Dryobates pubescens (Downy woodpecker): 104302613
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Entry
104302613 CDS
T08526
Symbol
PCDH17
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-17
KO
K16499
protocadherin delta 2
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dpub04515
]
104302613 (PCDH17)
Cell adhesion molecules [BR:
dpub04515
]
Cadherins
Protocadherins
104302613 (PCDH17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
104302613
NCBI-ProteinID:
XP_009901437
LinkDB
All DBs
Position
Unknown
AA seq
1178 aa
AA seq
DB search
MYLSICCFFLCWAPALSLKNLNYSVPEEQGAGTVIGNIGRDARLAAGTAGGGVLPAERGA
PGGSSGRGPKSTFRVLENSAPHLLDVDGESGLLYTKQRIDREALCRRSAKCQLSLEVFAN
DQEICMIKVEIQDLNDNAPAFPSDQVDMDISENAAPGTRFPLTSAHDPDAGDNGLRTYLL
TRDDYGLFSLDVKSRGDGTKFPELVIQKPLDREEQSHHTLVLTALDGGDPPRSGTVQINV
RLIDSNDNSPIFEAASYVVELPENAPLGTAVIDLNATDADEGTNGEVLYSFSGYAPERVR
DLFSIDPQSGLIRVKGNLDYEESGLIEIDVQARDLGPNPIPAHCKVTVRLIDRNDNAPTI
GFVSVRQGALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGGPGAVPFTLEENYDN
FYTVVTDRPLDREAQDEYNVTIVARDGGNPPLNSTKSFSVRILDENDNPPRFSKNLYVLQ
VPENNIPGEYLGSVLAQDPDLGQNGTVSYSILPSHVGDVSIYTYVSVNPTNGAIYALRSF
NYEQTKHFEFRVLAKDSGSPHRESNATVRVTVLDVNDNAPLIVLPALINDTAELQVPRNA
GVGYPVGTVRALDSDFGESGRLTYEIVEGNEEHLFEMDPTSGEIRTLHPYWEELSPVAEL
VVKVSDHGKPSLSAVAKLIVRALAGPLPGWGAKQVNGEQHRRPHWDLSLPLIVTLSTVSI
ILLAAMITIAVKCKRENKEIRTYNCRIAEYSHPQLGGGGGNGGGGGGSGSGGSKGKKKKI
SKNDIMLVPSEGEDSRGPLNVMNVVSSPSLATSPMYFDYQTRLPLSSPRSEVMYLKPASN
NLTVPQGHVGCHTSFTGQGTNATEAPPSRMSIIQTDNFPAEPNYMGSRQQFVQSSSTFKD
PERASLRDSGHGDSDQADSDQDTNKGSCCDMSVREALKMKTTSTKSQPLEQEQEECVNCT
DECRVLGHSDRCWMPQFPAASQAENADYRTNLFVPTVEANVETETYETVNPTGKKTFCTF
GKDKREHTILIANVKPYLKAKRALSPLLQEVPSASSSPTKTCIEPCTSTKGPLDGCEVKS
GALAEPNSQYLSTDSQYLSPSKQSKDAPFIASDQMARAFADVHSRVSRDSSEMDSVLEQL
DRSARDLGRESVDAEEVVREIDKLLQDCRGSDPVAVRK
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgtacctttccatttgttgcttcttcctctgttgggctcccgccctgtcgctgaagaac
ctgaattactcggtgccggaggagcagggagcaggcacggtgatcgggaacatcggccgc
gatgcgcgcttggcggcgggcacggcgggaggcggggtgctgcccgcggagcgcggcgct
cccggcggcagctccggccgcggccccaagtccaccttccgggtgctggagaactcagcc
ccacacctcctggacgtggacggagagagcgggctgctctacaccaagcagcgcatcgac
cgggaggcgctgtgccggcgcagcgccaagtgccagctgtccctcgaggtgtttgccaac
gaccaggagatctgcatgatcaaagtggagatccaggacctgaacgacaacgcaccagcg
ttcccctctgaccaagtggacatggacatctcagaaaatgctgcaccgggtacccgcttc
cccctcaccagcgcccatgatccagacgctggggacaacgggctgcgcacctacctgctc
acccgtgatgactacggcctcttctcccttgatgtgaagtctcgtggtgatggcacaaag
tttccagagctggtcatccagaaaccattagaccgtgaggagcagagtcaccacaccctg
gtgctgacagctctggatggtggtgacccaccacgctcaggcacagtgcaaatcaatgtg
cgcctcattgactccaatgacaacagtcccatctttgaggcagcctcctatgtggtagag
ctgccagaaaatgcaccactgggcactgctgtcatcgatcttaatgccactgatgccgat
gagggtaccaatggagaggtgctctactccttcagtggctatgcacctgagcgtgtccgt
