Dryobates pubescens (Downy woodpecker): 104301963
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Entry
104301963 CDS
T08526
Symbol
SIAH2
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH2
KO
K08742
E3 ubiquitin-protein ligase SIAH2 [EC:
2.3.2.27
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpub04121
]
104301963 (SIAH2)
Enzymes [BR:
dpub01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104301963 (SIAH2)
Ubiquitin system [BR:
dpub04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
104301963 (SIAH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MINDY-3_4_CD
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
zf-C3HC4_2
Arm-DNA-bind_1
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
104301963
NCBI-ProteinID:
XP_009900725
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MAQTQLEEIASRISDLNKWRDIFSFHGLEISNGAHQPGQGNTGDGTPAAGEPRGLQPPDP
PCAVPVPLLVPVEAGGQPISLDMAMGLRKLLLGNVSHVFSCEWTKAHFRFRQPCSDLAYG
LEADKGGTRAILMAVQAHIIRHLLFGRNTADTHLGRLQGVGRGEQGEALAAALAELLWAA
GGGGRATVCLVTTATHFVPCGDYRADSFTERIQLFEFWEKAPAQEFISDHINCVCPGLRT
PQVPIWLCSLCGRHGVLFSTNSLLLSCWRAERVFHLHFYNGQQEQTKPTQLTIDHELTSL
FECPVCFDYVLPPILQCQAGHLVCNQCRQKLSLCPTCRGSLTPSIRNLAMEKVASAVLFP
CKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMHAHKSITT
LQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYEGHQQFFAIVLLIGTRKQ
AENFFYRLELNGNRRRLTWAATPRSIHDGVSAAIRNSDCLVFDTAIAHLFADNGNLGINV
TISTCCP
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcacagacccagcttgaggagattgccagcagaatttcagacctgaacaagtggaga
gacatcttcagtttccatggcttggaaatcagcaacggggctcaccagccaggccagggt
aacacaggggatggaacaccagcagctggagagccaagggggctgcagccgccagaccca
ccctgtgccgtccccgtgcccctcctggtccctgtggaggcaggtggccagcccatctcg
ctggacatggcaatggggctgagaaagctgctccttgggaatgtgtcccacgtcttcagc
tgtgagtggaccaaagcacacttcaggtttcgccagccctgctcagacctggcctatggc
ttggaggcagacaaggggggaacaagagccatcctgatggctgtgcaagcacacatcatc
aggcacctcctctttggcagaaacacagcagacactcacctggggaggttgcaaggggtc
ggccgtggggagcaaggcgaggcgctggccgcagccctggcagagctgctgtgggcagca
ggaggtggtgggagagccacggtctgcctggtcaccacggccacccacttcgtgccgtgt
ggagactacagagctgacagcttcactgaaaggatccagctgtttgagttctgggagaag
gcaccagctcaggagttcatctctgaccacatcaactgtgtgtgccccgggctacggaca
ccgcaggtgcccatctggctctgcagcctctgcggcaggcacggggtcctcttcagcacc
aacagcctgctcctgtcctgctggagagcagagagggtcttccacctgcacttctacaat
gggcagcaggagcagaccaagcccacccagctgaccatagaccacgagctgacctcactg
ttcgagtgcccggtctgcttcgactatgtcctgccacccatcctgcagtgccaggccggg
cacctggtctgcaaccaatgccggcagaagctgagcctctgccccacctgccggggctcc
ctcacccccagcatcaggaacctggccatggagaaggtggcctcggctgtcctcttcccc
tgcaagtacgccaccacgggctgctccctgacactccaccacacagaaaagccagagcac
gaagacatctgcgagtaccggccctactcctgcccctgcccgggggcctcctgcaagtgg
cagggctccctggaagccgtcatgtcccacctcatgcacgcccacaaaagcatcaccacc
ctgcagggagaggacatcgtcttcctggccacggacattaacctgccgggggcggtggac
tgggtgatgatgcagtcgtgcttcggccaccacttcatgctggtgctggagaagcaggag
aagtacgagggccaccagcagttcttcgccatcgtgctgctcatcggcacccgcaagcag
gccgagaactttttctacagactggagctgaacggcaaccgccggcggctgacctgggcg
gccaccccgcgctccatccacgacggggtgtcggccgccatccgcaacagcgactgcctg
gtgttcgacacggccatcgctcacctcttcgccgacaacggcaacctgggcatcaacgtc
accatctccacctgctgcccgtga
DBGET
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