Dryobates pubescens (Downy woodpecker): 104302485
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Entry
104302485 CDS
T08526
Name
(RefSeq) LOW QUALITY PROTEIN: dynein heavy chain 9, axonemal-like
KO
K10408
dynein axonemal heavy chain
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
104302485
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
dpub03037
]
104302485
04812 Cytoskeleton proteins [BR:
dpub04812
]
104302485
Cilium and associated proteins [BR:
dpub03037
]
Motile cilia and associated proteins
Dynein arm
104302485
Cytoskeleton proteins [BR:
dpub04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
104302485
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_6
DHC_N2
MT
AAA_8
AAA_9
AAA_lid_1
AAA_lid_11
AAA_7
Dynein_heavy
DHC_N1
Dynein_AAA_lid
AAA_5
DYN_lid
AAA_22
AAA_16
AAA
AAA_30
Sigma54_activat
nSTAND6
DYH2-5-8_CC
Motif
Other DBs
NCBI-GeneID:
104302485
NCBI-ProteinID:
XP_009901299
LinkDB
All DBs
Position
Unknown
AA seq
3069 aa
AA seq
DB search
YQEKLFMNWSQTVSERSQYNLTQPLLRRDPDTKLLAVNFDPQLVSVLREVRYLSGSQLGT
IPPAAADIYCCKESYWELVAKLELMVSSYNKVLRTVLEVEYPLIQGQLQDIDLKLKEAEE
SLNWKMEGVWDHISRVVDAIQDLEQRTQRARDNVEEIQTTVQSWVAPILERKDSKKESLL
SLEDCQGQLERHYSLVRESGQRIHSLLKENQSLLLADPASDIWKAYVEYLDEIVLDGFYS
ATECSLKYLLDNTDPEAGLAPLFEVQLDLVEPELVFHPSLDPGASDGFYEMMESLLAGIY
RSSSLVPRLAQHSGCPHYQRSLLSAVRRRSLVFKQHLVDHVTHSLADLEEFIKTADKGLS
KKVEKGDSDGLVEVMGHLLAVKERQNVTDAMFEPLKQTIELLMSYEQPLPEEVYRQLEFM
RFDTQKPYELLDAKQVEIKAMEAAMGSIQEAAGLFEVMVPDYKQLRQCRKELCLLKELWD
MISLVNTTLEAWQTTKWAAIDVESMDLECRRFARELRSLDKEVRGWDAFSGLDGRVRNTL
RALRAVAELQSPAIRDRHWGQLVQLTGVSFVMDSTTTLADLLRLNLHDFEDEVRGIVDRA
AREMGMEKVLGELQLTWGSMEFRYEPHPRSGVPLLKPDVELLETLEDNQVQLQGLLSSKG
IAFFLEEVAGWQRKLAAADCAIGLWFQVQRAWAHLESIFLGSEDIQTQLPQDSKRFEGID
VDFRELAWEAQRTPNVLEAPSLPSCPRLCSPALSPRLLLCEKALAEYLDMKKLAFPRFYF
ISSADLLDILSNGTNPQLVQRHLPKLFDSLARLEFQLDSEQKPTKVGLGMHSGEEEYVSF
SQPCDCSGQVEVWLNHVLDSMRATVRAQMAEAVMAYEEKPREQWLFDYPAQVALTCSQIW
WTTEVGIAFSRVEEGYENAMKEYHKKQVAQLNSLVTMLLGQLSKGDRQKIMTLCTIDVHA
RDVVAKMIAQKVDSAQAFLWLPQLLHRWAEEEGHCYANICDAQFLYSYEYLGNTPRLVIT
PLTDRCYITLTQSLHLTMSGAPAGPAGTGKTETTKDLGRALGIMVYVFNCSEQMDYKSCG
NIYKGLAQTGAWGCFDEFNRISVEVLSVVAVQVKSVQDALREKKKSFTFLGEEIRLVPSV
GIFITMNPGYAGRTELPENLKALFRPCAMVVPDLELICEIMLVAEGFLEARALARKFVAL
YRLCKELLSKQDHYDWGLRAIKSVLVVAGALRRAEPGRPEEQVLLRSLRDANLPKVGGDD
