Dryobates pubescens (Downy woodpecker): 104301727
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Entry
104301727 CDS
T08526
Name
(RefSeq) uncharacterized protein C9orf84 homolog
KO
K28108
shortage in chiasmata 1
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpub03036
]
104301727
Chromosome and associated proteins [BR:
dpub03036
]
Eukaryotic type
Meiosis-specific proteins
Others
104301727
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHOC1_ATPase
SHOC1_PDDEXK
SHOC1_HhH_tandem
SHOC1_2HhH
Motif
Other DBs
NCBI-GeneID:
104301727
NCBI-ProteinID:
XP_009900452
LinkDB
All DBs
Position
Unknown
AA seq
1370 aa
AA seq
DB search
MKKFVPSGELCTSNTLIEFVSSSNPYSQTDREEISTLTKNVVQEGSTQDKYLKIDYATEF
KEQWQDLYMEDEFVFIDSLERFHKKLPTSSILLSRLHIFLVKDPLLDSRGQNLIEERECL
TFQNGMEMEENKTELQEIKEKFCTISIKDEEYFMLPFELECCKPGNSRSDSVKIPSYLEL
EELLNLAPETMADEDVCKEVIKEDLKVEITHKTEISKYFPKPQEISPSDSRSMSEFCESA
KCVPYLKDEMEVPLTPPRRQQRSWVNFLCTGLQEEPLSLSGNSILITEPSREHLEYLVWQ
SEKYRDSVNSLLLVEHKTVKLAYQHHSLTEVKKMLGVEIEAPMHSSLEEGWWLHLGFNPI
STETLEQLNTDANNTRSLLPTEVETFTRVASDQLERCLEEKNSVKNQEVLSVETHQSGKL
TDPCTSQQAQWQHFALNASTASSAKMHSADSSDEELSGGSIKKNKVEEEIYFLNQENKPP
KLSESGSCKDLSSKEDSCKVVKVAVKPASFELATKWNKDDSDLSNFIMLRSTHKLTPRKE
ESYVDCSEKVPEEKHMPCLKEDSSVCETARTEEKEQKNEDSVIIDIQASESQCQAYCLLE
EAATPVLKDLTHLGVLASVKWHFDSIKFDNTRFFLKQQEKVVCDLFKEGKTDEKEIMLFR
HAALVHLLVTVRDLLLTCSLDTALGYLSKAKDIYKTILESCLNNIWKQLKIVQCSSQKKH
ETSPKITELQCQILNWKQSYREEHSVKILIITRMDSEREKAALNHTLSTVGGFKVVDLNS
EKKGTFLGCKDIISSSYSCVIVHNHQIGADFPWTHFSLVMEYDYSENSCWKNLCKNLKVT
YMTFKTTTPETMQMGNHCSSRLLEVQIPYVFLTTEGLISMPDILQLLESKYSITFIERSS
NYSLRLFGSTNRYVVLTVDECTAIFLQSMEELNHETSCDNVISKLMVLSLQYTCCWIVFF
SRERLNSEYSLKGDILRNLVLIYATLIELTQKAEDFEVKVVLTPGTEETALIIRQIADNI
LIASNISPQEWLDKSWISVLPSESEKCLLTFPCINPLVAQLMLKKGSSLNKLFLASFDQL
QELLPEVPRKVLKHFSDITTSCSLNAAAPPETTVKDASAPDNQNHFNTFYPDHKQDHQPS
DLIDRAQNSLTGTSHVNSEVTIPPLNHHQDFFYSDIPIYLQKKSCSSEVITRRKQNPSIV
PKDCEDFAHLDVTNSACVQRQPFTLHYSSDHPSTNIARDDFFAAFSDYAPQESSKSFLEE
FRETTCTSPEIPIDQTPWNDSSPAGLCDSFASDGFLSDFFVDSAELQSLNFHQIDRKSKG
KRKQSPPFLWTKLKNKTDPGFAEIPEFKKMRLTYERVPGRSDGQTRLKFF
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttgtcccctctggagagctctgtactagcaacacattaatagaatttgtt
tcaagttcaaacccctactctcagactgacagagaagaaatttctacacttacaaagaat
gttgttcaggaaggatccactcaagacaaatatttgaagattgactatgccactgaattt
aaagaacaatggcaagatttatatatggaagatgaatttgtttttattgatagtcttgaa
aggtttcataaaaaactgcctacttcatctatacttctgagcagactacatatcttttta
gtaaaagatccccttttagattctagaggacagaatttaatagaagaaagggaatgcttg
acttttcaaaatggaatggaaatggaagagaataagactgaattgcaggagattaaagag
aagttctgtacaatatctataaaagatgaagagtatttcatgttaccttttgagttagaa
tgctgcaaacctggcaatagcagatcagattctgttaagattccatcatacttggaactg
gaagagttgttaaatttagctccagaaactatggctgatgaagatgtgtgcaaagaggtg
atcaaagaagatctcaaagtagaaatcacacataaaacagaaatttccaaatactttccc
aagccacaagagatttcccccagtgacagcagaagtatgtcagagttctgtgagtcagct
aaatgtgttccatacctgaaagatgaaatggaagtaccattaactcctccacgcagacaa
caaagatcatgggttaattttctgtgcacaggacttcaagaagaacctctttctctttct
ggtaacagtattttgattacagagccctctagagaacacctagaatatttagtatggcag
tcagagaagtatcgggatagtgtgaactctcttttgcttgtcgagcataagactgttaaa
cttgcatatcagcatcattcacttacagaggtgaagaagatgctaggagttgagatagaa
gcaccaatgcatagctcattagaggagggctggtggcttcatttgggttttaatccaatc
