KEGG   Dryobates pubescens (Downy woodpecker): 104301552
Entry
104301552         CDS       T08526                                 
Symbol
KDM4A
Name
(RefSeq) lysine-specific demethylase 4A
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
dpub  Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:dpub00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dpub03036]
    104301552 (KDM4A)
Enzymes [BR:dpub01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     104301552 (KDM4A)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     104301552 (KDM4A)
Chromosome and associated proteins [BR:dpub03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    104301552 (KDM4A)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 JmjN zf-HC5HC2H PHD DUF7141 LBR_tudor DUF4537 Rad9_Rad53_bind Tudor_5
Other DBs
NCBI-GeneID: 104301552
NCBI-ProteinID: XP_009900242
LinkDB
Position
Unknown
AA seq 1059 aa
MASDLESLNPSARIMTFRPTMEEFRDFSRYIAYVESQGAHRAGLAKIVPPKEWKPRRGYD
DIDELVIPAPIQQVVTGQSGLFTQYNIQKKAMTVREFRRIANSDKYCTPRYTDFEDLERK
YWKNLTFNAPIYGADVNGTLYDKHIDVWNIGRLNTILDIVENESGITIEGVNTPYLYFGM
WKTSFAWHTEDMDLYSINYLHFGEPKSWYSIPPEHGKRLERLAKGFFPGSAQSCEAFLRH
KMTLISPSILKKYGIPFDKVTQEAGEFMITFPYSYHAGFNHGFNCAESTNFATLRWIEYG
KQSVLCSCRKDMVKISMDVFVRKYQPDRYKLWKAGKDVTVIDHALPTPEAAEFLKGDLMQ
KVKNGKQCVEEMETGEMCKEEADGDEAKSIPKHRIGTKRHRVCLEVPQEVSESEAFPKEE
LSSTQYEADVAQPRERPLSQPVQQSGQRLKLADRVDTAKFQELKTVKLEEEEEEEQEAAA
LDLSISHASNSSSVLPTSKQSAASSVQSSSPAHSGSSDSESVDLLAKRTLPGPARVLTVH
SYAKGDASGSDNEQASGKKASATSSVNEQELAEVAKEYIRSMKESKKSKGRRQPLSKLPR
HHPLLVKDCISDDETSEQLTPEEEAEETEAWAKPLSQLWQNRPPNFEAEKEYNQTMAQQS
PYCAVCMLFQTYQAECGGSSQNSGEAPAAVDGKIRTKPLIPEMCFTATGCSTDLNLSTPY
LEEDGTSVLITCKNCHVCVHASCYGVSPDKATEDWMCSRCTENALEEDCCLCSLRGGALQ
RANDDKWVHVMCAVGVLEAKFVNIADRSPVDVGKIPLQRFRLKCIFCKKRRKRVAGCCVQ
CSHGRCPTSFHVSCAQAAGVMMQPDDWPFVVFITCFRHKTPSQAERAKAALQDLSPGQIV
ISKHKNGRFYQCEVVSLAKETFYEVNFDDGSFSDNLYPEDIVSRDCLQLGPPAEGEVVQV
RWTDGQVYGAKFVASHAIQMYQVEFEDGSQLMVKRDDVYTLEEELPKRVKSRLSIASDMR
FTEIFAEKEVRQERKRQRVINSRYREDYIEPALYRAIME
NT seq 3180 nt   +upstreamnt  +downstreamnt
atggcctcggacctggagagcctcaaccctagcgcgcggatcatgaccttccgccccacc
atggaggagttccgggacttcagccgttacatcgcttacgtggagtctcagggcgcccac
cgcgccgggctggccaagattgtccctccgaaggagtggaagcctcggcggggctacgat
gacatcgacgagctggtcatcccggcgcccatccagcaggtggtgacggggcagtccggc
ctcttcacccagtacaacattcagaagaaggccatgacggtccgcgagttcaggaggatc
gccaacagcgacaagtactgcacgccccgctacacagactttgaagaccttgaacgaaaa
tactggaagaacctgacattcaatgcccctatctacggtgctgatgttaatggcacactt
tacgacaagcacatagatgtgtggaatattggcagattgaacacgatcctggatattgtg
gagaatgaaagtggcataaccatcgaaggagtgaatactccttacctgtattttggcatg
tggaaaacctcctttgcctggcacaccgaggacatggatctctacagtattaattacttg