LPVVQLEELLSVRHSVFVVGSAGTGKSQVLRALHRTYQIMSRRPVWADLNPKAVTNDELF
GIINPSTGEWKDGLFSSIMRELANITHDGPKWMVLDGDIDPMWIESLNTVMDDNKVLTLA
SNERIPLPPSMRLLFEISHLRTATPATVSRAGILYINPSDLGWSPPVSSWIDRREIQAER
ANLTILFDKYLPACLDTLRTRFKKVTPIPEQSVIQMLCYLLECLLTEQSTPPDCPKELYE
LYFVFAAVWAFGGSLFQDQVXXYRVEFSKWWVAEFKTIKFPSQGTVFDYYIDPETKKFEP
WSKLVPHFEFDPEMPLQVSDPCRPLVWVXXXARWRLGGSAGTGKTLLLQHSLSLLPPQAY
LLQKVPLNYYTTSAMLQGVLEKPLEKKAGRSYGPAGSKQLVYFIDDLNMPQVDAYGTVQP
HTLLRQHLDYGHWXEATWAGLDWTFLTMAPSQPCWNHTASSVSFLSLPQRHFCTFAVSMP
GQEALARIYSTILMQHLSSGSFSGAVQKSAQQLVALALALHQKVAAAFLPTAIKFHYVFN
LRDLSNIFQGLLFSSPECVQQPQDLVKLYLHESSRVYRDRMVEEKDSAAFDRIQLEMVKR
FYDDMEDTLEQAKRLNIYCHFAKGVGEPSYRPVPSWEELHQILVEALDNYNEVNAAMNLV
LFEDAMCHVCRISRILQGPRGNALLLGVGGSGKQSLARLAAFISALQVFQIALRKGYGIP
DLRADLASLYLQAGVKNVGTVLLLSEAQVAEEQFLVLVNDFLATGEIPDLFPEEEVENII
SSLRSEVRARGLLDSRDTCWRFFIERVQRQLKASLQGSISQFLAHVHSSVSQASQLYRSR
QRRYNYTTPKSFLEQIKLYHSLLSRKGKDLKAKMERLQNGLEKLNSTSAQVEELKAKLAV
QEVELKQKNDDADKLIQVVGVETEKVSKEKAVADEEEQKVALITQEVEQKQKDCEEDLAK
AEPALVAAQEALNTLNKRLSENLRKLTARFEKATADKLKCEQEAEATACTIALANRLVGG
LASEKVRWAEAVKDLQQQQSSLCGDLLLVSAFVSYLGYFSWKYRQDLLEGSWKPYLQQLQ
RKGRSSDWEGPSSREATVGQRWPLLVDPQLQGSSWIKARHGEELRLIRMGQEGYLERLEA
ALAAGDVVLLENLEESVDPVLGPLLGRETIKKGRCLRLGDRECDFNPSFRLILHTKLPNP
HFPPELQAQCTLIDFSVSREQGCSEPQATAALCHVWVLPWPGIQGRLKQSELTKQQNSFK
ITLKSLEDNLLSRLSSASGNFLGDTALVENLETTKQTAAEIEEKVQESKVTEAKINEARE
HYRPAAARASLLYFIMKDLHTIHPMYQFSLKMAIGHWPFLSWLSAAESLSGRLERLLDSI
TFSAFQYTTRGLFECDKLTYTAQLTFQILLMSQEISPVELDFLLGSPAEPGATSPVEFLS
DHSWGGIKALSAMEQFRSLDRDIEGSARRWRKFVESECPEKEKFPQEWKNKTALQQLCIL
RALRPDRMTYALRDFVEQKLGSKYVVGRPLDFAATFEESGPATPLFFILSPGADPLKDVE
KQGRKLGYTFNNRNLHNVSLGQGQEVVAERALELAAKEGHWVILQNIHLVAKWLSSLEKQ
LERHSEGSHPGLRVFLSAQPSPCPLSHCIPQAILQSSIKITSEAPSGMQANLHQALDNFS
QDTLELCSREKEFRSILFALCYFHAVVAERRRFGPQGWNRPYPFSTGDLTISVNVLHNYL
EASPKVPYADLRYLFGEIMYGGHITDEWDRRLCRTYLEEFIKPEMMEGELLLAPGFPLPG
TMDYNGYHQ
NT seq
9208 nt
NT seq
+upstream
nt +downstream
nt
gtatcaggaaaagctcttcatgaactggtcccagacagtctctgagaggtctcagtacaa
cctcactcagcctctcctccgcagggacccagacaccaaactgctggcagtgaattttga
cccccagctggtgtcagtgctgagggaggtgaggtacctgtctgggagccagctgggaac
catcccccctgctgcagcagacatctactgctgcaaggagtcctactgggagctggtggc
caagctggagctgatggtgagcagctacaacaaggtcctgaggacagtgctggaggtgga
ataccctctcatccagggccagctgcaggacattgacttgaagctgaaagaagcagaaga
