Dryobates pubescens (Downy woodpecker): 104301653
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Entry
104301653 CDS
T08526
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104301653 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dpub04812
]
104301653 (SPTBN1)
Cytoskeleton proteins [BR:
dpub04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
104301653 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
104301653 (SPTBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SLATT_6
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
104301653
NCBI-ProteinID:
XP_009900365
UniProt:
A0A093IP95
LinkDB
All DBs
Position
Unknown
AA seq
2362 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSVVRLFSKHKAFEDEMSGRSGHFQQAIKEGEDMIAEEHFGSEKIRERIK
DIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIASYRPTIDTLHEQAKALPQEHASSPDVQGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEKWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLEKIEKEGMQLIAEKPETEAVVKEKLTGLHQMWEELESTTQTKAQRLFDAN
KAELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQ
SQARALSQEGKSTDEVDGKRLTVEKKFLELLEPLNERKANLLASKEIHQFNRDVEDEILW
VGERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITESSPNAE
AIQQRLADLQQLWNLLIEETEKRHKRLEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYA
GLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEILGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVR
QLQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVR
DLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK
HYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLS
SREIGQSVDEVEKLIKRHEAFEKSAATWDERFAALERLTTLELLEVRRQQEEEERKRQPP
TPEPSPKVAEDADSQQQWDGTKGEQVSQNGLPSDQESPRVAETAETNEMVNGAAEQRTSS
KESSPVPSPTSDRKAKMAIQAQTAATLPAKTQEIPSAQMEGFLHRKHEWETHSKKASSRS
WHNVYCVINNQEMGFYKDSKAAASGIPYHNEIPVSLKEAVCEVAVDYKKKKHVFKLRLTD
GNEYLFQAKDDEEMNTWIQAITSAISSDKIEVSPTTQSTPASSRAQTLPASVTITSESSP
GKREKDKEKDKEKRFSLFGKKK
NT seq
7089 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacagtagcaacagattatgacaatattgaaatccaacagcagtacagcgat
gtcaacaaccgctgggatgtcgatgactgggacaatgaaaacagttctgctcgactgttt
gaacgatcccgcatcaaggccctagctgatgagcgtgaggcagttcagaagaagaccttc
acaaagtgggttaattcccacttggcacgtgtgtcatgcaggattacagatctgtacact
gaccttcgtgatggaaggatgctcatcaaacttctggaagttctttcaggggagagactt
cctaaaccaactaagggaaggatgcgcatccattgcctggagaatgttgataaagctctc
cagttcctgaaagagcaaagagtgcacctggaaaacatgggatctcatgatattgtggat
gggaatcacaggctgacacttggccttatttggactattatcctaagattccagatccaa
gatatcagtgtcgaaactgaggacaataaggaaaagaaatctgctaaagatgctttgctt
ttgtggtgccagatgaagacagctggttaccccaatgtcaacattcacaacttcacaaca
agctggagggatgggatggctttcaatgcactaatacacaagcacaggcctgatctgatt
gattttgacaagctgaagaaatcaaatgcacactacaatctgcagaatgcttttaaccta
gcagagcaacaccttggtcttactaagctcctggaccccgaggatatcagtgttgatcat
cccgacgagaagtcaatcatcacctatgtggtgacatactaccactacttctccaagatg
aaagctttagctgttgaaggaaaacgcattggaaaggtgcttgacaatgccatcgaaaca
gagaagatgattgaaaaatatgaatcgctggcttctgaccttcttgagtggattgagcaa
accattatcatcctcaacaatcgcaaatttgccaactccctagttggtgtgcagcagcag
ctacaggcattcaacacttaccgcacagtagagaaaccacccaaatttacagaaaaagga