cattttggggagcccaaatcatggtactctatccctccagagcatgggaagcgactggag
agacttgcaaaaggtttcttcccaggaagtgcccaaagctgtgaagcgtttctgcgtcac
aagatgactctcatctctccatcgattctgaagaaatacggcatcccttttgataaggtg
acacaggaggctggggagttcatgataacctttccttatagctaccatgctggctttaat
catggcttcaactgtgctgagtctaccaactttgctactctacgatggatcgagtatggg
aagcagtctgtactgtgctcttgtcggaaggacatggtgaagatctccatggatgtgttt
gtgaggaaataccagccagaccggtacaagctttggaaagcggggaaggacgtcactgtc
atcgaccatgctcttccaactccagaggcagcagagttccttaaaggagatctcatgcaa
aaagtcaagaatgggaaacagtgtgttgaggagatggaaacaggagagatgtgtaaagaa
gaggcagacggggatgaggcaaaaagcatccccaagcatcgcataggaaccaaaaggcac
agggtctgcctcgaagttcctcaggaggtgagtgagagcgaggccttccccaaggaggag
ctgagctccacacagtatgaagcagacgtggcgcagcctcgtgagagacccttgagtcag
cctgtgcagcaaagtggacaaaggctcaagcttgcagatcgtgtggacacagccaaattt
caagaactgaagacagtgaagcttgaggaggaggaagaggaagaacaagaagcagctgca
ttggatctctccatttcacatgcttcaaattccagttcagtgttgccaacttcaaagcag
agtgcagcatccagcgttcagtccagctcgcctgcccattctgggtcctcagactccgaa
tcagttgatctgttggcaaaacgaactcttcccgggccagctcgagtgcttacagtccat
agctacgctaaaggagatgccagcggatccgacaatgaacaagcttcgggaaagaaagcc
agtgccaccagcagcgtgaatgagcaagaactggcagaggtagcaaaggagtacataagg
tcaatgaaggagagtaagaagtccaaaggtcgtcgccagccattgagcaagctcccacgc
catcacccactcttggttaaagactgcattagtgatgatgagacatcagagcaactaact
cctgaagaagaggctgaggagacagaagcatgggccaagccacttagccagctgtggcag
aatcgacctccaaattttgaagcagaaaaagaatacaatcagaccatggctcagcagtct
ccttactgtgctgtgtgcatgctcttccagacataccaggcagagtgtggaggcagcagt
cagaactctggagaagctccagctgctgtggatgggaagatccgaaccaaacccctgatt
cctgaaatgtgctttactgcaactggctgcagcactgacctcaatctttcaaccccctac
ttagaggaagatggaacgagtgtactcatcacatgcaagaactgccatgtctgtgttcat
gcaagttgttatggtgtatcccctgacaaggctactgaagactggatgtgctccaggtgt
acagaaaatgccttagaagaggactgctgtttgtgttcattacgaggaggagcactgcag
agagccaatgatgacaagtgggttcatgtgatgtgtgctgtgggtgtactggaggcaaaa
tttgtgaacattgcagaccggagtcctgtagacgttggcaaaattcccctgcaacgtttc
agactgaaatgcatcttttgcaagaaacgaagaaagagagttgcaggttgctgtgtacag
tgctcacatggtcgatgccccacgtcctttcatgtcagctgtgcccaagcagcaggggtc
atgatgcagcctgatgactggccatttgttgtctttattacctgcttcagacataagact
ccatctcaggcagagcgagctaaggctgcactgcaggatctgtcaccaggacagatagtc
atcagtaagcacaagaatggtcgcttctatcagtgtgaagtggtcagccttgcaaaggaa
actttctacgaggtcaactttgatgatggttccttcagtgataacctgtacccagaggac
attgtgagtcgagactgtcttcagttgggtccccctgctgaaggggaagttgtgcaggtg
agatggacagatggacaagtttatggagccaagtttgtcgcatcacatgccatccagatg
taccaggtggaatttgaagatgggtctcagctgatggtgaaaagggatgatgtgtatact
cttgaagaggagcttcctaagagagtgaagtcaaggctgtcaatagcatcagatatgcgc
ttcacagagatctttgcagagaaggaggtcaggcaagagaggaagagacaaagagtgatc
aattcacgctaccgtgaagattacattgaacctgcgttgtaccgggccatcatggagtaa

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