KEGG   Dryobates pubescens (Downy woodpecker): 104302387
Entry
104302387         CDS       T08526                                 
Symbol
KDM4C
Name
(RefSeq) lysine-specific demethylase 4C
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
dpub  Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:dpub00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dpub03036]
    104302387 (KDM4C)
Enzymes [BR:dpub01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     104302387 (KDM4C)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     104302387 (KDM4C)
Chromosome and associated proteins [BR:dpub03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    104302387 (KDM4C)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD DUF7141 Tudor_5 SLX1_C LBR_tudor Rad9_Rad53_bind
Other DBs
NCBI-GeneID: 104302387
NCBI-ProteinID: XP_009901191
LinkDB
Position
Unknown
AA seq 1066 aa
MATVVSDSPPNPTCKIMTFRPSMDEFRDFNKYVVYMESQGAHRAGVAKVIPPKEWKPRKH
YDDIEDLVIPAPVQQMVTGQAGLFVQYNVKKNPMTVKEFKELANSPKYCTPRHRNYEDLE
RKYWRSLTFVAPIYGADINGSIYDEDIKEWNIAHLNTILDAVEERGISIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGQRLERLAQGFFPSISEGCNAFLR
HKITLISPTVLKNYGIPFDKVTQEAGEFVITFPYGYHAGFNHGFNCAESTNFATVRWIDY
GKAAKLCTCRKDMVKIPMDIFVKKFQPHRYHLWKKGKDLYTIDHTKPTPESTCEVKLWLQ
KRKKMKITFKRFHDTGSQSKKFKTSEDMKISAVVASAKITATERATDDFKVSEEPGKEEM
LVNTGVPSGEEENSSRMQLGQHLLDNVKAAGGIHSESFSSPLPVLPKKEDEDKTSSSHAG
FTFEDSGANMPASSCYRKEESLKHCLRSASSMAYCKPEQQACETGNPDKEDYVSLEAGVS
DLEKCESRLEHGVVPVVKKDEDNGVETSSSSEDERKKISKSWRHPLNKPSARSQMILVKQ
QATGDEELAEITSIEKNVQETETWARPLVYLWQTKAPSFNAEKDYNAACAKKEPYCAICT
LFMPYKTDNYDEESCVLRETDSAETLEAKNEKSKPLIPEMCFSYREKNTENYPSNAFIEE
DGTSRLISCTKCCVRVHASCYGVPSHEIRKGWLCSRCKKEAWTADCCLCNLRGGALKQTT
DKRWAHVICAIAIPEVKFGNVRERAPIDISKIPLQRLTLKCIFCRQRIKKISGACTQCSY
RHCPASFHVTCAHAAGVPMEPHDWPYVVYITCFRHKSNQNVRAKVCEKALTVGQTVITKH
RNTRYYSCRVIAVTSQLFYEVLFDDGSFSLDTFPEDIISRDCLQLGPPAEGEVVQVKWPD
GKLYGAKYLGTNTTNMYQVEFEDGSQIVMKREEIYTLDEELPKRVKARFSTASDMRFEDA
FCGTDTILGEKRQRVLSSRFRNEYVNDPGYRAFLKSSFHKKCQKEL
NT seq 3201 nt   +upstreamnt  +downstreamnt
atggctactgtcgtctcagatagtcctccaaacccaacctgcaaaatcatgacttttagg
ccttcaatggatgaattcagggacttcaacaaatacgtagtgtacatggaatcacaagga
gctcacagggctggagttgcaaaggttatcccaccaaaggagtggaagccaagaaaacat
tatgatgatattgaagatttggtgattcctgctccagttcagcagatggtcactggccag
gcggggctcttcgtacagtacaatgttaaaaaaaacccaatgacagtgaaggaattcaag
gagctggccaacagtcccaaatactgcacaccaagacacagaaactatgaagatctggag
cgtaaatactggaggagcttgacttttgtggcaccgatttatggagcagatatcaatggg
agcatttatgatgaagatattaaggaatggaatattgctcatcttaatacaatattggat
gctgtagaagaacgtgggatttctatcgagggcgtaaatacgccgtatctgtattttggc
atgtggaaaacaacatttgcatggcacactgaagacatggatctctacagtattaattat
ctccacttcggggagccgaagtcatggtatgctattcctccagagcatgggcaacgactt
