Dryobates pubescens (Downy woodpecker): 104302453
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Entry
104302453 CDS
T08526
Symbol
RAD54B
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104302453 (RAD54B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpub03400
]
104302453 (RAD54B)
DNA repair and recombination proteins [BR:
dpub03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
104302453 (RAD54B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
104302453
NCBI-ProteinID:
XP_009901265
LinkDB
All DBs
Position
Unknown
AA seq
918 aa
AA seq
DB search
MRRSAAPSQVVGNAAKKPRFVPPGKAATVHLKNESKEMDQGIKLKETDETEGSASLLSNL
CDQKHSANFTQSVESTEKVRTTKPCFSINKNSKVEMKTLHTPKADVLCLPTSGAAKEEAA
QQEPGCPVKYFSVVWCKASKKKHKKWEGDAVLIAKGKSVILKDMEGKDIGRGSGYKSKEL
ESLEEGQTLMVGGKEIEVMGVISADDFSSGRCFQAGIGTHDTVPAALSQANLKSFCKPFK
AVCQASTKENILKGPQSCKPRHDPSASNSLVMPKPSASHQWMFNKAGLPVVDVVVDPYIA
NNLRPHQREGILFLYECVMGMRVSGRFGAILADEMGLGKTLQCIALVWTLLRQGPYGCRP
VLKRALIVTPGSLVKNWRKEFQKWLGSERIKVFTVDQDHKVEEFLSSPLYSVLIISYEML
LRCLDQVQAVEFSLLICDEGHRLKNSSIKTTTALTALSCERRILLTGTPIQNDLQEFYAL
IEFVNPGILGSLSTYRKVYEEPIVKSREPSATEEEKELGEKRAAELTRLTGLFILRRTQE
VINQFLPPKKESIIFCLPTALQLQLYRKLLSSRVIRSCLQGRLENSPHLVCIGALKKLCN
HPCLLFKALKEKSCDPVSGEQDESSLYEGVIDVFPQDYTAETFSESDSGKLQVLLRLLAA
IQELSPSERVVLVSNYTQTLNILQETCRRYGYSYTRLDGHTPVSQRQQIVDAFNSKFSPA
FIFLLSSKAGGVGLNLVGASHLVLYDIDWNPATDIQAMARVWRDGQKHTVHIYRLLTTGS
IEEKIYQRQISKQDLSGAVVDLSKTSEHIHFSVEELRNLFTLHEDSSCVTHDLLECDCMG
RSEFQNSSSEEPSVSRSCQLGQNQTKANSKKALSMSQLMQWKHFSGHHQALDDPFLERIK
GNVSFIFQNVTNSPSLSC
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgagaagatcagcagctccaagtcaagtggtaggaaatgcagccaaaaagcctaggttt
gttccaccaggaaaagctgccacagttcatctcaagaatgaatctaaggagatggaccaa
ggaatcaaactcaaagagacagatgagacagagggaagtgcttcattgctttctaacctg
tgtgaccagaaacacagtgcaaattttacacagtctgtggagtcaactgaaaaagtcagg
actacaaaaccatgtttcagcattaacaagaacagcaaggtggaaatgaagacactacat
acacccaaagctgatgtgctgtgcttgcccacatcaggggcagcaaaggaagaagcagcc
cagcaggaacctggctgccctgtgaaatatttcagtgttgtgtggtgtaaggcatcaaag
aagaagcacaagaagtgggaaggtgatgctgttctcattgcaaaaggaaagtcagtaatc
ctgaaagacatggaaggcaaagacattggaagaggttcaggctataaatctaaggagctg
gagagtctcgaagaaggccaaacactgatggttggaggaaaagaaatcgaagtgatgggt
gtgatttcagcagatgacttcagcagtggcagatgtttccaagctggaatagggactcat
gacacagtcccagctgctctctctcaagccaatctgaaatcattctgtaaaccattcaaa
gctgtctgtcaagccagcactaaagagaatatcctcaaaggtcctcaaagctgcaaacct
cgccacgatcccagcgcttcaaattccctggtgatgcccaaaccaagtgccagccatcag
tggatgttcaacaaggctgggctgcctgtggtggatgtggttgtggatccttacatcgca
aataacctccgacctcaccagagggaaggaattctctttctctatgaatgtgtgatggga
atgagagtgagtggcagatttggagccattcttgctgatgaaatgggcttaggcaaaacc
ttgcagtgcattgctctggtctggaccctgctgcgccaggggccctacggctgcagacct
gtgctcaagagagctctaattgtcacccctgggagcctggtgaagaactggagaaaggaa
tttcagaagtggttgggaagtgaaaggatcaaagtcttcacagttgatcaggaccataaa
gtagaagaattcctcagctccccactctattctgttctgatcatcagctatgagatgctg
ctgagatgcttggaccaggtgcaggctgtggagttcagcctcctcatctgtgatgaaggc
catcgcctgaaaaacagctccattaagaccaccacagccctcactgctctgtcctgtgag
aggagaattctcctcactggtactccaatccaaaatgacctgcaagaattttatgcatta
atagaatttgtgaatccaggaatacttggttctctatccacctacagaaaggtatatgag
gagccaattgtcaagtccagagaaccttcagcaacagaggaggagaaggaactaggagaa
aaaagagcagcagagctcacacgcctcactggactctttattctgaggagaacacaggag
gttatcaaccagttcctgccccccaaaaaggagagcatcatcttctgcctacctacagca
ctgcagctgcagttgtatcgaaaactgcttagctccagagtgatcaggtcctgcctgcaa
ggcaggctggaaaacagccctcacctggtctgtataggagctctgaaaaagctctgcaat
catccatgtcttctgtttaaagctctgaaggaaaaaagctgtgatcctgtgtctggtgaa
caggatgagtccagcctctatgaaggtgtgatagatgtctttccacaagactacactgca
gagactttctctgaaagtgattcaggaaaactgcaggtgctgctgaggctgctagcagca
atccaagagctgagcccttctgagagggttgtcctggtgtccaattacactcagacatta
aacatattacaggagacatgccgacgttatggatactcttacaccaggcttgatggccac
actcctgtctcccagagacaacagattgttgatgctttcaatagcaaattcagtccagct
tttatctttctgctgagctcaaaggctggtggagtagggctgaatctggttggagcttct
catttggtcctgtatgatatcgactggaatccagcgacagacattcaggcaatggctaga
gtgtggagagatggccagaaacatactgtgcacatctacaggctgctgaccacaggctca
atagaagaaaagatttatcaaagacagataagcaaacaagacctttctggggcagttgtg
gacctctccaagacatctgaacacatccatttttctgtggaggagcttaggaacctcttt
actcttcatgaagactccagctgtgttacccatgacttgcttgagtgtgactgcatggga
aggagtgagtttcaaaattcttcctcagaagagccttctgtatctagaagctgccagctt
ggccaaaaccaaacgaaggctaactcaaagaaagctctctccatgtcacagctgatgcaa
tggaaacacttctctgggcaccatcaggctcttgatgaccctttccttgaaaggataaaa
ggcaatgtttctttcattttccagaatgtaaccaattcaccttctctctcctgttaa
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