Dryobates pubescens (Downy woodpecker): 104302990
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Entry
104302990 CDS
T08526
Symbol
USP13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dpub01002
]
104302990 (USP13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpub04121
]
104302990 (USP13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dpub04147
]
104302990 (USP13)
Enzymes [BR:
dpub01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104302990 (USP13)
Peptidases and inhibitors [BR:
dpub01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104302990 (USP13)
Ubiquitin system [BR:
dpub04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104302990 (USP13)
Exosome [BR:
dpub04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104302990 (USP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UBA_7
UBA
zf-UBP
UCH_1
zf-UBP_var
UBA_4
UBA_9
Motif
Other DBs
NCBI-GeneID:
104302990
NCBI-ProteinID:
XP_009901863
LinkDB
All DBs
Position
Unknown
AA seq
800 aa
AA seq
DB search
MNTFLGFGREHIERHYRKTGQCVYLHLKRHVIEVPGASGGALPKRRNAKLFLDLETNSDL
NSDDFEYEDEAKLVIFPDHLEISLPNIEELPALVTIACDAFLSAKSPYRKQDPDSWEEEL
QASKHAKTLVQLDNGVRIPPSGWKCSKCDLRENLWLNLTDGSVLCGKWFFDGSGGNGHAM
EHYKETGYPLAVKLGTITPDGADVYSFDEEEPVLDPHIAKHLAHFGIDMLQMQVTENGLR
DNDIKPRISEWEVIQEAGVKLKPMYGPGYTGMKNLGNSCYLNAVMQAIFSIPEFQRAYVG
NLPRIFDYSPLDPTQDFNTQMAKLGHGLLSGQYSKPPMKSELIEQVMKEEHKPQHNGISP
RMFKAFISKDHPEFSSNRQQDAQEFFLHLINLVERNPVGSENPSDVFRFLVEERTQCCQS
RKVRYTERVDYIMQLPVAMEAATNKDELIAYELKRREAEAAGRPPPELVRAKIPFSACLQ
AFSEPSNVEDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWIPKKLDVSVDMP
DFLDISHLRARGLQPGEEELPDIAPPIIIPDDPKDRMTNHFVEALDIDDSSVMQLAEMGF
PLEACRKAVYYTGNLGAEVAFNWIIAHMEEPDFAEPLVIPAFGEVASSGAAAFGDVGLDN
QPPEETVAIIISMGFHRNLAIQALKATNNNLERALEWIFSHPELEEESEPALDMVDMENN
ANANILAETGPEGPRIKDGSGRYELFGFISHMGTSTMSGHYVCHLKKEGRWVIYNDLRVC
ASERPPKDLGYIYFYHRIPS
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgaacacatttctgggatttggaagggaacacattgaaaggcattaccggaagacagga
cagtgtgtgtacttgcatctgaaacgacatgtcatagaggtaccaggggcatctggtgga
gctttaccaaaaaggaggaatgctaagctatttttagatctagagacaaacagtgatctc
aacagtgatgactttgaatatgaagacgaagcaaaactcgttatatttcctgatcacctt
gaaatctcattacccaatatagaagagttaccagcactggtgacgatagcttgtgatgca
ttcctcagtgccaaatcgccctacaggaagcaggaccctgactcctgggaagaagagctg
caggcatccaaacatgccaaaacacttgtccagttagacaacggtgttagaattcccccc
agcggttggaaatgctcaaaatgtgacctgcgggagaatctgtggctaaacctgacagat
ggttctgtgctgtgtggaaagtggttttttgatggcagtggggggaatgggcatgcaatg
gagcactacaaggagacagggtatcccctagcagtgaagttgggaaccatcactcctgat
ggagcagatgtctattcctttgatgaagaggaaccggttttagatccgcatatagcaaag
catttggcacactttggaatcgatatgctgcagatgcaagtgacagagaatgggctcaga
gataatgatataaaaccaagaatctctgaatgggaagtgattcaggaagctggagtgaaa
ctcaagcccatgtatggcccaggatacactggcatgaagaacctgggaaatagctgctac
ctcaatgctgtcatgcaagccattttcagcatcccagagttccaaagagcgtatgtggga
aaccttccacgaatatttgactactctcctcttgatccaacacaagatttcaacactcag
atggctaaattgggacatggcctcctttcaggccaatactctaagccacccatgaaatct
gagcttattgaacaggtgatgaaagaagaacacaagcctcaacacaatggaatctctccc
cgaatgtttaaagcttttataagtaaagaccacccagaattttcttctaatagacaacaa
gatgcacaggagtttttcctacatcttataaatctagtggagaggaatcctgtaggttca
gaaaatcctagtgacgttttccggttcctggtggaagaacgcacacaatgttgccagtcc
agaaaggtccgctacacagagagggtagactacatcatgcagttacctgttgccatggaa
gcagcaactaacaaagatgaattaattgcctatgaattgaagaggagagaagcagaagct
gcaggaagacctccaccagagcttgtccgtgccaagatcccatttagtgcatgtctgcag
gccttttcggaacccagcaatgtagaggatttctggagcagtgcccttcaagcaaaatct
gcaggagttaagacttctcgtttcgcttcgtttcctgagtacttagtggtgcaaataaag
aaattcacctttggccttgactggatccccaaaaagcttgatgtttctgtagacatgcca
gatttcctagacatcagccaccttcgggccaggggcctccagccaggagaagaggaactt
ccagacattgctcctcccattatcattcctgatgacccaaaagatcgtatgacaaaccat
tttgtggaggctctagatattgatgactcttcagttatgcagctggcagagatgggtttc
cctttggaagcgtgtcggaaagctgtctactatacaggcaacttgggtgctgaagtcgct
ttcaactggatcattgcacacatggaagaaccagattttgctgagccactggtcattcca
gcatttggagaagttgcttccagtggagcagctgcatttggagatgttgggctagataac
caacctcctgaagagactgttgcaattatcatttccatgggcttccacagaaatctagca
attcaagccctgaaagcaacaaacaataatttggagcgtgcgctggaatggatcttcagc
caccctgaactcgaggaggaaagtgagcctgctttggacatggtggatatggagaacaat
gctaatgccaacatccttgcagagacagggccagagggacccaggatcaaagacgggtct
ggaagatatgagctgtttggattcatcagccacatgggaacatccacaatgagtggccac
tatgtttgtcatctcaaaaaagaagggagatgggtgatctacaatgaccttagagtctgt
gcctcagaacgacctcccaaagaccttggctacatttatttttaccacaggataccaagt
tag
DBGET
integrated database retrieval system