gaaagactagctcaagggttcttcccaagcatctctgaaggatgcaatgcttttcttcgc
cacaaaattactctaatttctccaacagtattgaaaaactatggaattccttttgacaag
gttacacaggaggcaggggaatttgtgatcacttttccatatggatatcatgcaggattt
aaccatggttttaactgtgcagagtcaacaaactttgccaccgtccgatggattgattat
ggaaaggcagcgaagctgtgcacttgtaggaaagacatggtgaaaatacccatggacatc
tttgtgaagaagtttcagccacacagataccatctatggaaaaagggcaaggatttatac
accattgatcacacaaaaccaactcctgaatcaacatgcgaagtaaagttgtggctgcag
aaaagaaagaaaatgaagatcactttcaagcgcttccacgacaccggatctcaatctaaa
aagtttaaaacttcagaggacatgaaaatatctgctgtggtagctagtgcaaaaatcaca
gcaactgaaagagctactgatgacttcaaggtcagtgaagaacctggaaaagaagagatg
ctggtaaacacaggagtgccttctggggaagaagaaaacagtagcagaatgcagctgggt
caacatttattggataatgtcaaggctgcaggaggcatccattcagaatctttttcaagc
cctcttcctgtgcttccaaaaaaggaagatgaagacaagacatcttccagtcatgctggt
tttacatttgaagattctggggccaacatgcctgcctctagttgctatagaaaagaagaa
agtttgaaacattgccttcggtctgcttcatccatggcatactgtaagccagagcaacaa
gcttgtgaaacaggaaatccagataaagaggattatgtctcattggaggctggtgtcagt
gacctagaaaaatgtgaaagtagattggagcatggagtagtgcccgttgtaaaaaaggat
gaagacaatggcgtggaaacatccagttcctcagaagatgaaagaaagaaaatttctaaa
agctggcgtcatccactgaataaaccctcagccagatctcaaatgattttggttaaacag
caagcaacaggtgatgaagaactggctgagattacctcaattgaaaagaatgttcaagag
acagagacatgggccaggcctctggtttacctttggcagactaaagcacccagtttcaat
gctgaaaaagactacaatgcagcctgtgcaaaaaaggaaccatactgtgccatctgcaca
ctcttcatgccatataagacagacaattatgatgaagaaagttgtgttctcagagaaaca
gactcagcagaaacattggaggctaaaaatgaaaagtctaaacctcttattcctgagatg
tgttttagttatcgtgaaaaaaacactgaaaactatccatcaaatgcctttattgaagaa
gatggaacaagtcgcctcatttcctgtacaaagtgttgtgtacgggttcatgcaagttgc
tatggtgttccttctcatgaaatccgtaagggatggttgtgttctcgatgcaaaaaagaa
gcctggacagctgactgttgcctctgcaatttgagagggggtgcattaaagcaaactact
gacaagaggtgggcacatgtaatatgtgcaattgccatcccagaagtcaaatttggtaat
gtcagagaacgtgcaccgatagacattagcaaaatacctttgcaaagattaacattgaaa
tgtatcttctgcagacagagaattaagaaaatttctggtgcctgcacacagtgttcatac
agacactgcccagcctctttccatgtcacctgtgcccatgctgcaggagtgcctatggaa
cctcatgactggccatacgttgtctacatcacatgcttcaggcacaagagcaaccaaaat
gtgagagccaaggtgtgtgagaaggcccttacggttgggcagacagtcatcacaaaacat
aggaatacacgatactacagctgcagagtcatagcggtgacatctcaacttttctatgaa
gtcctgtttgatgatggatctttcagcctggatacttttcctgaagacatcataagcaga
gattgcctacagctgggtccacctgcagagggagaagttgtccaagtgaaatggcctgat
ggaaaactgtatggtgcaaagtatctgggaacaaatacaaccaacatgtatcaggttgag
tttgaagatggttctcaaattgtaatgaagagagaagagatctacacactagatgaagag
cttcctaagagagtaaaagcacgtttttctacagcctctgacatgagatttgaagatgca
ttttgtggaacagatacaatcttgggagagaagaggcagagagtattgagttcacgattt
aggaatgaatatgtgaatgatccaggataccgtgccttcttaaagagctcattccacaag
aagtgccagaaagagctgtga

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