Dryobates pubescens (Downy woodpecker): 104302356
Help
Entry
104302356 CDS
T08526
Symbol
ZFR
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger RNA-binding protein
KO
K13203
zinc finger RNA-binding protein
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpub03041
]
104302356 (ZFR)
Spliceosome [BR:
dpub03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
104302356 (ZFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
104302356
NCBI-ProteinID:
XP_009901161
LinkDB
All DBs
Position
Unknown
AA seq
1049 aa
AA seq
DB search
MATGNYFGFTHSGAAAQYSQQPASGVAYSHPTTVASYTVHQAPVAAHTVTAAYAPAAATV
AVARPAPVAVAAAATAAAYGGYPTAHTATDYGYTQRQQEAPPPPPPVTTQNYQDSYSYVR
STAPAVAYDSKQYYQQPTATAAAVAGASXPQPSVAESYYQTAPKAGYSQGATQYTQAQQT
RQVTAIKPATPSPATTTFSIYPVSSTVQPVAAAATVVPSYTQSATYSTTAVTYSGTSYSG
YEAAVYSAASSYYQQQQQQQKQAAAAAAAAAATAAWTGTTFTKKAPFQNKQLKPKQPPKP
PQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKASQNTSNSSTSARGTQNQLRCELC
DVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPNVVTQATSSTSTSASKPTASAS
NIATSSSTVNSSVASSAVKILTPTVNTPLNTASNSKTSSSAANIAVKKISTPKINFVGKY
RSGNKLQTTGSKLEEMKSAESVKTTPAATVPTQEVKSDTAAESVAPTTLAALQSDVQPVG
HDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLKGRRHRLQYKKKVNPDLQVEVKPS
IRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRRYEEDMYWRRMEEEQHHWDDRRRMP
DGGYPHGPPGPLGLLGVRPGMXPQPQGPAPLRRPDSSDDRYVMTKHAAIYPTEEELQAVQ
KIVSITERALKLVSDNMTDHDKSKNKEGDDKKDGSKDRALKGVLRVGVLAKGLLLRGDRN
VNLVLLCAEKPSKSLLSRIAESLPKQLAVISPEKYDIKCAVPEAAIILNSCVEPKMQVTI
TLTSPVIREENMRDGDVTSGMVKDPPDVLDRQKCLDALAALRHAKWFQARANGLQSCVII
IRILRDLCQRVPTWSDFPSWAMELLVEKAISSATGPQSPGDALRRVFECISSGIILKGGP
GLLDPCEKDPFDTLAVMTDQQREDITSSAQFALRLLAFRQIHKVLGMDPLPQMNQRFNIH
NNRKRRRDSDGVDGFEAEGKKDKKDYDNF
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggccaccggcaactactttggattcacccatagcggggctgctgcccagtatagccag
cagccagcatcgggtgtagcttattcccatccaactacagttgctagctacactgtccat
caagcaccagttgctgcgcacacagttaccgcagcctatgctccagcagcagctacagtc
gcagtagccagacctgctccagtagctgttgcagctgctgcaacagctgctgcttatgga
ggctatcctacagcacacacagctacagattatggttatacacagaggcagcaagaagct
ccaccaccaccacctcctgtcactacacagaattaccaggattcctattcttatgttcga
tctactgccccagctgtagcttatgacagtaaacaatactatcaacaaccaacagcaacc
gcagcagctgtggctggcgcttccnnccctcagccttcagtagctgaatcatactaccag
acagctccaaaagcagggtatagccaaggcgcaactcagtatacccaagcccagcaaacg
cgacaagtgacagcaataaaacctgcgacccctagtccagcaacaacaacattttctata
tatccagtatcctctactgtgcagccagtagcggctgcagctactgttgttccatcctat
actcaaagcgcaacttacagcacaacagcagttacttactctggtacttcttactctggc
