Dryobates pubescens (Downy woodpecker): 104303083
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Entry
104303083 CDS
T08526
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104303083 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dpub01009
]
104303083 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpub04131
]
104303083 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
dpub03029
]
104303083 (RB1CC1)
Protein phosphatases and associated proteins [BR:
dpub01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104303083 (RB1CC1)
Membrane trafficking [BR:
dpub04131
]
Autophagy
Autophagosome formation proteins
ULK complex
104303083 (RB1CC1)
Mitochondrial biogenesis [BR:
dpub03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
104303083 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
104303083
NCBI-ProteinID:
XP_009901966
LinkDB
All DBs
Position
Unknown
AA seq
1596 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKHAIQTKYKIAIQHQVLVVNGGECMAPDRRVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTYSYQKLLFKFENVYSSYLQ
SIEDIKLKLTHLGSAVSIMAKIPLLECLTRHSYKECLGRVDSSADHGGTESDETEDGKSA
ELVLYPDISKVNNKSMLASFCKSVEHSTLEGTDPEGVKDDKESGQNAAVQDNETSVELRD
DDQPSFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIQPFLAECRQTIAKLDNQN
MKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHAN
QLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTE
LLERVKVVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALIKDGKHLYEAEKAKRESF
GKLFRKSFLRNRLFRGLDSWPPSFCTRKPRRFDSELPDISLSDLQFLQSFCPSEVQPLLR
VPILCDFEPLHQHVHALHNLVKAAQSLDEMSQTITDLLNEQKASNSQASPQSATTPRIES
ATGAAIATSSRTPPPSLSLQGPLCPPVCPPAPLEELSPDSIDAHTFDFETIAHPNLEQAL
KQGSLDLDSLAESPESDFMSAVNEFVIEENPVSPTVISDPQSPEMMVESLYSSVINAIDS
RRMQDTTSCVKDVTVENASLSVCMEKCKVIAQDSKVHLRGIKEDLCHFRTLVQREQCDFS
NSLKCTSLEIVNTIENVKLSLEKTLKDKHQKELQSLKSEYETKINKLLEDGEENKNKIQK
LKGDLLGLEEVLQNKNDEFAMVQNEKEAVVCLQNEKDQKLLELECQMETRNSEIKELRQS
RETVLEDMKKLHVENNEKLRLLRAELESLEQSHLKELETELQARHLQEFEKMLAEHKDCL
DKLKKENQHRLEQMQESHTVVVQEKQQQVEELQLKVSDLSDLRCKLEVELALKEAETDEM
KLLLEESRNQQQETLKSQIDKETESLKKEIDKLNSKIQISSDEYQVGLSELRTLMTMEKD
QCISELIDRYEEESNLLRTELNKVTLLHQKTSEAEKRLSEQITELQSKLELETSALEKEK
TEKLSLCEQREKYEAIIHKLKEEKELLVSNQEQDRQLLIQKLNCEKEDAVQNACKEFELQ
REAAEKGLLEKIQQLEMQVNRSPPIESSAESSLVAELQEKLQEEKMKFLEQLEEQEKRKN
EEMQNIRTSLTAEQQTNFNTVLAREKMKKENIINDLSDKLKVLTQQQEKDKDLIETLSED
RARLLEEKKKLEEEVTKLRSSSFSPSTYLAAASEPCGACAADIPTDTDRLVSDIAAEGRM
DSTMETSMMAVHENVHMSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEK
IAIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPASGASRRPWVLGK
VMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4791 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtatgtatttctggtcaacactggaactaccctcacctttgatacagaactt
gctgtacaaaatgtggctgatctgaaacatgcaattcaaacaaaatacaagattgccatt
cagcaccaagtactggttgtcaatggaggagagtgtatggcaccagacagaagagtgtgt
agttacagtgctggaacagataccaacccaatttttttattcaacaaagaaatgatcttg
tgtgaacgtccaccagccatccccaaaaccacattttcagcagagaatgagatggaactg
aaagtagaagaatccctcatgatgcctgcagtgtttcatacagtagcatcacgaacacaa
cttgctgtggagatgtatgaggttgccaagaaactttgctccttttgtgaaggtcttgta
catgatgaacatcttcagcatcaaggctgggctgccataatggccaacttggaagattgt
acatattcttaccaaaagctacttttcaagtttgaaaatgtatattcaagctatttgcag
tccatagaagatatcaagttgaaacttacacacttgggttctgctgtttctatcatggcc
aagataccactgctggagtgcctcacgagacacagttacaaggagtgtttgggaagagtg
gattcttcagctgaccatggagggacagaaagtgatgaaactgaggatgggaaatctgct
gaattggtgctttatcctgatatatcaaaagtgaacaataaatcaatgttagcctcattt
tgcaagtcagttgaacattcaaccttggaaggcacagatcctgaaggagtgaaagatgat
aaggagtctggtcaaaatgctgctgtgcaggacaatgagacatcagtagaactgagagat
gatgatcagccttccttcaatgtgtctttgttagactggataaatgttcaagatagacct
aatgatgttgaatcactggtcagaaaatgttttgattctatgagcaggcttgatccaagg
attatccagccctttctggcagaatgtcgccaaactatcgccaaactagataatcagaac
atgaaggctattaaaggtcttgaggacaggctctatgcattggaccagatgatagcaagc