aagcctgaactggaagatggagggggtctgggatcacatctccagggtggtggatgctat
ccaggaccttgagcagaggacacagagagccagagacaacgtggaggagatccagaccac
ggtgcagtcgtgggtggcacccatccttgagaggaaagactccaaaaaggagtccctgct
gagccttgaggactgccagggccagctggagagacactacagcctggtcagggagtcagg
gcagaggattcactcactgctgaaggaaaaccagagcctcttgctggcagacccagcatc
tgacatctggaaggcctatgtggagtacttggatgagatagtcctggatggattctacag
tgccactgagtgctctctcaagtacctcctggataacacagatcccgaggcagggcttgc
tcccctgttcgaggtgcagctggacttggtggagccagagctggttttccatccctcctt
ggaccctggtgcgagcgatggcttctatgagatgatggaaagcctcctggccggcatcta
ccgcagctcctcgctggtgccgcggctggcccagcacagcggctgcccgcactaccagcg
ctccctgctgagcgccgtccgcaggcgcagcctggtgttcaagcagcatctcgtggacca
cgtcacacacagcttggctgacctggaggagttcatcaaaactgctgacaagggtttgag
caagaaggtagaaaaaggagactctgatggcttggtggaggtcatggggcacctcctggc
tgttaaagaaaggcagaatgtcactgatgccatgtttgagcccctgaagcaaaccattga
gctgctgatgtcctatgagcaaccactgccagaggaggtctacagacagctggagttcat
gaggtttgacacccagaagccttatgagctgctggatgccaagcaggtggagattaaagc
aatggaggcagccatgggctccatccaggaagcagctgggctctttgaagtcatggtgcc
agactacaaacagctgaggcagtgcaggaaggagctgtgtctgctcaaagagctctggga
catgatctcccttgtcaacaccacccttgaggcctggcagaccaccaagtgggcggcaat
cgacgtggagagcatggatctggagtgcagaaggtttgccagagagctgaggagtctgga
caaggaggtgaggggctgggacgccttcagcgggctggacggcagggtgaggaacacgct
gcgggcgctgcgggccgtggccgagctgcagagccccgccatcagagacaggcactgggg
ccagctggtgcagctgacaggggtgagctttgtgatggactccaccaccaccctggctga
cctcctgcggctcaacctgcacgacttcgaggacgaggtgcgcggcatcgtggacagggc
ggcgcgggagatgggcatggagaaggtgctgggggagctgcagctgacctggggctccat
ggagttccgctatgagcctcaccccaggagcggcgtcccgctgctgaagccggatgtgga
gctcctggaaaccctggaggacaaccaggtgcagctgcagggcctgctgagctccaaggg
catcgctttcttcctggaggaggtggccggctggcagcggaagctggccgccgccgactg
cgccatcggcctctggttccaggtgcagcgcgcctgggctcacctggagagcatcttcct
gggctcagaagatatacagacacagctgccccaggactccaaacgcttcgaggggatcga
tgtggacttcagagagctggcctgggaggcccagagaaccccaaacgtgctggaggcccc
ttctctgccctcctgtcccaggctctgctcacctgctttgtcccccaggttgttgctgtg
tgagaaggctttggctgagtatttggacatgaagaagttggccttccccaggttctactt
catttcttctgcagatttattggatatcctctccaatggcaccaacccccagctggttca
gaggcatcttcccaaactctttgacagcttggccaggctggaattccagctggattctga
gcagaagccaaccaaggtcgggctggggatgcacagtggagaggaggagtacgtcagctt
cagccagccctgcgactgcagcggccaggttgaggtctggctgaaccatgtgctggacag