tatgaagctgccgtgtattcagctgcatcatcctattaccagcagcagcagcagcaacag
aaacaagcagcagcagcagcagctgctgctgctgcaacagctgcttggacagggaccacg
tttactaaaaaggcaccattccaaaataagcaactgaaaccaaaacaacctcccaaacca
ccccagatccactactgtgatgtttgtaagatcagctgtgctggaccacagacttataaa
gaacacttagaaggccagaagcacaaaaagaaagaagcagcattaaaagcttcccagaac
accagtaacagcagcacttcagctcgtggaactcagaatcagttacgctgtgagctttgt
gatgtgtcttgtacaggggcagatgcttatgctgcccatatccgtggcgccaagcatcag
aaagtagtcaagttgcacacaaaacttggcaaacccattccttcaactgaaccaaatgtg
gttacccaagcaacttcctcaacatccacatctgcttctaaaccaactgcctctgcttca
aatatagcaacaagcagcagtactgtgaactcctctgttgcatcctctgcggtgaaaatt
cttactcccacagtaaacacaccacttaacactgcgtccaacagcaaaacatcttcttct
gctgctaatatagctgttaagaaaatatctacaccgaaaataaactttgttggcaagtac
agaagtggcaataaacttcagacaacaggaagtaaactggaagaaatgaaatcagctgaa
agtgttaaaacaactcctgctgctacagtaccaacacaggaagtaaaatcagacacagca
gctgaatctgtggctcccacaactcttgctgccttgcaaagtgatgtccagccagttggc
catgactatgtggaggaggtaagaaatgatgaaggaaaggtgatccgctttcactgtaaa
ctctgtgaatgcagttttaatgatcctaatgccaaggagatgcacttaaaagggaggcgg
cacaggcttcagtacaagaaaaaagtaaacccagacttacaagtagaagtaaagcccagt
attcgagcaagaaaaattcaagaagagaagatgaggaaacagatgcagaaagaagaatac
tggagaagacgagaagaggaagaacgctggagaatggaaatgaggagatatgaagaggac
atgtactggaggaggatggaggaagagcagcatcattgggatgaccgtcgcagaatgcca
gatggaggatatcctcatggtcctccaggacctctaggcttgctgggagttagaccagga
atgnctcctcagccccaaggaccagctcctctacgccgccctgactcttcggatgaccgc
tatgtcatgaccaaacatgctgccatatatccaacggaggaggaacttcaagcagtccaa
aaaatcgtttctattacggagcgtgctttgaaacttgtttctgacaacatgactgatcat
gataaaagcaagaacaaagagggagatgacaaaaaggatggcagtaaagacagagcattg
aaaggagtcttgcgggtaggtgttttggctaaaggtctgctgcttcgtggagaccgaaac
gtcaatcttgttttgttatgtgctgagaagccttcaaaatcgttacttagccgtattgct
gaaagtcttcccaaacaacttgcagtgataagtcccgagaaatatgatatcaagtgtgca
gtcccagaagcagcaataattttaaattcatgtgtggaacccaaaatgcaagttactatc
acactgacatctccagtcattcgagaggagaacatgagggatggagatgtaacctcgggt
atggtgaaagacccaccggacgtcttggacaggcaaaaatgccttgacgctctggctgct
ctacgccacgctaagtggttccaggctagagctaatggtctgcagtcctgtgtgattatc
atacgtattcttcgagacctgtgtcagcgagttccaacttggtctgattttccaagctgg
gctatggagttgcttgtggagaaagcaattagcagtgctactggaccacagagtcctggg
gatgcactgagaagagtttttgagtgtatatcttcaggaatcatccttaaaggtggtcct
ggccttctggacccttgtgaaaaagatccttttgatacacttgctgtaatgacagatcag
caacgagaggatattacttcaagtgcacagtttgcactgagactccttgcattccgtcaa
atacacaaagtcttgggaatggatccattaccacagatgaatcaacgcttcaacatccat
aataatcgtaaaaggagaagggacagtgatggggtagatggatttgaagcagaggggaag
aaagacaaaaaagattatgataacttttaa
DBGET
integrated database retrieval system
