Dryobates pubescens (Downy woodpecker): 104301866
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Entry
104301866 CDS
T08526
Symbol
MMP28
Name
(RefSeq) LOW QUALITY PROTEIN: matrix metalloproteinase-28
KO
K08006
matrix metalloproteinase-28 (epilysin) [EC:3.4.24.-]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dpub01002
]
104301866 (MMP28)
Peptidases and inhibitors [BR:
dpub01002
]
Metallo peptidases
Family M10
104301866 (MMP28)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
DUF4953
Reprolysin_4
Peptidase_M57
Reprolysin_5
Reprolysin_3
Peptidase_M66
Metallopep
Reprolysin_2
Peptidase_M54
Ribosomal_L4
Motif
Other DBs
NCBI-GeneID:
104301866
NCBI-ProteinID:
XP_009900610
LinkDB
All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MQFTCWSKFRATILSVDVADKKKNGLAEQIAPGVSPLCSGTSCLFLEKYGYFSELGPGTH
SPAEFTQALRAFQQVTHLPPSGVLDAPTLHQMALPRCGTGDGESQAGRAGRAASGPRRRR
TAQHALPRHELRLAVRAAFQLWSNVSALLFWEVWDGPADIRLSFFQGDHNDGLNNAFDGP
GGALAHAFFPRRGEAHFDSAERWSLRSGKGRNLFVVLAHEVGHTLGLQHSPVKSALMSPY
YKKLSKDFVLSWDDILAVQNLYGKPSKGSAIQLPGKVFTHFQDWSSGPYGADQQQRSLSA
YYCHSFFDAITADADHTLYIFKGSHFWVVPASGNASDPQPLQSRWPGXPGIDASACSPLS
GKFYFFKGGLRDWQGGPPGTAGALPHRDGFLYFFRDDQYWQFDRAKLRVLGTGKWAAQLP
WMGCWDANAGQVLF
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttacgtgttggagcaagttcagagccacgatcctgtccgtggacgtggccgat
aagaagaagaatggcttggcagagcagattgcccccggagtgtctccactttgcagcggc
acatcctgcctcttcctggagaagtatggatacttcagtgagctggggcctggcacacac
agccctgctgagttcacccaggccctgagggctttccagcaggtcacccacctgccaccc
agcggggtcctggacgcccccacgctccaccagatggctctgccacgctgtggcacaggc
gatggggagagccaggctggccgggcagggcgggcagcctccggcccgcgccgccgccgc
accgcgcagcacgccctgccgcgccatgagctgcgcctggccgtcagggctgccttccag
ctctggagcaacgtctcggccctgctcttctgggaggtgtgggacggccccgccgacatc
cgcctcagcttcttccagggggaccacaacgatggcctcaacaacgccttcgacggacca
ggaggtgccctggctcatgccttcttcccgcgccggggggaggctcacttcgacagcgcc
gagcgctggtccctgcgcagcggcaaaggacgaaacctcttcgtggtgctggcccacgag
gttggccacaccctggggctccagcactcccctgtcaagagtgccctgatgtccccctac
tacaagaagctcagcaaggactttgtcctcagctgggatgacatcttggctgtccagaac
ctgtacgggaagccttccaagggctcagccatccagctcccagggaaggtcttcactcac
ttccaggactggagctcaggtccttatggtgcagaccagcagcagaggagcctcagtgcc
tactactgccactccttctttgatgccataactgctgatgcagatcacaccctctacatc
ttcaagggcagccacttctgggtggtgccagcgagtggcaatgccagcgacccccagccc
ctgcagagccgctggcccgggnngcccggcatcgacgccagcgcctgctccccgctcagt
ggcaagttctacttcttcaaaggtggcctgcgggactggcagggggggcccccgggcacc
gcgggggccctcccccaccgcgacggcttcctctacttcttccgggacgatcagtactgg
cagttcgaccgggcgaagctgcgggtgctgggcaccggcaagtgggctgcccagctgccc
tggatgggctgctgggatgccaacgctgggcaggtcctcttctga
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