Dryobates pubescens (Downy woodpecker): 104302533
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Entry
104302533 CDS
T08526
Symbol
DENND4B
Name
(RefSeq) DENN domain-containing protein 4B
KO
K20163
DENN domain-containing protein 4
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpub04131
]
104302533 (DENND4B)
Membrane trafficking [BR:
dpub04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
104302533 (DENND4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TORC_M
DENN
uDENN
dDENN
PPR_2
TORC_C
PPR_3
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
104302533
NCBI-ProteinID:
XP_009901350
LinkDB
All DBs
Position
Unknown
AA seq
1693 aa
AA seq
DB search
RVPGGVHSSCSAPGSPLALNEPHIDSSPYGPTYLSPPPEPSWRRTMPWGNFPMEKGHLFR
LPSALNRTNSDSALHTSVMNPTPQDAYLGPGQGVPAPGRRSGFLDGDVDNKVPPIEETFD
DSKHSLKPWDTKKLSSSSARPRSCEVPGIHIFPSPDQPASIPLIPSALNTGGSLPDLTNL
HFPSPLPTPLDPDESPYPSLSGGNSTSNLANTMTHLGISGGMGLGPAYDSPGLTSPMQSS
LSNPSLQSSLSNPNLQASLRSPSLQSSLSNPSLQSSQSSSSIPSSLSNQSLPSSLSSSLS
NPSLPTSPRSQPLQSSPSNPSLPSGLSGSSYPLVQASITTSPRRRVPLSPLTLPMGGDSR
RQHPKQFSPTMSPTLSSITQVCMEPPPGPAPLLRSPPPLSCPSPSSSQPRAREAPAPQHV
PPSAAPQRPYAHQYQHQQHEPSLQQQLAQQPLWNFSLGSFDQFGMGESPTGNSSSFPEEL
GTLSYPPPEGSYDPQVLNRQNLSNCGRHGPIPNIILTGDSPPGISKEIATALAGVPGFEE
GRQQRAARPSEHITDVAVIIRSQGEEVPHGFTCIETTTSGHPVDLNAGLLNNPQMFICYK
RSRDKPPLIELGVHYEGKDRPKPGYKILDTTPYSRSANLNSGGPGHQRTFLTYRRAAEPH
GHSTLGVTDICLIMPSKGESTPHTFCRVDKNLNTSMWGPALYLCYKIAMAKANTLVYEAG
LLGRYPEQDSEAFPLPESVPVFCLPMGATIESWPDDTKYPLPVFSTFVLTGASGDKVYGA
AIQFHEAFPRERLSERQSLRLGLLSVVDRRPVPGRSLQARKSICVLSHWPFFDVFRKFLM
FIYRYSISGPHVLPLETHISHFMHNVPFPSPQRPRILVQMSPYDSLLLCRPVSSPLPLSG
ASFLTLLQNLGPDNAVALLVAVLTEQKLLIHSLRPDVLTSVGEALVAMIFPLRWQCPYIP
LCPLALADVLCAPVPFIVGIHSSYFDLYEPPRDVIFIDLDTNTICHHQSEERKLLSPRSL
PRRPCKVLLATLHSLSQQLDEMYSGPGDEASLELLLSDAEAARGRRAQLELEARAAFLRF
MACALRGYRSFLRPIAPAAAARDTGSLFSLQGFLKSRERAYHRFYGQLLRTQLFTQFIED
CSFASDRDPCLEFFDTCVDKVQVELEKPEDTPLMELDDPRGGEHTVFITPPEQPAAPDGS
ELPARYRYDSFPTLRPELLEPPRDPLVAQLCQARSSAPSSPAPRRTKQEMKVAQRVAQKY
SSVPDMWAKCLLGHCYGLWFLYLPTHVRAAPAKLRALQLAYDVLRKMEAHKVVLPDEVCY
RILMQLCGQYGEPVLSVRVLLEMKRAGIVPNTITYGYYNKSSVSLGSELDLSDTSVGSVG
GPKAELQPEGASGQEQPTVEVLLSSCSRCQGCGALVYDEEVMAGGTSDDSNLNTTCPFCA
RSFVPFLSIEIQDFQPSPSFPRSTAEDGSPAPAAAQGPVLSDRRRCLALDEGEPELCNGY
PETAPRRSERVAFAYLSPLVLRKELESLVENEGGELLAQPELVDSHPIIYWNLVWYFQRL
ELPSNLPRLLLGSQHVTLAPQLLDAPSVRVRLLWDVLTPEPDSCPPLYVLWRLHSNVPTR
LQSWRPHGHPFSLAFLEALLSHVGLNEVHKAIALFLETLAAPGGPRHLQRSIYRELLFLT
LAALGRDHTDIGP
NT seq
5084 nt
NT seq
+upstream
nt +downstream
nt
gcagggtcccaggaggtgtccacagcagctgctcagcccctggctctccgctggccctta
acgagcctcacatcgacagctctccctatggacctacctacctgtcccctccacccgagc