catgagggccacagtgagagcccagatggcagaagctgtcatggcttatgaagagaagcc
aagggagcagtggctctttgactaccctgcccaggtggccctcacctgcagccagatctg
gtggaccaccgaggttgggatcgccttcagcagggtggaggagggctatgagaatgccat
gaaggagtaccacaagaagcaggtggcccagctgaacagcctggtgaccatgctgctggg
acagctctccaagggggacaggcagaagatcatgaccctgtgcaccatcgacgtgcacgc
cagggacgtggtggccaagatgatagcgcagaaggtggacagcgcccaggccttcctgtg
gctgccccagctgctgcacaggtgggcagaggaggaggggcactgctatgccaacatctg
tgatgcccagttcctgtactcctacgagtacctgggcaacacgccgcggctggtgatcac
ccccctgaccgacaggtgctacatcaccctgacccagtctctgcacctcaccatgagcgg
agcccccgcgggccctgcgggcactggcaagaccgagaccacgaaggacttggggcgagc
cctgggcatcatggtctatgtcttcaactgctctgagcagatggactacaagtcctgtgg
gaacatttacaaaggccttgcccagacaggagcctggggctgctttgatgaattcaacag
gatctcagttgaggtcctgtctgtggtggctgtgcaggtgaagagtgtgcaggatgcact
ccgggagaagaagaaatccttcactttccttggggaggagatcaggctggtgccctcagt
gggcatcttcatcaccatgaaccctggctatgcagggaggactgagctgcctgagaacct
aaaagctctcttcaggccatgtgccatggtggtgccagacctggagctgatctgtgagat
catgctggtggctgagggcttcctggaggcgcgggcgctggccaggaagttcgtcgctct
gtaccggctctgcaaggagctgctgtccaagcaggatcactacgactggggcctgcgcgc
catcaagtcggtgctggtggtggccggcgcgctgcgcagagcggagccggggcggccgga
ggagcaggtgctgctgcgctccctgcgcgacgccaacctgcccaaggtggggggcgatga
cctcccggtggtgcagctggaggagctgctgagcgtccggcactccgtcttcgtggtggg
cagcgccggcacaggcaagtcccaggtgctgagggccctgcacaggacctaccagatcat
gagcaggagaccagtctgggcagacctcaaccccaaggctgtcaccaacgatgagctctt
tggcatcatcaacccttcaacaggagagtggaaggatgggctgttctcatccatcatgag
agagctggccaacatcacccatgatggacccaagtggatggtactggatggagatattga
tcctatgtggattgaatcacttaatactgtgatggatgataacaaggtgctgaccctggc
aagcaatgagaggatccccctgcccccgagcatgaggctgctgttcgagatcagccacct
gcgcacggccacccctgccaccgtctccagggcaggcatcctgtacatcaacccctcaga
cctgggctggagccctccagtcagcagctggattgacaggagggagatccaggctgaacg
agccaacctgaccatcctgtttgacaagtacctgcctgcctgcctggacaccctcaggac
gagatttaagaaggtcactcccattcctgagcagagtgtgattcagatgctgtgctacct
gctggagtgcctgctgacagagcagagcacacctcctgactgccccaaggagctctatga
gctctacttcgtcttcgctgccgtctgggccttcggtggatctctgtttcaagaccaggt
nnnnnnctacagggtggagttcagcaagtggtgggtggcagagttcaagaccatcaagtt
tccctcccagggcacagtctttgactactacatcgatccagagacaaagaagtttgagcc
ttggtctaaacttgttccccactttgaatttgacccagaaatgccattacaggtgagtga
cccttgcaggcctttggtctgggtnnnnnnnnncgcccgctggcggctggggggcagcgc