tgcagcagactggtgaatgaacaaaaggaacttgctcagggatttttggctaatcagaag
agagctgagaacttgaaagatccttctgtgctgcctgatttgtgtttgagtcatgcaaat
cagctgatgattatgttaactaatcacagaaaactgttagatattaaacagaaatgtacc
actgccaaacaggagcttgcaaataatctacaagtcaggctgaagtggtgttgttttgta
atgctgcatgctgaccaagatggagagaagctacaagcattgcttcgtcttgtaacagag
ctcctagaaagggtcaaggttgtggaagctctcagtactgttcctcagatgtactgtcta
gcagttgttgaggttgtgaggagaaaaatgttcataaaacactacagggagtgggcaggt
gctttaataaaagatgggaaacacctttatgaagctgaaaaggcaaaaagggaatctttt
ggtaaactgttcaggaaatcttttctaaggaatcgtctgtttagaggacttgactcctgg
cctccatccttttgtacacgaaaacctcgccgatttgacagtgagcttccagatatctca
ttaagtgacttgcaatttttgcagtctttttgtccttcagaagtacagccattactcagg
gttcccatactttgtgattttgaacctcttcaccagcatgtacatgctctacataacctg
gtaaaggcagcacagagtttggatgaaatgtcacaaaccattacagacctgctgaatgaa
caaaaggcctccaatagccaagcatcgccacaatctgctaccacaccaaggattgaaagt
gcaacaggagccgcaattgctacctcttcaagaactcctcctccatcactcagtcttcag
ggtcccctgtgtcctcctgtgtgtcccccagctcctttagaagaattgtctccagacagc
attgacgctcacacgtttgattttgaaactattgcccatccgaacttggagcaagctctt
aagcaaggatcgttagacttggattcattagcagaaagtccagaatctgactttatgtca
gcagtaaatgaatttgtaatagaagaaaatccagtatctcctactgtaataagtgatcca
caaagtccagaaatgatggtggaatctctttactcttcagttatcaatgcaatagacagt
agacgtatgcaagatacaacttcttgtgtaaaggacgttacagtagaaaatgcctctctc
agtgtgtgcatggagaagtgcaaggttattgcccaggactcaaaggtacatttgagaggt
ataaaagaagatctttgccactttagaacacttgtacaaagagaacagtgtgacttttct
aattctttaaaatgcacttcgctggaaatagtaaatactattgagaacgtcaaactgtcc
cttgaaaaaacactaaaagataaacatcaaaaagaattgcagtctttgaaaagtgaatat
gaaactaaaattaataaactgttggaggatggtgaagagaacaagaataagattcagaag
ttaaaaggtgacttgctcggccttgaagaagtccttcagaataagaacgatgaatttgca
atggtgcaaaacgagaaggaagctgtagtttgccttcagaatgaaaaagaccagaagttg
cttgaattggaatgccaaatggaaacacgaaatagtgagattaaggaactgaggcagtca
cgtgaaacagtccttgaagacatgaaaaagcttcacgttgaaaacaatgaaaaactgcga
ctcctgcgggcggaactcgagagtttagagcaaagccatttgaaagagctggaaaccgaa
ctccaggccaggcatttgcaggaatttgagaagatgttggctgagcacaaggactgttta
gataaattgaaaaaagagaatcagcacaggcttgaacaaatgcaggaatctcacacggta
gttgtgcaagagaaacagcaacaagtggaagagttacagctcaaggtttcagatctgtcc
gatctgaggtgcaaattagaagtcgaacttgccctgaaagaggcagaaactgatgaaatg
aagctgcttctggaagaaagcagaaaccagcagcaagagaccttaaaatctcagattgat
aaggaaacagaaagcttaaaaaaggagatagataaattaaacagtaaaatacaaattagc
agtgatgagtatcaagtgggcttgtcggagctaaggactctgatgacgatggagaaagac
cagtgcatttctgagctaatagacagatacgaagaagaatcaaatttgcttagaactgag
ctaaacaaagtaacacttcttcatcaaaaaacttctgaggcagaaaagagactttcagag
caaataactgagctgcaaagtaagttagaattggaaacgagtgccctagaaaaggaaaaa
acagagaagctgtctctctgtgagcagcgggaaaaatacgaagctattatccataagctt
aaggaagagaaagaactgttagtatctaaccaagaacaggacaggcagttgctcattcag
aagctcaattgtgaaaaagaggatgcagtgcaaaatgcttgtaaagagtttgaattacag
agggaagctgctgaaaaggggcttttggaaaaaatacagcaacttgagatgcaagtaaat
cggagtcctcccattgaatcatctgctgaatcaagcttggttgctgaacttcaagagaag
cttcaggaagaaaaaatgaagttcttagagcaacttgaagagcaagagaaaagaaagaat
gaagaaatgcagaacatcagaacatcactcacagcagaacagcagaccaactttaatact
gttctggcaagagagaaaatgaagaaagaaaacataattaatgatctgagtgacaaatta
aaagtgcttacacagcagcaagaaaaagataaggatttgattgaaacactttctgaagat
cgagctcgcttacttgaggagaagaagaaacttgaggaagaagttactaaattgagaagc
agtagtttttctccttcaacctacttagcagcagcttcagaaccttgtggagcctgcgca
gctgatattcccactgacacagacagattggtttcagacattgcagctgaagggaggatg
gactccacaatggaaaccagcatgatggctgtgcatgaaaatgtccatatgtctgaagag
aaacagaggataatgctgttagaaagaactttgcagttgaaagaagaggaaaataagaga
ttaaatcagagattgatgtctcagagcatgtcatcagtgtcttcaagacattcagaaaaa
atagcaattagagacttccaggtcggagatttggttctcatcatcttggatgagaggcat
gacaactatgtattgtttactgttagtccaaccttgtatttcttgcactcagaatctctt
gctgcactggatctcaaaccagcttcaggtgcatctaggagaccttgggtgctaggaaaa
gtgatggaaaaggaatattgccaggcaaaaaaggcacaaaacagatttaaagttcctttg
ggtacaaaattctacagagtgaaagcagtaccgtggaacaagaaagtataa
DBGET
integrated database retrieval system