tccacagaaactttggaacaattaaatacagatgccaataacaccagaagtttacttcct
acagaggtagaaacattcacgcgagttgcatcagatcagttagaaagatgtcttgaggag
aagaattctgtgaaaaaccaggaggtgctttctgttgagacacatcagtcaggtaaactg
actgatccttgcacatcacagcaggcgcagtggcagcactttgccctgaacgcaagcact
gcatcatctgctaaaatgcacagtgcagattcctctgatgaagagcttagtggaggaagc
ataaaaaagaataaagtagaagaagaaatttatttcttaaaccaagaaaacaaacccccc
aaattgtctgaatcaggcagctgtaaagatctatcttctaaagaagatagctgtaaagtt
gtaaaggtagctgtaaagcctgcatcctttgaacttgctacaaaatggaacaaagatgac
tctgacctgagcaacttcatcatgttgagatccacacataaactcaccccaagaaaggag
gaaagctatgtggattgttctgaaaaagtgcctgaagaaaagcatatgccttgtctcaaa
gaggacagttctgtttgtgagactgcaagaacagaggaaaaagaacaaaagaatgaggac
agtgttataattgatattcaagcatcagaaagccagtgccaagcatactgcctcttggaa
gaagcagccactcctgttctaaaagatttgacacatctgggtgtacttgcttctgtaaag
tggcactttgacagcattaaatttgataacacaaggtttttcttaaaacagcaagagaag
gtggtgtgtgatctttttaaagaaggtaaaacagatgagaaggagatcatgctgttcaga
catgctgcgctggtgcacctgctggtgacagttcgagatcttctgttaacatgcagcttg
gacacagcacttggttatttgtccaaagcaaaggatatctacaaaaccatcttggaatcc
tgtttgaataacatctggaagcagctgaagattgtacagtgcagcagccagaaaaagcat
gaaacaagtcccaaaataacagagcttcagtgtcagatattaaattggaaacaaagttac
agagaagaacacagtgttaagatattaatcataacaaggatggactcggagagagaaaaa
gctgccctcaatcacactttatccacagtaggaggtttcaaagttgtggatttgaattct
gagaaaaaaggaacctttttaggttgcaaagatatcataagcagtagctattcctgtgtt
attgtacacaatcatcaaattggagctgacttcccttggacacacttctcattagtgatg
gaatatgattattctgaaaactcctgctggaaaaacctgtgcaaaaatctgaaagttact
tacatgacttttaaaaccaccacccctgaaacaatgcaaatgggaaatcactgtagttcc
cgtcttctggaggtacagattccatatgtatttctgacaactgaaggtcttattagtatg
ccagacattcttcagcttttggaatccaaatacagcattacctttattgaaagaagtagt
aattactccttaaggctctttggaagtacaaatcgatatgttgtgctgacagtggatgaa
tgtactgctatctttttgcagagtatggaagaactaaatcatgagacatcctgtgacaat
gtcatatcaaaactgatggtattatcactccaatacacctgctgttggattgttttcttt
tccagagaaagactgaattcagagtacagtctcaagggagatattctgcgtaaccttgtc
ttaatttatgccactctaattgaacttacacagaaggcagaagactttgaagtgaaggtg
gttcttacaccaggaactgaagagacagcactgataattcgtcagattgctgataatatt
ttgatagcatctaatatcagtcctcaggagtggttggacaaatcctggatttctgtcctg
ccatctgagtcagagaagtgcctgcttacttttccatgtatcaatccactggttgctcag
ttgatgctaaagaagggatcttcactgaacaagttgtttcttgcaagctttgatcaactt
caggaactcttgccagaggttccaaggaaagttttgaagcattttagtgacataactact
tcatgcagcttaaatgctgctgctccgccagaaacaacagtgaaagatgcgtcagctcct
gacaatcagaatcacttcaacacattctatccagatcataaacaagaccatcagccttca
gacctgattgatagggcacaaaacagccttacaggaacatcacatgtgaattcggaagtc
acaattcctccactgaatcatcatcaggactttttttactctgatattccaatctatctc
caaaagaagtcatgttcttcagaagtaattacaaggaggaagcagaatccctctattgtg
cctaaggactgtgaagattttgctcatctagatgttacaaattctgcttgtgttcaaaga
cagccctttacgttgcattatagctctgatcatccttcaacaaacattgcaagagacgac
ttctttgcagctttcagtgattatgcacctcaagagagctctaagagttttctagaagaa
tttagagagacaacatgtacgagcccagaaattccaattgaccagactccatggaacgac
tcttcacccgcaggcctgtgtgattcatttgcatctgatggttttctctctgatttcttt
gttgactcagctgagcttcaaagtctgaattttcaccaaatagatagaaaatctaaagga
aagagaaaacaaagtccaccattcttgtggacaaaattaaaaaataaaacagatccagga
tttgcagaaataccagagttcaaaaaaatgagattgacttatgaaagagttcctggaaga
agcgatggacaaacacgtcttaaattcttctga
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