ccagctggaggaggaccatgccctgggggaacttccccatggagaagggacatctgttcc
gcctgccctcggccctcaacagaacaaactcagactcagccctgcacaccagtgtcatga
accccaccccccaggatgcctacctgggccccgggcagggggtgccagcccccggccgcc
gcagcggttttctggatggggatgtggacaataaagtgcctcccatcgaagagaccttcg
atgacagcaagcactctctgaagccctgggacaccaagaagctctcctcatcctctgccc
ggccacgctcctgcgaagtccctgggatccacatatttccatccccagaccaacctgcca
gcatccctctcatcccctcggccctcaacaccggcggctcccttcccgacctcaccaacc
tgcacttcccctccccgctgcccacccccctcgacccggacgagagtccctaccccagcc
tgagtgggggcaacagcaccagcaacctggccaacaccatgacacacctgggcatcagcg
ggggcatgggcctgggccccgcctacgactcgccaggacttacctctcctatgcagagct
ccctgagtaacccctccctgcagtcctcgcttagcaaccccaacctccaggcctccctgc
gcagcccctcgctccagtcctccctcagcaacccctcgctccagtcttcccaaagcagtt
cctccatcccctcctcgctctccaaccagtccctgccttcctccctctcctcctcgctca
gcaacccctccctgcccacgtccccccgcagccagcccctccagtcctcccccagcaacc
ccagcctgccctccggcttgagcggctcctcctaccccctggtgcaggcctccataacca
cctcgccccgccgacgggtcccgctcagccccctcaccctccccatgggtggcgactcca
gaaggcagcaccccaaacagttctcaccaacaatgtcacccacattgtcctccatcaccc
aggtatgcatggagccaccgcccggccctgcgccgctcctccgctcccctccacctctct
cctgtccgtctccatcctcatctcagccacgcgccagggaagcccccgcgcctcagcacg
tgccgccgagcgcagccccgcagcgcccctacgcccaccagtaccagcaccagcagcatg
agccctccctgcagcagcagctggcgcagcagcccctgtggaacttcagcctgggcagct
ttgaccagtttgggatgggggagagccccactggcaacagcagcagcttccctgaggagc
tggggaccctgagctaccctccccccgagggcagctacgacccccaggtcctgaaccggc
aaaacctcagcaactgcggccgccacggccccatccccaacatcatcctgacaggagatt
ccccccctggtatctccaaggagatcgccacggcgctggccggcgtcccgggcttcgagg
agggccggcagcagcgggcggcgcggcccagcgagcacatcaccgacgtggcggtcatca
tccgctcgcagggcgaggaggtgccccacggcttcacctgcatcgagaccaccacctcgg
gccaccccgtggacctcaacgccgggctgctcaacaacccccagatgttcatctgctaca
agcgcagccgggacaagccccctctcatcgagctgggggtgcactatgagggcaaggacc
gcccgaagccgggctacaagatcctggacacgacgccctacagccgctcggccaacctga
actcggggggccctgggcaccagcgaaccttcctgacctaccggcgggcggccgagcccc
acggccacagcacgctgggggtcactgacatctgcctcatcatgcccagcaagggcgaga
gcaccccacacaccttctgccgggtggacaagaacctcaacaccagcatgtggggtcctg
ccctgtacctgtgctacaagatcgccatggccaaggccaacaccctggtctatgaagcag
ggctgctggggcgttaccccgagcaggacagtgaggccttccccctgcccgagtcggtgc
ctgtcttctgcctgcccatgggggccaccatcgagagctggccagatgacaccaagtacc
cgctgcctgtcttctccaccttcgtgctgaccggggcctcgggagacaaggtgtacggag
cggccatccagttccacgaggccttcccgcgggagcggctgtcggagaggcagagcctgc
ggctggggctgctgagcgtggtggacaggcggccggtgccggggcgctcgctgcaggcgc
gcaagagcatctgcgtcctgtcccactggcccttcttcgacgtcttccgcaagttcctga
tgttcatctaccgctactccatctcgggcccccacgtgctgcccctcgagacgcacatct
cccacttcatgcacaacgtccccttcccgtccccgcagcgccctcgcatcctggtccaga
