Dryobates pubescens (Downy woodpecker): 104302982
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Entry
104302982 CDS
T08526
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03030
DNA replication
dpub03410
Base excision repair
dpub03420
Nucleotide excision repair
dpub03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104302982 (RFC4)
03410 Base excision repair
104302982 (RFC4)
03420 Nucleotide excision repair
104302982 (RFC4)
03430 Mismatch repair
104302982 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpub03032
]
104302982 (RFC4)
03036 Chromosome and associated proteins [BR:
dpub03036
]
104302982 (RFC4)
03400 DNA repair and recombination proteins [BR:
dpub03400
]
104302982 (RFC4)
DNA replication proteins [BR:
dpub03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104302982 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
104302982 (RFC4)
Chromosome and associated proteins [BR:
dpub03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
104302982 (RFC4)
DNA repair and recombination proteins [BR:
dpub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104302982 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
104302982 (RFC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_assoc_2
Rad17
AAA_30
AAA_16
AAA_22
AAA_11
DUF815
SLFN-g3_helicase
Mg_chelatase
AAA_24
AAA_14
RuvB_N
AAA_19
AAA_28
TIP49_C
AAA_5
DNAX_ATPase_lid
AAA_7
bpMoxR
ResIII
AAA_3
Motif
Other DBs
NCBI-GeneID:
104302982
NCBI-ProteinID:
XP_009901851
LinkDB
All DBs
Position
Unknown
AA seq
365 aa
AA seq
DB search
MQAFLKGPSAISTKPPAAKEKGPAGSAGSSGESKRLKPIPWVEKYRPKNVDEVAFQDEVV
AVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELYGPELFRQRVLELNASDERGIQVI
REKVKAFAQLTASGSRSDGKMCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLI
CNYISRIIEPLTSRCSKFRFKPLSDKIQQQRLLDVAEKEHVKISSEAVSYLVKVSEGDLR
KAITFLQSATRLMGGKEITEKIVTEIAGVIPKETIDELLSVCGSGSFEKLETLAKDLINE
GYAVAQLVNQLHDAVVESEDYSDKQKSVIVEKLAEVDKCLADGADEYLQLVSLCALVMQQ
LTQNT
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccttcctcaaaggcccgtctgccatcagcaccaagcctcctgctgccaaagag
aaaggcccggcaggctcagctgggagcagcggggagagcaagaggctcaaacccatcccc
tgggtggaaaaataccgccccaaaaacgtggatgaagttgctttccaggatgaagttgtt
gctgtgctgaaaaagtccttggaaggtgctgatcttcccaatctgttgttctatggccca
cctggaactggaaaaacttccactattttagcagctgctagagaactctatgggcctgaa
ttattccggcaaagagtccttgaattaaatgcttctgatgagcgtggaatacaagtgatt
agggaaaaagtgaaggcttttgctcagctaactgcatctggaagccgctcagacggtaaa
atgtgtcctccttttaaaattgtgatactggatgaagcagactcgatgacttcagcagcc
caggcagccttaagacgcacaatggaaaaagaatctaagacaacacgtttctgccttatt
tgtaactacatcagcagaataattgaacctttaacatctcgatgctccaaattccgcttc
aagcctttgtcggacaaaatccaacagcagaggctattggacgttgctgagaaggaacat
gtgaagattagtagtgaggcagtgtcataccttgttaaggtgtcagagggggacttaagg
aaagcaattacttttcttcaaagtgccactcgcctaatgggtgggaaagagatcacagag
aaaatagtcactgaaattgctggggtcatccctaaagaaacaattgatgaactgctgtct
gtctgtgggagtggttcatttgagaagctggaaacgctggcaaaggatctcataaatgaa
ggatatgctgttgctcagcttgtgaaccagctgcatgatgctgttgttgagagtgaagat
tacagcgacaagcagaaatccgttatagtcgagaagcttgcagaagtagacaaatgcttg
gcagatggtgctgatgagtacttgcagttggtgagtctctgtgcccttgtgatgcagcag
ctaacacaaaacacttaa
DBGET
integrated database retrieval system