Dryobates pubescens (Downy woodpecker): 104301511
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Entry
104301511 CDS
T08526
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpub03041
]
104301511 (RBM39)
Spliceosome [BR:
dpub03041
]
Common components
Common spliceosomal components
General mRNP proteins
104301511 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
104301511
NCBI-ProteinID:
XP_009900192
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHDRKRSRSKDRKRSRD
RERKKSRSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNIAIRGKIGLPHSMKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEITFNVDLQTRLSQQNEGKVLAAAASVQP
LATQCFQLSNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHSLFPDSMTATQLLVPVRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatattgatattgaagcaatgcttgaagctccttacaagaaggatgagaac
aaattgagcagtgccaatggccacgaagagcgcagcaagaagagaaaaaagagcaagagc
cgaagtcgaagccacgacaggaagaggagcagaagtaaggatcgcaaacggagccgcgat
cgggaaaggaaaaagagcagaagccgggaaaggaagcggagcaggagcaaagagcgcagg
cgcagccgttctaggagtagggatcgcagattcagaggccgctacagaagtccctattct
ggtccaaaattcaacattgccatcagagggaagattggtctgcctcacagcatgaaatta
agcagacgacgctccagaagcaaaagtcccttcagaaaagacaagagccctgttagagaa
cctattgataatcttacccctgaagagagggatgctcgaacagtgttctgcatgcagctg
gctgcaagaattcggccgagagacctggaagaatttttctctacagtagggaaggttcgt
gatgtgcgaatgatttcagataggaattccaggcgttcaaagggaattgcttatgtagaa
tttgttgatgttagctcagtgcccctggcaataggactgactggacagagagtcctgggt
gtaccaatcatagtgcaagcatcacaggcagagaagaacagagcagcagcgatggcaaat
aacctccaaaagggcagtgcaggtcctatgaggctctatgtgggatcattacacttcaac
ataactgaagatatgcttcgaggaatttttgagccctttggcaggattgaaagcattcag
ctgatgatggacagtgaaactggacgctcaaaaggatacggatttattacgttctcagac
tctgagtgtgccaaaaaggccttggaacaactcaatggatttgagctggctggtaggcca
atgaaagttggacatgtaactgagcgcactgacgcttccagtgccagctcgtttttggac
agtgacgagttggaacggactggaattgacctggggacaactgggcgccttcagctgatg
gcgaggctcgcggaaggtactggtttgcagattccccccgctgcgcagcaagctctgcag
atgagcggatccttggcatttggagctgtggcagaaatcacctttaatgtagatttgcag
acgagactatctcagcagaatgaaggtaaagttctggctgcagctgcttctgtacaaccc
cttgcaacgcagtgcttccagctttccaacatgtttaatcctcaaactgaagaagaagct
ggctgggatacagaaattaaagatgatgtgattgaggaatgtaacaaacatggaggagtt
atccacatctatgtagacaaaaactcggctcagggcaatgtgtacgtcaaatgtccttcc
atcgctgctgccatcgcggctgtgaacgcgctgcatgggaggtggtttgcaggcaagatg
attacagcagcatatgtacctcttccaacgtaccacagccttttcccagactctatgact
gcaacccaactactggttcctgttcgacgatga
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