Dryobates pubescens (Downy woodpecker): 104302132
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Entry
104302132 CDS
T08526
Symbol
ZBED1
Name
(RefSeq) zinc finger BED domain-containing protein 1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dpub03000
]
104302132 (ZBED1)
04121 Ubiquitin system [BR:
dpub04121
]
104302132 (ZBED1)
Transcription factors [BR:
dpub03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
104302132 (ZBED1)
Ubiquitin system [BR:
dpub04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
104302132 (ZBED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
hAT-like_RNase-H
PRRSV-NSP11_N
Motif
Other DBs
NCBI-GeneID:
104302132
NCBI-ProteinID:
XP_009900912
UniProt:
A0A093IQH2
LinkDB
All DBs
Position
Unknown
AA seq
695 aa
AA seq
DB search
MENKSLEGSPSDLKLVAHPRAKSKVWKYFGFDTNAEGCILQWKKIYCRICMAQIAYSGNT
SNLSYHLEKNHPDEFCEFVKSNTEQMREAFATAFSKIKPESSQQVVQDSLIMKTYQNYEN
KKHQELTSAVISLICEGMYPASIVDEPTFKALLRTAEPRYELPSRKYFCTKAIPEKYNAI
REIVLKELTEVLWCGVSTDLWRSENQNRSYVTIAVHFLSSIAANCLTVNSRCLKTFEVPE
DNTAETITRVLYETFIEWGINTKVFGATTDYSKDIVKACSLLDIPVQMPCLGHTFNAGIQ
QAFQLPKLCSLLARCRKLVEYFQQSTVAMYMLSEKQKQQNILHCMLISDRVSWWGSTLAM
LQRLKEQQFVIAAVLVEDSNNHHLMLEASEWNTIEGLVELLQPFKQVAEMMSASKYPMIS
MVKPLLHMLLNTTLNIKENDLKEISMAKEVIAKELSTTYQHAPEIDMFLNVATFLDPRYK
KLPFLSAFERQQVENRVVEEAKSLLEKVKENTFRTEEKFFTVSEEPPVKKIIISSTPPPT
SVINNMLAEIFCQTGGVEDQEEWHAQIVEELSNFKSQKVLGLNEDPLKWWSDRLALFPVL
PKVLQKYWCIMATRVFPERLFGSSANVVSAKRNRLAPAHVDEQVFLYENSRNGSEAEPED
EDEGEWGLEQEQIFNLNDSVNVNNNFFNIRDSGFV
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggagaataaaagtttagaaggttccccatcagacctaaagttagtggctcatccaaga
gcaaagagtaaagtatggaagtactttgggtttgataccaatgcagaaggatgcatattg
caatggaagaagatctactgccgtatttgcatggcacagattgcctattcaggaaacacg
tccaacctctcctaccaccttgagaaaaatcaccctgatgaattctgtgaatttgtgaaa
agtaacactgagcaaatgagggaagccttcgccactgcgttctcaaaaatcaagccagag
tcctcgcagcaggttgttcaggatagcctcatcatgaagacgtaccagaactatgaaaac
aaaaagcatcaggagctgacatctgcagtcatcagcttgatttgtgagggcatgtatcca
gcctctattgttgatgaacccacattcaaggccctcttgagaacagcagagcccaggtat
gaacttccaagccggaagtacttctgtacaaaagctattcctgaaaagtacaatgccatt
agagaaattgtgctgaaagagcttactgaggttctgtggtgtggcgtatccacagacttg
tggaggagtgaaaaccagaacaggtcatacgtaaccatcgcagttcactttctcagcagc
atcgctgccaactgcctgactgtgaactcacggtgtttaaaaacatttgaagtaccggag
gataatactgcagaaactattacacgagtcctttatgaaactttcattgagtgggggatc
aatacaaaagtctttggtgctacaacagattacagtaaagacattgtgaaagcttgctct
ctcctagatattcccgtacagatgccttgtttggggcacacttttaatgcaggaatacaa
caagcttttcagctccccaaactctgcagcctccttgccaggtgccgaaagctggtggag
tatttccagcaatctactgttgcaatgtacatgctgagtgagaagcagaagcagcagaac
atcctccactgcatgctgataagtgaccgtgtttcctggtggggaagtacactcgctatg
ctgcagcgcctcaaggagcaacagtttgtcattgcagctgttctcgttgaggacagcaac
aaccatcacctcatgctggaagccagtgagtggaatacaatcgaggggctggtggagctg
ctgcagcctttcaagcaggttgcagagatgatgtctgcttcaaagtacccaatgataagt
atggtgaagccacttctccacatgcttctgaatactaccctgaacatcaaagagaatgat
ttgaaagaaatcagcatggcaaaggaggtgattgctaaagagttgtcaaccacctaccag
cacgcacctgagatagacatgtttctcaatgttgcaactttcttggatcctcgctacaaa
aaactgccttttctttcagcctttgagcggcaacaggttgaaaacagagtggtggaagaa
gcaaaaagcctgctggagaaagtaaaagaaaatacttttaggactgaagagaaattcttc
actgtttcagaagagccgcctgtgaaaaaaatcatcatctcctctactcctcctcctacc
agtgtcatcaacaacatgctcgcagagatcttttgccagacaggaggtgtggaggaccag
gaggaatggcacgctcaaatcgttgaggagttgagcaacttcaagtctcaaaaggtcctt
ggtttaaatgaagatcctctgaaatggtggtctgacagactagcactgtttccagtttta
ccaaaggttcttcaaaaatactggtgtattatggccacaagggtcttccctgaacgcctt
tttggttcttctgctaatgttgtaagtgcaaagagaaaccgattagccccagctcatgtg
gatgaacaggtctttttgtacgaaaacagtcggaatgggtccgaggcagaaccagaggac
gaagatgaaggagagtggggtttggaacaggaacagatttttaatttaaatgactcagta
aatgtaaacaacaatttctttaatatccgagacagtgggtttgtttaa
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integrated database retrieval system
