Dryobates pubescens (Downy woodpecker): 104302729
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Entry
104302729 CDS
T08526
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104302729 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dpub04040
]
104302729 (TRPV1)
Ion channels [BR:
dpub04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104302729 (TRPV1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_2
Ion_trans
Ank_3
Ank_5
Ank_4
CNOT1_HEAT
Motif
Other DBs
NCBI-GeneID:
104302729
NCBI-ProteinID:
XP_009901564
LinkDB
All DBs
Position
Unknown
AA seq
843 aa
AA seq
DB search
MSSILGKMRKFGSSDMEESEVTDEYTDGEDSLQETPDSLQGTLSPKVQPPKSNIFARRGR
FVMGDSDKDMAPMDSLYQMDHLMAPSVIKFHANLERGKLHKLLSTDSITGCSEKAFKFYD
RRRIFDAVAQGNTKDLDDLLLYLNRTLKHLTDDEFKEPETGKTCLLKAMLNLHDGKNDTI
PLLLDIARKTGTLKEFVNSEYTDNYYKGQTALHIAIERRNMYLVKLLVQNGADVHARACG
EFFRKIKGKPGFYFGELPLSLAACTNQLCIVKFLLENPYQAASIAAEDSMGNMVLHTLVE
IADNTKDNTKFVTKMYNNILILGAKINPMLKLEELTNKKGLTPLTLAAKTGKIGIFAYIL
RREIKDPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEIIAYSSETPNRHEMLL
VEPLNRLLQDKWDRFVKHLFYFNFFVYAMHIIILTAAAYYRPVAKKEKPPFTFGHSTGEY
FRATGEILSVLGGLYFFLRGIQYFVQRRPSFKSLIVDSYSEVLFFLHSLLLLSSVVLYFC
GQELYVASMVFSLALGWANMLYYTRGFQQMGIYSVMIAKMILRDLCRFMFVYLVFLLGFS
TAVVTLIEDDNEGQDTNSSEYARCCPVKRGRTSYNSLYYTCLELFKFTIGMGDLEFTENY
KFKSVFVSLLVLYVILTYILLLNMLIALMGETVSKIAQESKSIWKLQRAITILDIENSYL
NCVRRSFRSGKQVLVGVTPDGQDDYRWCFRVDEVNWSMWNTHLGIINEDPGCSGDLRRNL
SYTIKRGRVSGKNWKTLVPLLRDGSRREETQKVPEEVKLKPILEPYYEPEESETMKESLP
KSV
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccattcttgggaagatgaggaaatttggcagttctgacatggaggaatctgaa
gtgacagatgaatacacggatggggaggactccctgcaggaaacacctgacagcctccag
ggaacactcagccccaaggtgcagccacccaaaagcaacatctttgcgagacgtgggcgg
ttcgtgatgggggacagtgacaaggacatggctcccatggactccctttaccagatggat
catctgatggcaccttctgtcatcaagtttcatgccaatttggagagggggaaacttcac
aagctcctatctacagattccatcacaggctgctcagaaaaagccttcaaattttatgac
cgcagaaggatctttgatgctgtagcccaaggcaacacaaaggacctagatgacctgctg
ctctaccttaacagaaccttgaagcacctcacagatgatgagttcaaagagccagaaact
gggaaaacctgcttactgaaagctatgctgaatctgcatgatggcaaaaatgataccatt
cccctgctgctggatattgcaaggaaaactggaactctgaaagagtttgttaactcagag
tatactgacaactactacaagggccagactgcacttcacattgccattgagagaaggaac
atgtacctggtgaagctcttggtgcagaatggagcagatgttcatgcaagagcctgtggg
gagttcttcaggaaaatcaaaggaaaacctggcttttattttggggagctgcctttgtcc
ctggctgcctgcactaaccagctctgcattgtgaaattcctcctggagaacccctaccag
gcagccagcattgctgctgaggactccatgggcaacatggtcctgcacacactggtggag
attgcagataatactaaggataacaccaagtttgttaccaagatgtacaataacatattg
atccttggtgccaaaattaatccaatgctgaagctagaagaactcaccaacaagaaaggg
ctgactccattaactctggcagccaaaacggggaagatagggattttcgcttacatcctc
agacgagagatcaaggatcctgagtgcagacacttgtctaggaagttcactgaatgggcc
tatggacctgtccactcctctctgtatgacctctcctgtatagacacatgtgagaaaaat
tcagtgcttgagattattgcctacagcagtgaaacaccaaaccgtcatgagatgctgctg
gtggaacccctgaacaggctgctgcaagacaagtgggaccggtttgtcaaacacttattt
tacttcaacttctttgtctatgccatgcatatcatcatcctcactgcagctgcttactac
agacctgtagcaaagaaggaaaagcctcccttcacgtttggtcacagcactggggagtat
tttcgagcaactggagagatcctgagtgtacttggaggtctctatttctttctcagaggg
atacagtattttgtgcagagacgcccatcattcaagtcactgatagttgacagctacagt
gaagttcttttctttcttcactccttgctcctcctgagctctgtggtgctgtatttctgt
ggccaggaactgtatgtggcttccatggtcttctccttggcgctgggctgggctaacatg
ctctactacacccgtggcttccagcagatgggcatttactctgtcatgattgccaagatg
atccttagagatttatgtcgcttcatgtttgtctatctagtattcctcttgggattttct
acagctgtggtgactttaattgaagatgacaacgaggggcaagacacaaacagctccgaa
tatgctcgatgctgccccgtgaagcgaggccgcacgtcctacaacagtctgtattatacc
tgcctggagctgttcaagttcaccattgggatgggggacctggagttcacagagaactac
aagttcaagtctgtgtttgtcagccttttggttctttatgtcatccttacttacatcctc
ctgctcaacatgctcattgcactgatgggggaaactgtgagcaaaattgcacaggagagc
aagagcatctggaaactccagagagccatcacaatcctggatattgagaacagctacttg
aactgcgtgaggcgctccttccggtctgggaagcaagtcttggtgggggtaacacctgat
ggccaggatgattacagatggtgctttagggttgatgaagtgaactggtccatgtggaat
actcatctgggcataatcaatgaagaccctggctgctcgggggacctcagacgaaatctc
agttacacaattaaacgtggtagagtttcagggaaaaattggaaaacattggttccactt
ttaagagatggaagcaggagagaagagacgcaaaaggtaccagaagaagtaaaattaaaa
cctattttggaaccttattatgagccagaagaatccgagacaatgaaggagtcacttcca
aagtcagtctaa
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