aacctggaagtgctgctttttactatccaaagcaaaatgagagccaacaatcagaaagta
tacatgccaagggagggcaaactcatctctgacattaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcgaaatgagctcatcagacaagagaaactg
gaacaacttgcacgcagatttgatcgcaaggcagctatgagagaaacttggctgagtgaa
aatcaacgtcttgtttctcaggataattttggctttgacctcccagcagtagaggctgca
acaaagaaacatgaggccattgaaacagacattgcagcatatgaagagcgagtccaggct
gtggttgcagtggcaaaggagcttgagactgaaaattaccatgatatcaaacgtataact
gcaagaaaggacaacgttattcgcctgtgggagtatctcctggagctgctcagggcacgg
agacagcggctggagatgaatcttggtctgcaaaagattttccaggaaatgctatacatt
atggactggatggatgagatgaaggtgcttctgctgtctcaagactatggcaagcatttg
ttaggagttgaggacctgttacagaaacatgctcttgtggaagctgacattgctattcag
gctgagagagtgagaggggtcaatgcatctgctcagaaatttgccaccgatggagaaggt
tacaaaccgtgtgacccacaggttatcagggaccgcgtcgctcacatggagttttgctac
caagagctgtgccagctcgcagctgagcgccgggcccgcttggaggagtcccggcgcctc
tggaaattcttctgggaaatggctgaagaagagggttggatcagggagaaggaacagatc
ctgtcatctgatgactatgggaaggacctaaccagtgttgtccgtctcttcagtaaacat
aaggcatttgaagatgaaatgagtggtcgtagtggccactttcagcaggcaataaaagaa
ggtgaagacatgattgcggaggagcattttgggtctgagaaaatcagagaaagaattaag
gatatccgggagcagtgggctaacttggaacagttatctgctattagaaagaagcgcctg
gaggaagcttctctccttcaccagttccaggctgatgctgatgacattgatgcatggatg
ttggacatcctcaaaattgtctccagtaatgatgttggccacgatgaatattccactcag
tccttggtcaaaaaacataaagatgtggcagaagagatcgcaagctaccggccaaccatt
gacacacttcatgaacaagcgaaggctctaccacaggaacacgccagctctccagatgtg
caaggcaggttgtctggaatagaggagaggtacaaggaggttgctgagctgactcggctg
cgtaaacaggccttgcaggatacccttgctctttataagatgtttagtgaggcagatgct
tgtgagctttggattgatgaaaaggagaagtggctgaataatatgcagattccagagaag
ctggaggacctggaagtgatccagcacagatttgaaagtttagaaccagaaatgaacaat
caggcatcccgtgtggcagtagtgaaccaaattgctagacagctgatgcacagtggccat
ccaagtgagaaggaaatcaaagcacaacaagataaactcaacacaagatggagtcagttc
agagagctggtagacaggaagaaggatgctctgctctccgcactgagtatccagaactac
catcttgaatgtaatgaaaccaaatcctggatcagggaaaagactaaagtgattgaatcc
acacaagatctgggcaatgatctagctggggtgatggccctgcagaggaagctgacaggc
atggaacgtgacctggtagccattgaggccaagctaagcgacctgcaaaaagaggcagaa
aagctggaatcagagcatcctgaccaggcacaagccatcctttcacggcttgcagaaatc
aatgatgtatgggaagaaatgaagaccaccctgaagaacagggaagagtcccttggagag
gcaagcaaactgcagcagttcctgagagatctggatgacttccagtcttggctatctaga
acacagactgcaattgcatctgaagatatgccaaacaccttgacagaggctgagaagctg
ctcacgcagcatgagaatattaaaaacgaaatcaacaattatgaggaagattatcagaaa
atgagagacatgggtgagatggtgacacaagggcaaaccgacgctcagtacatgttctta
cgccagcgcctacaagctttggacactggatggaatgagctgcacaaaatgtgggagaac
aggcaaaatcttctttctcagtctcatgcctaccagctctttctcagagatactaagcaa
gcagaagcatttcttaataaccaggagtatgttttggcgcacacggaaatgcccactacc
ttggaaggagcagaagctgctattaagaaacaggaagatttcatgaccacaatggatgcc
aatgaagaaaagatcaatgcagtggtagagactggcaggaggctagttagtgatgggaac
ataaactctgacaaaatccaggagaaagtggactctattgatgacagacataggaagaac
cgtgaagcagccagtgaacttctgatgagactgaaagataacagggatcttcaaaagttc
cttcaggattgtcaagagctctcactctggatcaacgagaagatgctcacagcccaagat
atgtcctatgatgaggcaaggaacctccacagcaaatggctgaagcaccaggcatttatg
gcagaacttgcatccaacaaagaatggctggagaagattgaaaaggagggaatgcagctt
attgcagagaaacctgagactgaagctgtagtgaaagaaaagctgactggtctccatcag
atgtgggaagagcttgaatccactactcagaccaaggctcagcgtctctttgatgcaaac
