattcaggtggtcagcagcagagagaggaggaatgggaagatgaatcagaa
gaggagcttgtggagatcctagaggaagctgacctgattcaagctgacagagtgattgag
gatgaagaggtagtaaagcctcagagaaggaagaaggaagagtacagagctgttcctaag
ctatccaaagtgctgtttgctctgaagctggaggatgaggaagaagaaacccagctacaa
gaggaggctatgcagtgggaggtcactgctgcccagaggaagaaaatgaaacagaggatg
aaggttgagctctgtaaactgaatgccatgacagagttagaggccagggctattcaggat
ctgtggctacttgacctgaactcccgctggcggctttacaggctttggctgcagacctat
caaggaaacattcgagagagtattctacaatatgcccagcagtaccaggcagcagcagaa
aggctggcagagctgaggctgcaggaggatctctacattctcaggggggccagagttgtg
gggatgaccactacaggggctgccaaataccgtcagatcctgcagaaagttgagccccga
attgtcattgtagaagaggcagcagaggtgcttgaggctcacaccattaccactctgagt
aaagcttgccagcatcttatcctcattggagatcatcagcagctgcagcctagtgcaaat
gtctatgacctggccagaaacttcagtttggaagtctccctcttcgaacggctggtgaaa
gtcgatttcccctttgtctgtctgaagtaccagcaccgcatgcgccctgaaatcgctcag
cttctctgtcctcacatatactcggagctggagaaccatccctctgtgctgcagtatgag
aacataaaaggggtctcatctaacctcttctttgtggagcatgagtttcttgagcaagag
atccaggaagggaaaagccaccagaacccacacgaggctcactttgtagtggaactgtgc
aaatacttcttgtatcagggttatcaaccttctcagatcaccattctcactacttacact
ggacagctcttctgtctgcagaagctgatgccagccaagacctttgcaggtgtgaaggtt
catgcagtagataagtaccagggggaggagaatgacattattctgctgtccctcgtgcga
agcaacaaagcggagagacctggcttcctccagatccctaatcggatatgtgtagcatta
tccagagctaagaaggggctgtattgtattgggaatatgagaatgctgggcaaggttcct
ctctggggcaagatcattcaaacccttcgagccaacggtcacattggccactcattggtg
ctttgctgtcaaaaccaccccgaaaccaagactctggtatcgacagcggcagacttcagc
caagtcccagaaggaggctgcactcgcccctgtgagttcaggctgagctgtggacatgtt
tgcacaagggtctgtcacccctacgacttagagcacaaagagtttcagtgtctgaagcct
tgtcaaaaggtgctttgtgcagacgggcaccgctgtccccggtcatgttttgaggagtgt
aaaccatgccaggtgatggtagagaaaactatttccaagtgtggccacctgcagatggtg
ccctgctctgtaccagagagtgagtttccttgccaagaaccttgccagaagttgttgggt
tgtgggcacacatgcaacatgttctgcgggcaagaatgcaccaagtactgtcctgaagtg
gttacagctgtgctgaaatgtggccatgcccagcaagttaaatgctggattactgaggag
ataaaacatgggagggttgtgcggtgtaaggctaagtgtactgccaccctgcagtgtggc
catgtgtgctcaggttcctgtcatacctgctttggaggaagatttcatgagcagtgtaag
agcccctgcaagcgcttcttggtctgctcccacaagtgccagcagccctgtacttcagag
tgccctccctgccagatggaatgtcagaaccagtgtgtccacagcaggtgcaagaagaag
tgtggggagagctgcttcccgtgtgctgagccctgtgagtggcagtgtcagcactaccag
tgcaccagtctgtgctctgaaccgtgcaacaggcctcgctgcaacgtgccctgcgctgag
ctgctccgctgtgggcatccttgcgctgggttgtgtggagagccttgcccgaagaagtgc
ctcgtctgtgaccgtgaggaactcacccagatcttttttggctttgaggaagacccagat
gctcgatttgtacagcttgaagactgtggccacgtctttgagtcccaaggccttgaccat
tatatggacgaggacgatgacgtcgtcaagctgaaggtgtgccctatgtgtcagacaccg
atcagaaagaacctgaggtatggcaccatagtgaagaggcgcctggacgagatagagaag
gtgaaagagaaaatccaaggtccagcccaggaaattgaggctaacagacaaagactgcag
gtcgcactggcaggcagtgatgttctgaagagaaatctacttcagaagtactttgtgcta
gaaaataaactaagtgctcctgatctctccacaaggagccttggactaattgagaaccag
cttaacttctaccagcgtgtagcagacctaaccgcttctctgagcaaaattgatgcaagt
gagaggcaagggctgaagaagcagctggaggaagtgcagcagtggctggacaagaagcgc
ctcagtttttcaggacaggagctgtctgacctgcaggccgagatccagaggctgacctat
ttgctgagcctgctggcaaggtgtgaagctgcaaagaggatgatcaccccagcgctggca
gcagagattgcctatgtccgtgagtgcctggaagggacaaataaattcaccgagcaggat
gaggctgcggtgaaagctgcgctggattggctctggcgtgccttgcctgcttcggggctg
ggcatctcggaagcggagcgggtgcagattgtcagcgccatcggctgcccccgcgggcac
tggttcaagtgcaaaaacgggcacatctacgtgatcggggagtgtgggggggccatggaa
aggagccggtgccccgaatgccacgaagtcatcgggggcgcaaaccactccctggacagc
accaacagtctcgctcctgagatggacggagcgacccacgcagcctggtccgagaccgcc
aacaacctgctcaacttcgaggacctgcagcagctgctctag
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integrated database retrieval system
