Dryobates pubescens (Downy woodpecker): 104302888
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Entry
104302888 CDS
T08526
Symbol
CMTR1
Name
(RefSeq) cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1
KO
K14589
cap1 methyltransferase [EC:
2.1.1.57
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpub03019
]
104302888 (CMTR1)
Enzymes [BR:
dpub01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.57 methyltransferase cap1
104302888 (CMTR1)
Messenger RNA biogenesis [BR:
dpub03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
104302888 (CMTR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FtsJ
G-patch
WW
mRNA_cap_enzyme
DNA_ligase_A_M
G-patch_2
Motif
Other DBs
NCBI-GeneID:
104302888
NCBI-ProteinID:
XP_009901743
LinkDB
All DBs
Position
Unknown
AA seq
864 aa
AA seq
DB search
MKRRTEPEFSSPQKKQKKRIEDLGLTLSSTSDDETQFSNHTTQESSSSSSGSDSETDEKR
PVFSNEFKQDSLVEGTSSRYSMYNSVSQKLMAKMGFREGEGLGKYGQGRKDIVEASNQKG
RRGFGLTLKGFDGELNIDWQDEPEPSAYEEVDWCLKCTTEIPDAQELKEWMTVGKRKMVI
EDETEFCSEELLRSVLQCKSVFDELDGEEMRRARTRSNPYEMIRGAFFLNRAAMKMANMD
HVFDYMFTNPKDFHGNPLIKEREAELLYFADVCAGPGGFSEYVLWRRKWHAKGFGMTLKG
PNDFKLEDFYSASSELFEPYYGEGGIDGDGDITRPENITAFRNFVLDNTDQKGVHFLMAD
GGFSVEGQENLQEILSKQLMLCQFLTALSIVRTGGHFVCKTFDLFTPFSVGLVYLLYCCF
ERVCIFKPVTSRPANSERYVICKGLKLGIDDVRDYLFTVNIRLNQLRNSDVDVNLVVPLN
VIKGDQDFCDYIVRSNENHCKVQIKALAKIRAFVQDTTLIEPRQAEIRKECLQLWGIPDQ
ARVAPSSSDPKSKFFELIQGMDIDTFSYKPTPLNSTTLEKIRHVLDYRCMVSGSEQKFLL
GMGLGKSQIYTWDGRQSDRWTKLDLKTELPRDTLLSVEIVHELKGEGKAQRKISAIHILD
VLVLNGNDVQKQHFNQRIRLAEKFVKAVSKPSRPDMNPIRVKEVYRLEEMEKIFVRLEMK
VIKSSRGIPRLSYTGRDDRHFVPTGLYIVRTLNDPWTMACSKNTNKKFFFNKATSQATYD
LPFEAITPFHMCHYSRLFWEWGEGVRVHDSQKRQDPEKLSKEDVLSFIQAHTPKPALLRS
AGGTEPSLDSSGTDETGGAPQLQS
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaaggacagaacctgaatttagcagcccccaaaagaagcagaagaagaggata
gaagacttgggattaaccctcagttctacttcagatgatgaaactcaatttagtaatcat
actactcaagagtcttccagtagcagcagtggatctgacagcgagactgatgaaaaaaga
ccagtcttcagcaatgaattcaaacaagattcccttgtggagggtacttcatctcgctat
tcaatgtataacagtgtctcccaaaagctcatggccaagatgggcttccgggaaggagaa
ggtctgggaaaatatggccaaggcaggaaggatattgttgaggcctccaatcagaagggg
aggagaggctttgggctgacgctcaaaggattcgatggggagctcaacattgactggcaa
gatgagcctgagcccagtgcctatgaggaggtggactggtgcctcaagtgtaccacagaa
atccctgatgcccaggagctcaaggagtggatgactgtggggaagaggaagatggtgatt
gaagatgaaacggagttctgtagtgaagagcttttacgtagtgtcctgcagtgcaagagt
gtatttgatgagctagatggagaagaaatgcgtcgagcccgaacaaggtcaaacccttat
gagatgatccgtggagctttcttcctgaacagggctgcaatgaagatggcaaatatggac
catgtctttgactatatgtttacaaaccccaaggacttccatgggaacccgctgataaag
gagcgggaggcagagctgctctactttgctgatgtgtgtgctggtcctggaggcttctct
gagtatgtcttgtggaggcggaagtggcatgccaaaggatttggcatgaccttgaaagga
ccaaatgattttaaactggaagacttctactctgcttccagtgagctttttgagccttac
tatggagagggagggattgatggagatggagacatcactcgtccagagaacattactgct
ttccggaattttgttttggacaatactgatcagaagggagtgcatttcttaatggctgat
gggggtttctcagtggagggtcaggagaatctgcaagaaatcctaagcaagcagctgatg
ctttgccagtttcttacagcactgtccattgtccggacaggaggacattttgtctgcaaa
acctttgacctgttcactccattcagtgtgggactcgtttatctgctgtattgctgcttt
gagcgagtgtgcatctttaaacctgtgacgagccgccctgctaactctgagaggtatgtg
atatgcaaaggactaaagctggggattgatgacgtgcgggactacctcttcacggtgaac
atcagactcaaccagctgcgcaactcggacgtggatgtgaacctggttgtccccttgaac
gtgatcaaaggcgaccaggatttctgtgattacatcgtccgctccaacgagaaccactgc
aaggttcaaataaaggcacttgccaaaattcgtgcgtttgttcaggacacgacactgatt
gagccacggcaggctgaaatccgaaaggagtgcctccagctatgggggattcctgatcag
gctcgtgttgctccttcatcttcagatccaaagtccaaattctttgagctgatccagggc
atggacatcgataccttcagttacaaacccactccgctgaattccactacgctggagaaa
atccgccacgtgttagattaccggtgcatggtgtctggaagtgagcagaaattcctcttg
ggaatggggttaggtaaatcacagatctacacctgggatggtcgccagtcagatcgctgg
acaaagctggatttgaaaactgagctgccacgggatacccttctctctgtggagattgtt
catgagttgaaaggagaggggaaagctcagcgaaaaatcagtgccatccacatccttgat
gtcttggtgctgaatggcaatgacgttcaaaagcagcatttcaaccagaggattcggctg
gcagagaagttcgtcaaagctgtttctaaacctagccggccagacatgaaccccatccga
gtgaaggaagtgtacagattggaggaaatggagaagatttttgtgaggttggagatgaaa
gtcattaagagctcacgagggataccccggctgtcctacactggccgagatgaccggcac
tttgtgcccacagggctctacatcgtgcggactctgaacgatccttggacaatggcatgc
agcaaaaacaccaacaagaaattcttcttcaacaaagcgaccagtcaagcaacctatgac
ctcccttttgaagccatcacaccctttcacatgtgccattacagccgcctcttctgggag
tggggggaaggtgtcagagtgcacgactctcagaaaaggcaagacccggagaagctatcg
aaggaggatgtcctgtctttcatccaggcacatacccctaagcctgctctcttgaggagt
gcagggggaacagagcccagcttggactcatcggggactgatgagactgggggggctcca
cagcttcaatcctaa
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integrated database retrieval system
