Dryobates pubescens (Downy woodpecker): 104302838
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Entry
104302838 CDS
T08526
Symbol
TSR1
Name
(RefSeq) LOW QUALITY PROTEIN: pre-rRNA-processing protein TSR1 homolog
KO
K14799
pre-rRNA-processing protein TSR1
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpub03009
]
104302838 (TSR1)
Ribosome biogenesis [BR:
dpub03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
104302838 (TSR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
Tsr1_G-like
YBL010C_LAA2
Motif
Other DBs
NCBI-GeneID:
104302838
NCBI-ProteinID:
XP_009901691
LinkDB
All DBs
Position
Unknown
AA seq
771 aa
AA seq
DB search
MWAQPRRRLGDLSRGDRRHQALQLRRQRKEAVLAEKRSLGSRDGPPHLVVLVPLHSRAAA
HDTLHLLQSQDAAVVPVAEGKAGDFALLCPRLKQRWRFVTAQAGDLHAVLDLAKVADSLL
FVLDPTDGWDSAGDYCLSCLFAQGLPSYALAVPGGNDLPPKKRIDARKKLAKAIEKRFPE
AKLFPLNTEQESSLLLRHLATQKQRHLAFRDRRAHLLAYAAEFVPGQESDLVGTLKVSGF
VRGQTLSVNSLVHIVGHGDFQMSQVDAPPDPLSLNPRVVKGQKKSEHMEIQDDSANGTDE
MEQDTKVLMKADPKKQESLQSEVVPDPMEGEQTWPTEEELQEAEASLKTNRRVVKVPKGT
SKYQAAWIVDDGEEGSEKDDDDDYDDEDDDMMEEAVSQEGESSEEEGEPAEEDCETMTIP
ESLRDDQYDEKVEEDEQMLERYKQERMDEMFPDEVDTPRDVPARVRFQKYRGLKSFRTSP
WDPKENLPRDYARIFQFQDFARTRKNLFRQIEKEETEGASVGWYVTVHVCNVPVSVMESF
KEGKPLVLFSLLPHEQKMSVLNFLVHRHPSNCEPVRAKEELIFHCGFRRFRASPLFSQHT
SADKHKLERFLRPDAAVVVTVYAPITFPPASVLLFKQRGNGMHDXXXXXXXXDRIVIKRL
VLSGHPFKIFTRTAVVRYMFFNREDVMWFKPVELRTKWGRRGHIKEPLGTHGHMKCHFDG
QLKSQDTVLLIFLLNLYKRIFPKWTYDPHVPEPVPWVRSESALPVQEVEMD
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcccagccacgacgcaggctcggcgacctcagcagaggggaccggcggcaccag
gcgctgcagcttcgccgacagcgcaaggaggcggtgctggcagagaagcggagtttgggc
agcagggatggtccaccgcacctcgtggttctggtgccactgcacagcagggctgcagcc
cacgacacccttcacttgctgcagagccaggacgcagcagttgtccctgtggctgagggg
aaagctggtgactttgcactcctctgcccccgcctgaagcagcgctggcgctttgtgaca
gcacaggcaggggaccttcatgctgtcttagaccttgcaaaggttgccgactccctcctg
tttgtcctggatcctacagatggctgggacagtgctggggattactgtctctcctgcctc
tttgcacagggcctccccagttatgctcttgctgtcccaggaggcaatgacttgccacct
aagaagcggatagacgccaggaagaaacttgccaaagccatcgagaagcgattccccgag
gccaagctgttccccctgaacacggagcaggagtcctcgctgctgctgaggcacctggcc
acccagaagcagcggcacctggctttccgggacaggagggctcacctgctcgcctacgct
gccgagtttgtgcccggccaggagagtgacctggttgggaccttgaaggtgtctggcttt
gtccggggacagaccctcagtgtgaacagcctggtgcatattgtgggacatggagacttc
caaatgagccaggtggatgctccccctgatcctctctctttgaaccctcgagtggttaaa
ggacagaagaagagtgagcacatggagatccaggatgactctgcaaatggcactgatgag
atggagcaagatactaaggtcctgatgaaggcagatccaaagaagcaggagtctctgcag
tcagaagtggttcctgatcctatggaaggggagcagacgtggcctactgaagaagaactg
caagaagcagaggcttctctgaagacaaacaggagggtggtgaaggtcccaaaaggcaca
tccaagtaccaggctgcctggattgtggatgatggagaagaaggcagtgagaaagatgat
gatgatgattatgatgatgaagatgatgatatgatggaagaggcagtttcccaggaagga
gaaagcagtgaggaggaaggggaacctgcagaggaggactgcgaaactatgaccattccc
gagagcctgcgggatgaccagtatgatgagaaggtggaggaagatgaacagatgctggag
agatacaaacaggagagaatggatgaaatgtttccagatgaggtggacacaccacgggat
gtacctgccagagtccggttccagaagtacagggggctgaagagcttccggacttctcca
tgggatcccaaagagaatctcccaagggattatgccaggattttccagttccaggacttt
gcccgaaccagaaagaacctcttccggcaaatagagaaagaggagactgaaggagcctcg
gttggctggtatgttacagttcatgtctgcaatgtccctgtctcagtgatggagagtttc
aaagaaggaaagcccctagtcctgttctcgctgcttccccatgaacaaaagatgtcagtg
ctgaatttcctggtgcatcggcacccaagcaactgtgagccggtgagggccaaggaggag
ctgatctttcactgtggcttcaggcgcttccgagcgtcccccctcttctcccagcacacc
tcagctgataagcacaagctggagcgtttcctgcgcccggatgctgctgtggtggtgact
gtttatgctcccatcaccttccctcctgcctcagtgctgctttttaaacagagaggcaat
gggatgcatgacnnnnnnnnnnnnnnnnnnnnnnncgacagaatcgtcatcaagcggctg
gtgctcagcggccaccctttcaagatctttaccaggacggccgtggtgcgatacatgttc
ttcaacagagaggatgtgatgtggtttaagccagtggagctgaggacaaagtggggtcgc
agaggacacatcaaagagcccttaggtacccatggtcacatgaagtgtcactttgatggg
cagctgaagtcccaggacacggtgctgctgatttttttgctgaacctctacaagcgcatt
tttcctaaatggacttatgacccccatgttcctgagcctgtgccctgggtgaggagtgag
agtgcactgccagtacaggaggtggaaatggattaa
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