cggcaccggcaagaccctgctgctgcagcacagcctcagcctgctgcccccacaggcata
cctgctgcagaaggtccccctcaactactacaccacctctgccatgctgcaaggtgtcct
tgagaagcccctggagaagaaggctggcaggagctatggcccagcaggcagcaagcagct
ggtgtacttcattgatgacctcaacatgccccaggtggatgcctacggcacagtgcagcc
ccacaccctgctcaggcagcacctggactatggccactggtaggaggctacctgggctgg
gttagattggacctttctgaccatggctccttctcagccatgctggaatcacacagcctc
ttctgtgtctttcctttctcttcctcagcgtcacttctgcacctttgctgtctccatgcc
tggccaggaggccttggccaggatctacagcaccatcctcatgcagcacctgtccagtgg
cagtttctcaggggctgtgcagaagtcagctcagcagctggttgccctggccctggccct
gcaccagaaggtggctgctgccttcctgcccacagccatcaagttccactatgtgttcaa
cctgagagacctctccaacatcttccagggcctcctgttctccagccctgagtgtgtgca
gcagccccaagacctggtgaagctgtacctgcacgagtccagccgggtgtacagggacag
gatggtggaggagaaggactctgcagcctttgacaggatccagctggagatggtgaagag
gttctatgatgacatggaggacactctagagcaggccaagagactgaacatctattgcca
ctttgctaagggtgtaggggagcccagctacaggccagtgccatcctgggaggagctgca
ccagatccttgtggaagccttggacaactacaatgaagtcaatgctgccatgaacctggt
gctgtttgaggatgctatgtgccatgtctgccgcatcagccgcatcctgcaggggccccg
cgggaacgcgctgctgctcggcgtgggcggcagcggcaagcagagcctggcccggctggc
agccttcatcagcgccctgcaggtgttccagatcgctctgaggaagggctatggcatccc
tgacctgagggcagacctggcgagcctgtacctgcaagccggtgtgaagaacgtgggcac
cgtgctgctgctgagcgaggcacaggtggctgaggagcagttcctggtgctggtgaacga
cttcttagcaacaggtgaaatccctgacctcttccctgaggaggaggttgagaacatcat
cagcagcctgaggagcgaggtgagggcccgggggctgctggactccagggacacctgctg
gaggttcttcattgagagagtgcagcggcagctgaaggcctccctgcagggctccatcag
ccagttcctggcccatgtgcacagcagcgtcagccaggcctcccagctctaccgcagccg
ccagcgccgctacaactacaccacccccaagtccttcctggagcagatcaaactctacca
cagcttgctgagcagaaagggcaaggacctgaaagcaaagatggagaggctgcagaatgg
cctggagaagctgaacagcacctctgcccaggtggaggagctgaaggccaagctggcagt
gcaggaggtggagctgaagcagaagaacgatgatgctgacaaactgatccaggtggtggg
ggtggagacagagaaagtgagcaaggaaaaggcagtggctgatgaggaggagcagaaggt
ggcactcatcacccaggaggtggagcagaaacagaaggactgtgaggaggacctggccaa
agctgagcctgccctggtagctgcccaggaagcactgaacaccctcaacaagcgcctcag
tgagaacctgaggaagctcacagccaggtttgagaaggccacagcagacaagctcaagtg
tgagcaggaggctgaggcgacagcctgcaccatcgccctcgccaaccgcctggtcggggg
ccttgcctcggagaaggtgaggtgggctgaggctgtgaaggacttgcagcagcagcagag
cagcttgtgtggagacctgctgctggtgtcagcctttgtgtcctacctgggctacttcag
ctggaagtatcggcaggacctgctggagggcagctggaagccctacttgcagcagctgca