tgtccccctatgacagcctgctgctgtgccgcccggtgtcctccccgctgccgctcagcg
gtgccagcttcctgacgctgctgcagaacctgggccctgacaacgcagtggcactgctgg
tggctgtcctgaccgagcagaagctgctcatccactccctgcgcccggacgtcctgacca
gcgtgggcgaagccctggtggcgatgatcttccccctgcgctggcagtgcccctacatcc
cgctgtgcccgctggcgctggctgacgtgctgtgtgcccccgtgcccttcattgtaggca
tccactccagctacttcgacctctacgagccccccagggacgtcatcttcatcgacctgg
acaccaacaccatctgtcaccaccagagcgaggagcgcaagctgctgtccccccgttccc
tgccgcgccggccctgcaaggtgctgctggccacactgcacagcctctcccagcagctgg
acgagatgtacagcggtcctggggacgaggcgtcgctggagctgctgctgagtgacgcag
aggcagctcggggccgcagggcgcagctggagctggaggctcgcgcagccttcctgcgct
tcatggcctgcgccctgcgtggctaccgcagcttcctgcgccccatcgcgcccgccgccg
ccgcccgtgacaccggcagcctcttctccctgcaagggttcctcaagtcccgggagcggg
cgtaccaccgcttctacgggcagctgctgcgcacgcagctcttcacgcagttcatcgagg
actgctccttcgccagtgaccgtgacccctgcctcgagttcttcgacacctgtgtggaca
aggtgcaggtggagctggagaagccggaggacaccccactgatggagctggatgaccccc
gggggggtgagcacaccgtcttcatcacccccccggagcagcctgcggcccctgatggct
ctgagctgcctgcgcggtaccgctatgacagcttccccaccctgcggccggagctcctgg
agcccccccgggacccactggtggctcagttgtgccaggccaggagcagtgctcccagca
gcccagccccacgcaggaccaagcaggagatgaaggtggcccagcgggtggcccagaagt
actcctccgtgcctgacatgtgggccaagtgcctgctgggccactgctatgggctctggt
tcctctacctgcccacccacgtccgtgccgcccctgccaagctgcgggcactgcagctgg
cctacgacgtcctgcgcaagatggaagctcacaaagtggtgctgccagacgaggtgtgct
accgcatcctgatgcagctgtgcgggcagtacggggagccggtgctgtcggtgcgagtgc
tgctggagatgaagcgcgctggcatcgtgcccaacaccatcacctacggctactacaaca
agagctcagtctcgctgggcagtgagctggacctgtcagacacctctgtgggcagcgtcg
gcggtcccaaggctgagctgcagcccgaaggggcgtctgggcaggagcagcctaccgtgg
aggtgctgctgtccagctgctcgcgctgccagggctgcggcgctctggtgtacgacgagg
aggtcatggcaggggggacctccgacgactccaaccttaacaccacctgccccttctgcg
cccgctccttcgtccccttcctcagcatcgagatccaggacttccagccatccccctcct
ttccacgcagcacggctgaggacggctcccctgctcctgccgccgcgcagggcccggtgc
tgagcgaccgccgccgctgcctggcgctggacgagggcgagccggagctgtgcaatggct
acccggagacggcgccgcggcgctcggagcgagtggccttcgcctacctgagccccttgg
tgctgcgcaaggaactggagagcctggtggagaacgagggcggagagctgctggcgcagc
cggagctggtggacagccacccaatcatctactggaacctggtctggtacttccagcgcc
tggagctgcccagcaacctgccccgcctgctcctgggctcccagcacgtcaccctggctc
cgcagctcctcgacgcccccagcgtccgtgtccggctgctctgggatgtcctgacccccg
agcccgacagctgccccccgctttatgtcctctggaggcttcacagcaacgtccccacac
ggctgcagtcctggcggccccacggccaccccttctcgctggccttcctggaagccctgc
tgagccacgtggggctgaacgaggtgcacaaagccattgccctcttcctcgagaccctgg
cagccccaggcggcccccggcacctgcagaggagcatctaccgggagctcctcttcctca
cgctggcggcgctgggcagggaccacacagacatcggcccatag
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