gacctgtttagcattgatcctcagagtggcctcatccgtgtcaagggcaacttggactat
gaggagagtggcctcattgagattgatgtccaggctcgagacctgggccctaatcctatt
cctgctcactgcaaggtcaccgtccgcctcatcgaccgcaatgacaatgcacccaccatt
ggttttgtctccgttcgccagggagcactgagtgaggctgccccaccaggcactgtcatt
gccctggtgcgggtcactgaccgtgactcaggcaagaatgggcagctccagtgccgggtg
ctgggtggtggtggtgggcccggagcagtccctttcaccctggaagagaactatgacaac
ttctacactgtagtcactgaccggcccctggaccgcgaggcacaggatgagtacaatgtg
accattgtggcacgtgatgggggcaatcccccactcaactccaccaaatcgttttccgtc
cgtattcttgatgaaaatgacaatccaccccgcttcagcaagaacctttatgtgttacag
gtgcccgagaacaacatccctggagagtacctaggctccgtcttggcccaggaccctgac
ctgggccaaaatgggacagtctcctactccattttgcccagccatgtgggtgatgtctcc
atctacacctatgtctccgtcaaccccaccaatggtgctatctatgccctgaggagcttc
aactatgagcagacaaagcactttgagtttcgtgttctggccaaagactcgggttcgccc
caccgtgaaagcaatgccacggtgcgcgtcactgtgctcgatgtcaatgacaatgcaccc
ctcatcgtcctgcccgctctcatcaatgacactgcggagctgcaggtgccacgcaatgct
ggggtgggctaccctgtgggcactgtacgtgccctggacagtgactttggggagagtggt
cgcctcacatatgaaattgtggaaggcaacgaggagcacctctttgagatggaccccact
agtggtgagatacgcaccttacacccctattgggaggagctcagccctgtggctgaactg
gtggtaaaagtcagtgaccacggcaagcccagcctctcagcggtggccaagctcattgtc
agggccttggcggggcccctccccgggtggggggccaaacaggtgaatggcgagcagcat
cggcgaccacactgggacttgtcgctgcccctgatcgtgacactgagtactgtctccatc
atcttgctggctgccatgatcactattgcagtgaagtgcaagcgagagaacaaggagatc
cgcacctataattgtcgcattgccgagtatagccaccctcagctgggaggagggggaggc
aatggcgggggaggaggaggcagtggcagtggagggagcaagggcaagaagaagaagatc
agcaagaatgacattatgctggtgcccagtgagggtgaggacagccggggccccctcaat
gtcatgaacgtggtgagcagcccatccctggccacctcacccatgtactttgactaccag
acccgcctgcccctcagctctcccaggtcagaggtgatgtacctgaagcccgcctccaac
aacctgactgtaccccagggacatgtgggttgccacaccagcttcacagggcaagggact
aacgccaccgaggctcccccgagccggatgtccataattcagacagacaattttcccgca
gagcccaattacatgggcagcaggcagcagtttgttcaaagtagctccacgttcaaggat
ccagaaagagccagcttgagggacagcgggcatggggacagtgatcaggctgacagtgac
caagacactaacaaaggctcctgctgtgacatgtctgttagggaggcactcaagatgaaa
actacttcaactaaaagccagccacttgaacaagagcaagaagaatgtgttaactgcaca
gatgaatgcagagtgcttggtcattctgacaggtgttggatgccacagttccctgcagcc
agtcaggctgagaatgcagattatcgcacaaatctctttgtacccacagttgaagctaat
gttgagactgagacatatgaaactgtgaatcccactgggaaaaagactttttgtacattt
gggaaagacaagagagagcacactattctcattgccaatgttaaaccttacttaaaagcc
aaacgtgccctgagtcctctgcttcaggaggttccctcagcatcgagcagcccaaccaag
acatgcattgagccttgcacctcaacaaaaggaccgttggatggttgtgaagtgaaatca
ggagccttggctgaaccaaacagccagtacttgtcaactgacagtcagtatctatcgcct
agtaaacagtcaaaagacgctcccttcattgcatcagatcagatggctagggcctttgca
gatgtgcattcccgagtgagccgagactcgagtgagatggactctgttctggagcagtta
gaccgttcagcccgggatctaggcagggagtcggtggatgcggaggaagttgtgagagaa
atagacaagctcttgcaggactgtcggggaagtgaccctgtggccgtcagaaagtga
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