Dryobates pubescens (Downy woodpecker): 104301644
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Entry
104301644 CDS
T08526
Symbol
PNPT1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104301644 (PNPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpub03019
]
104301644 (PNPT1)
03016 Transfer RNA biogenesis [BR:
dpub03016
]
104301644 (PNPT1)
Enzymes [BR:
dpub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
104301644 (PNPT1)
Messenger RNA biogenesis [BR:
dpub03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
104301644 (PNPT1)
Transfer RNA biogenesis [BR:
dpub03016
]
Prokaryotic type
tRNA degradation factors
104301644 (PNPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
OAF_N
Motif
Other DBs
NCBI-GeneID:
104301644
NCBI-ProteinID:
XP_009900351
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MEVSSGKLARFADGSAVVQLGDTAVMVTAVSKTKPSASQFMPLVVDYRQKAAAAGRIPTN
YLRRELGSTDKEILTSRVIDRSIRPLFPAGYFYDTQILCNLLAVDGVNDPDILAINGASA
ALALSDIPWNGPIGAVRVGLVDGETVINPTRKQMSSSALNLVVAGAAQNQVVMLEATAEN
ILQQDFCHAIKVGVKQTQQIIQGIQQLVKERGVVKRTVQKLFIAPEEIVECAKKFAFDKI
YAVFTDSSHDKISRDEAINKIRLETEEQLKEKFPEAEPYEIMESFNVVSKDIFRNLVLNE
YRRCDGRDLTSLRDIKCEVNMFKMLHGSALFQRGQTQVLCTVTFDSLESSVKSDVISTAV
SGIKDKNFMLHYEFPPYATNEIGKVTGMNRRELGHGALAERALKPIIPQDFPFTIRVTSE
VLESNGSSSMASACGGSLALMDAGVPVSNAVAGVAIGLITKCNLEKGDIEDYRLLTDILG
IEDYYGDMDFKMAGTNKGVTALQVDLKLPGIPMKIVMEAIQQATAAKREILQIMNQTLAK
PRPNRKESGPVVETIHVPLSKRLRFVGPGAYNLKKLQAQTGVTVSQLDEETYSVFAPTPS
AMHEAREFIREICKDDQEVNLEFGAVYTATITEIRDSGVMVKLYPNMTPVLLHNSQLDQR
KIKHPSALGLEVGQEIQVKYFGRDPTDGRMRLSRKILQSPATTVLKTLTDKNSIVLGGTV
PQSSTSSQ
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgtcttctggaaaacttgctcgatttgcagatggttctgctgttgttcagcta
ggtgatacagcagtaatggtcacagcagtcagtaaaactaagccttctgcatctcagttt
atgccattagtggttgactatcgtcagaaagctgctgcagcaggaagaattcctacaaac
tatctaagaagagagcttggttccactgataaggaaattcttacaagtagagtaatagat
cggtcaatcagaccactttttccagcaggctacttttatgacacacagatcctttgtaat
cttttagcagtagatggtgtcaatgatcctgatattctggcaattaatggagcctcagca
gcacttgcattgtctgatatcccatggaatgggcctattggtgcagtaagggtggggctg
gttgatggagaaactgttatcaatccaactcgaaaacagatgtcttctagtgctttaaat
ttagttgttgctggagctgcacaaaatcaagttgttatgttggaagcaactgccgagaat
atattacaacaagacttctgtcatgccatcaaagtaggcgtaaagcaaacccagcaaatc
attcagggaattcaacaacttgtgaaagaacggggtgttgtcaaaagaactgttcagaag
ttattcattgctccggaagagattgtggagtgtgcaaagaaatttgcttttgacaagatc
tatgcggtgttcacagattccagccatgataaaatttctagagatgaagcaattaacaaa
ataaggcttgaaacagaagaacagctgaaagaaaaatttccagaggctgagccttatgaa
atcatggaatctttcaatgtggtttcaaaggatatttttagaaatcttgttctgaatgaa
tatagaaggtgtgacgggagagatctgacttccctcagagatattaaatgtgaagtgaat
atgtttaaaatgcttcacggatcagccttatttcagagaggtcaaacacaggttctctgt
acagttacatttgactctctagaatcaagtgtaaaatcagacgttatctcaacagcagtg
agtggaataaaggataaaaacttcatgctgcattatgagtttcctccttatgcaactaat
gagattggcaaagttactggcatgaacagaagagaacttggccacggtgctttggcagaa
agagctttgaaaccaattattccccaggatttcccattcacgataagagttacctctgaa
gtcttggagtcaaatgggtcatcttcaatggcttctgcgtgtggaggaagtttggcatta
atggatgcaggagttccagtatcgaatgcagtggcaggtgtagcaataggtctcattact
aaatgcaatctggaaaaaggagatattgaagactatcgcttgctgacagacatcctggga
attgaagattactatggtgacatggatttcaagatggcaggtactaataaaggagtaact
gccttgcaggttgatctaaaactgccaggaataccaatgaaaattgtaatggaagctatt
caacaagctacagctgcaaagagggagattttacaaattatgaaccaaacgctggcaaaa
cccagacctaacagaaaagaaagtggaccagttgtagaaactatccatgttccactatca
aaaagattaagatttgttggtcctggggcctataatttgaaaaaacttcaagcacagact
ggtgtaactgtaagtcagctggatgaagagacatactctgtgtttgcacccacacctagt
gctatgcatgaagcaagagaatttatccgtgaaatctgcaaagacgaccaggaagttaat
ttggaatttggtgctgtttatacagctacaataactgaaataagagattctggagtgatg
gtaaaattgtatccaaacatgacaccagtgttacttcataattcacaacttgatcaaaga
aagataaaacatcctagtgctctgggattagaagttggacaagaaattcaggttaaatac
tttggacgtgatccaactgatggtagaatgaggctttcacgtaaaattctacagtcaccg
gccacaactgtgcttaaaaccctaactgacaaaaacagtattgtcctaggaggtactgtt
ccacagtcatctacttcatctcagtga
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