Dryobates pubescens (Downy woodpecker): 104302096
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Entry
104302096 CDS
T08526
Symbol
DDX17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpub03041
]
104302096 (DDX17)
Enzymes [BR:
dpub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104302096 (DDX17)
Spliceosome [BR:
dpub03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104302096 (DDX17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104302096
NCBI-ProteinID:
XP_009900873
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MRGFGDRGRDRDIFRFGASRGGPLPPKKFGNPGERLRKKKWDLSELPKFEKNFYVEHPEV
ARLTPYEVEELRRKKEITIRGMEGCPKPVFAFHQCSFPQYVMDALMDQNFTEPTPIQCQG
FPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQ
QVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTY
LVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLQDYVQINVGN
LELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRD
GWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSED
YVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVDHRGGGGGG
GGGRSRYRTSSSVNNPNLMYQEECDRRLRGVKEGRRDSGGFRDRERGDSYANGANKTYGS
AYGSPNSAFGAAQSQYGYTQGSYGAAAYGTSGYGTAEYSASGYGASTTAATAGRTSQFSS
SFPLWCLSCRLDLEFTI
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgagaggcttcggggaccggggccgagaccgtgacattttcaggtttggagcaagtcgt
ggaggtcctcttcctccaaagaaatttggtaatccgggggaacgtttgcgaaagaaaaag
tgggatttaagtgaactgcccaagtttgagaagaatttttatgtggaacacccggaagtg
gccaggctaactccatatgaagttgaagaattacggagaaagaaagagataacaattcga
gggatggaaggctgccccaagcctgtgtttgctttccaccagtgtagttttccgcagtat
gtgatggatgccttgatggaccagaacttcacagaacccactccaattcagtgccaaggc
tttccactggctctcagtggtcgtgatatggtgggcattgcacagactggctctggaaag
acactagcatacttgttgcctgcaattgttcacatcaaccaccagccatatttggagaga
ggagatggcccaatttgtctggtcctggcaccaactagagagttggcccagcaagtgcag
caggtggctgatgactatggcaagtgttcaagactgaagagtacctgcatttatggagga
gcacccaaaggtccccaaatcagagatctagaaagaggtgtggagatctgcattgctaca
ccaggtcgcttgattgacttccttgaagcaggcaagaccaacctccgtcggtgtacgtac
ctggtgctggatgaagcagacaggatgttggacatgggatttgaaccccaaattcgtaaa
attgttgaccagatcaggcctgacagacagactctgatgtggagtgccacctggccaaaa
gaagtgcgccagcttgctgaggacttcctgcaggactatgttcagattaatgtggggaac
ttggagctgagtgccaaccacaatatcctgcagatagtggatgtatgcatggaaagcgag
aaagaccataaactgatacaactgatggaagaaatcatggcagagaaggaaaacaagacc
atcatctttgtggagacaaagaggcgatgtgatgatctcactcgaaggatgcgcagagat
ggttggccagctatgtgtatccatggagacaagagtcagccagagagagattgggtgctt
aatgagtttcgttctggaaaggctcctatcctcattgctaccgacgttgcatcccgtggg
ctagatgtggaagatgttaagtttgtgataaactacgactatccgaacagctctgaagat
tacgtgcaccgtatcggccgtaccgcgcgtagtaccaacaaaggtactgcctacaccttc
ttcacaccaggaaacctgaaacaagccagggagcttatcaaagtgttggaagaagccaat
caagccatcaatccaaagctgatgcagcttgtggaccacagaggaggcggaggtggtggt
ggaggaggccgttctcgttaccgaacgagcagttcagtaaacaaccctaacctgatgtac
caggaagagtgtgacaggaggctccggggagtgaaagagggccggagagactcaggtggc
ttcagagaccgtgagcgtggtgacagttatgccaacggagccaacaagacctatggcagt
gcctacgggagcccaaattctgcttttggggcagcacagagccagtatggttacactcaa
gggagctatggagcagctgcctatggcacgagtggctatggcactgcagagtacagtgct
agtggctatggtgccagcaccacagctgccaccgctgggagaacctcacagttttcttcc
tctttcccattgtggtgtctctcatgcagattagacttagaattcaccatataa
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