aaggcagagcttttcacccagagctgtgctgatttggataagtggctgaatgggttggag
agtcaaattcagtcagatgactatggaaaagatctcaccagtgtcaacatcctattgaag
aagcagcagatgctagagaaccaaatggatgttcgtaaaaaggagatagaggagctgcaa
agccaggcaagggctttaagtcaggaagggaagagtacagatgaagtagatggcaaacgc
cttactgtggaaaagaaattcttggagttgttggagcctctgaatgaaagaaaggcaaac
ctgctggcctccaaagagatccaccagttcaaccgggatgtggaagatgaaattttgtgg
gttggagagaggatgcctatagctacttctactgatcatggacacaaccttcaaaccgtg
cagctactaattaagaaaaatcagactcttcagaaagaaatccagggacatcagcctcgt
atcgatgacatttttgagaggagtcagaacattatcacagagagcagccctaatgctgaa
gcaattcagcagagacttgcagacttgcagcagctgtggaaccttctcatcgaggagaca
gagaaacgccacaagcgcctagaggagtcgcacagagcacagcagtattactttgatgct
gctgaggctgaggcctggatgagtgagcaggaactctacatgatgtcagaagagaaagcc
aaggatgaacagagtgcagtgtccatgctgaagaaacaccagattttggaacaagctgta
gaagactatgctgaaactgtgcaccagctttcaaagaccagcagaactttggtggcagat
aatcacccagaaagtgagcgtatcagcatgcgccagtccaaagtggataagctgtatgca
ggcctgaaggatctagctgaagagaggcggggcaagctggatgagagacacagactcttc
cagcttaaccgtgaggtggatgacctggagcagtggatcgctgaacgggaggtagtggca
ggatcccacgagctggggcaggattacgagcatgtcacaatgctgcaggagcgattccga
gaatttgcccgtgacactggaaacattggacaggagcgtgttgatactgttaaccacatg
gcagatgagctcatcaactctggacattcagatgctgcaacaattgcagagtggaaggac
ggactcaatgaggcctgggctgatcttctggagctcattgacacaagaacacaaatttta
gcagcctcttatgaactgcacaaattttaccatgatgccaaggagatcttagggcgtatt
caagacaaacataagaaactacctgaagagcttggtagagaccaaaacacagtggaaaca
ctacagagaatgcacacaacatttgagcatgatatccaggcacttggcacccaggtgaga
cagctgcaggaagatgctgcacgccttcaggctgcctatgctggagacaaagctgatgac
atccagaagagggaaaacgaggtcctagaagcatggaaggcactgttggatgcctgtgag
ggccgcagggttagactggtggatacaggagataaattccgtttcttcagcatggttcgt
gatctcatgctttggatggaagacgttatccggcagatagaggcccaagaaaagccaagg
gatgtttcatctgtggaactactaatgaacaatcaccagggtatcaaagcagaaatcgat
gcccggaatgacagctttactacctgcattgagctcggcaaatctcttctggcaagaaaa
cactatgcatcagaggagataaaggagaagctgctgcagctgacagaaaagagaaaagaa
atgattgacaaatgggaagaccggtgggagtggctgagactgattttggaggtgcaccag
ttttcaagagatgcaagtgtggctgaggcctggctgctgggacaggagccctacctatcc
agtcgtgaaataggtcaaagtgttgatgaagtggaaaaacttattaagcggcatgaagca
tttgaaaaatctgcagctacttgggatgagagatttgcagcactggaaagactgaccacg
ttggaactgctggaagtacgtcgacaacaggaggaagaagagaggaagagacagccgccc
actccagagcccagcccaaaagttgcagaggatgcagactcccagcagcagtgggatggg
acaaaaggagagcaggtttcccaaaatggtttgccatcagaccaggaatctccacgggtg
gcagaaactgcagaaacaaatgaaatggtcaatggagctgcagagcagaggacgagttct
aaagagtctagtccagttccttctccaacatcagaccgcaaagccaagatggccattcag
gcccagactgctgctactctaccagccaaaacacaagagattccttcagctcagatggag
ggcttcctgcatcgcaaacatgagtgggaaacacacagcaagaaagcgtcaagcagatca
tggcataacgtgtactgtgtcataaacaaccaagagatgggtttctacaaggattcaaaa
gctgctgcttctggcatcccttaccacaatgagattcctgtcagcttaaaagaagcagtc
tgtgaagtagcagtcgattataaaaagaaaaagcatgtgttcaagctaagattgactgat
ggcaatgaatacctcttccaagccaaagatgatgaggagatgaacacgtggattcaggcc
atcacatcagctatctcttctgataaaattgaagtgtccccgaccacccagagcactcca
gcctccagtcgtgcccagaccctgcctgccagcgtcacaataaccagcgagtccagcccc
ggcaagcgggagaaagacaaagagaaagacaaagagaaaagattcagcctttttggtaaa
aagaagtga
DBGET
integrated database retrieval system