gaggaaagggaggagcagtgactgggaggggcccagcagcagggaggccaccgtgggcca
gcgctggcccctgctggtcgacccccagctgcagggcagcagctggatcaaagccaggca
cggggaggagctgcggctgatccgcatggggcaggaggggtatctggagaggctggaagc
agccctggctgcaggggatgtggttctgcttgagaacctggaggagtctgtggaccctgt
gctgggacccttgctggggagagaaaccatcaagaaaggaaggtgcctcaggcttgggga
cagggagtgtgacttcaacccctccttccgcctgatcctgcacaccaagctgcccaaccc
ccacttcccccccgagctgcaggcccagtgcaccctgatcgacttcagcgtcagcaggga
gcaggggtgctcagaacctcaggccacagcagcactctgccacgtgtgggttctgccctg
gcctggcattcagggcaggctgaagcagtcagagctcacaaagcagcagaacagcttcaa
gatcaccctgaagagcctggaggacaacttgctgtccaggctgtcctcagcatcaggcaa
cttcctgggggacactgccctggtggagaacttggagaccaccaagcagacagctgcaga
gattgaagagaaggtgcaggagtccaaggtgacagaggccaagattaacgaggccaggga
gcactacaggcctgcagctgccagggcctctctgctctacttcatcatgaaggacctcca
caccatccaccccatgtaccagttctctctgaagatggcaattggccactggcccttcct
cagctggctctccgctgccgagagcctctcggggcgcctggagaggctgctggacagcat
caccttcagtgccttccagtacaccacccgagggctctttgagtgtgacaagctgaccta
cactgctcagctcaccttccagatacttctgatgagtcaagagatcagcccagtggaact
ggacttcctgctggggtccccagcagagcctggagccacaagccctgtggagttcctgtc
tgaccactcctggggaggaatcaaggctctgtcggccatggagcagttccggagcctgga
ccgggacatcgagggctctgccaggcgctggaggaagtttgtggaatctgagtgtcctga
aaaggagaaattccctcaggagtggaagaacaaaacagctctgcagcagctctgcatcct
gagagccctgcggccggaccgcatgacctacgccctcagggattttgtggagcagaagct
gggcagcaagtacgtggtggggagacccctggactttgcagcgacctttgaggaatcagg
acctgcaacccccctgtttttcatcctgtccccaggagctgacccactgaaggatgtgga
gaaacaagggaggaaacttggttacacattcaacaacaggaacctccacaacgtgtccct
tgggcaaggtcaagaggtggttgctgaacgagctctggagctggctgccaaggaggggca
ctgggtcatcctgcagaacatccacctggtggccaagtggctgagctccctggagaagca
gctggagcggcacagtgagggcagccacccggggctgcgcgtcttcctgagcgcccagcc
ctccccctgccccctcagccactgcatcccccaggccatcctgcagagctccatcaagat
caccagcgaggcccccagcggcatgcaggccaacctgcaccaagccctggacaacttcag
ccaggacaccctggagctgtgcagcagggagaaggagttcaggagcatcctctttgccct
ctgctacttccacgccgtggtggctgagcggcgcaggtttggcccccagggctggaaccg
cccctaccccttcagcaccggggacctcaccatctctgtcaacgtgctccacaactacct
ggaggccagccccaaggtgccctacgctgacctgcgctacctctttggggagatcatgta
tggaggccacatcactgatgagtgggacaggaggctgtgcaggacgtacctggaggagtt
cattaagccagagatgatggagggagagctcctcctggccccaggattccccctcccggg
caccatggactacaatggctaccatcag
DBGET
integrated database retrieval system
