KEGG   Dryobates pubescens (Downy woodpecker): 104302723
Entry
104302723         CDS       T08526                                 
Symbol
NLE1
Name
(RefSeq) notchless protein homolog 1
  KO
K14855  ribosome assembly protein 4
Organism
dpub  Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:dpub00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dpub03009]
    104302723 (NLE1)
Ribosome biogenesis [BR:dpub03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    104302723 (NLE1)
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 EIF3I WDR55 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_EML NLE NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 Beta-prop_HPS5 eIF2A PD40 RMC1_N Beta-prop_SPT8 WD40_RFWD3 Ge1_WD40 WDR54 Beta-prop_WDR75_2nd Beta-prop_NWD2_C Cytochrom_D1 PALB2_WD40 FAD_binding_9
Other DBs
NCBI-GeneID: 104302723
NCBI-ProteinID: XP_009901558
LinkDB
Position
Unknown
AA seq 475 aa
MSPDEDVQRLLIQFRDEAGETLGSPFDVPVTITPDKLQLVCNALLQKDEPVPLAFFVHDA
EIVASLEKTLVGQSVETEKVLDIIYQPQAVFRVRAVTRCTSSLEGHTEAVISVAFSPTGK
YLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDGKKLASGCKNSQIFLWDPAT
GNQIGRALTGHSKWITCLCWEPLHINPECRYLASASKDGSIRIWDTLLGRCDKILTSHTQ
SVTCVKWGGDGLLYSSSQDRTIKVWRSQDGVLCRTLQGHAHWVNTMALSTDYVLRTGAFE
PAEATINPQDVRGSLVELKKRAQQRYDQVRGQEPERLVSGSDDFTLFLWRPAEDKKPLER
MTGHQALINQVLFSPDTRIIASASFDKSIKLWDGRTGKYLTSLRGHVSAVYQISWSADSR
LLVSGSSDSTLKVWDAKTKKLAIDLPGHADEVYATDWSPDGQRVASGGKDKCLRM
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgtcgccggacgaggatgtacagcggctcctgatccagttccgggacgaggcaggggag
accctgggctccccttttgacgtccctgtcaccatcaccccagacaagctgcagttggtc
tgcaatgccctcctgcagaaggatgagccggtgcccttggctttctttgtccatgatgct
gagatcgtggcatcgctggagaagaccctggtggggcagagtgtggagacagagaaggtc
ctggacatcatctaccagccgcaggcagtgttcagggtgcgggcagtgacccgctgcacc
agctcgctggaaggacacaccgaggctgtcatctctgtggccttcagccccacgggaaag
tacctggccagcggctctggagacaccactgtccgcttctgggacctcagcacggagacg
ccacagttcacagccaaaggtcaccggcactgggtgctcagcattgcctggtcacctgat
ggcaagaagctggcctcaggctgcaagaacagccagatatttctctgggacccagccacc
ggcaatcagatcggccgggcgctcaccggccactccaaatggatcacatgtctgtgctgg
gaaccactccacataaacccagagtgccggtacctggcgagtgcctccaaggatggcagc
atccgcatctgggacaccctgctgggcaggtgtgacaaaatcctcaccagccacacgcag
tctgtgacgtgtgtgaagtgggggggcgatggtttgctctactcctcctcccaggacagg
accatcaaagtctggagaagccaggatggggtcctctgccgcaccttgcagggccatgct
cactgggtcaacaccatggccctcagcaccgactacgttctccgcaccggtgccttcgaa
cctgctgaggccaccatcaacccacaggatgtgagaggctccttggtagaactgaagaaa
agggcacagcagaggtatgaccaagtccggggccaggaaccagagaggctcgtctcaggg
tcagatgacttcacgctgtttctttggagaccagcagaagacaagaagccactggagaga
atgacaggccaccaagcattgattaaccaagtcctcttctcgccagacacacggataata
gccagtgcttcctttgacaagtccataaagctctgggatggtaggacaggaaagtacctg
acatcgctgcggggccacgtctcagctgtgtaccagatctcctggtcggccgacagccgc
ttgctggtgagcggcagcagtgacagcacgctgaaggtctgggatgccaagacaaagaaa
ctggccattgatctgcctggccatgcagatgaggtgtatgcgacagattggagcccggat
ggccagagggtagcaagcggagggaaggacaagtgcctgcggatgtaa

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