Dryobates pubescens (Downy woodpecker): 104303157
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Entry
104303157 CDS
T08526
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpub03036
]
104303157 (CHD9)
Chromosome and associated proteins [BR:
dpub03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104303157 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Chromo
Helicase_C
ResIII
DEAD
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
104303157
NCBI-ProteinID:
XP_009902056
LinkDB
All DBs
Position
Unknown
AA seq
2851 aa
AA seq
DB search
MTDPMMDFFDDANLFSETLEGLSDDAFVQSGPVSLVDELNLGAEFEPLHIDSLNHVQDAQ
NQQKMSEFDQLNQYDTLKLHSVNQSFNSSADNVLSPHSQFNCSPVHPQNQSNGMFPDVAD
GSPMWGHQTATTVTNQNGSPFHQGHSQSMQQNKSFVAHHDFALFQANEPQHQCASLRSQQ
SRNNTGQDALSQPKDFMEVNVSTSLRVSVNHPPSVSNPSTSQQPLSVQQFSQTASASIHF
CGNQEGNFDGQSPTITPCSVNNSQQFSSPYPYSNNHISPTSLLQSTTALSTSQQTHSISD
FTGSDAFTSQTGTKQETAEHMLNPNTPLNSNSFQMLHSAHPQGNFSSSKLSPVNINFPAS
TGSTSQISHFTDPIESNGFTSLDENLLHQVESHSEPFTGLDPDDLLQEDLLPQFDDSAFV
QDSTSHVLEHDLEHHIAPQQVTQSSDLVRAQSQSQIHPWHSSVSNQRTQDRNHTCREEQP
PPSKKTDGSGSYTKLQNTQVRAMSEKKQKKKADLESKQEKANRIISEAIAKAKERGERNI
PRVMSPENFPSVSAEGKEEKKGRKVKTKPKDKESKKPKTGSSSKIKEKTKIGKLIITLGK
KQKRKNESSDELSDAKQTPQRPLKDEDSQKRRSNRQVKRRKYAEEGEGKQSEEEAKVSVK
IKKNSAPFPAEQPLQLFVENPSEEDAAIVDKILSSRVIKKEISAGMTVETEEFFVKYKNY
SYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRVLEVSL
CEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQLQASRPDSRRLDRPPPN
SWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEIL
LAGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYFRDSQGRII
RGTYRFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVL
LTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLK
EDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKC
CNHPYLIKGAEEKILGEFKETYNPTAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLI
FSQMVRCLDILEDYLIHKRYLYERIDGRVRGKAGGLGINLTAADTCIIFDSDWNPQNDLQ
AQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRENSVGGIQQL
SKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFV
ASGNRTDISLDDPNFWQKWAKKAEIDIDAISGRNSLVIDTPRIRKQTRPFSATKDELAEL
SEVESEGDEKPKLRRPCDRSNGYGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEQD
VEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDGQTRELQNHLGLSAPVPRGRKGKKV
KTQASTFDIHKAEWLRKYNPEHLLQDEGYKKHIKHHCNKVLLRVRMLYYLKQEVIGNEFQ
KVFNGIDASEIDVWVPEPDHSEDPAEWWDVDADKSLLIGVFKHGYEKYNTIRADPALCFL
ERVGKPDDKAVAAEQRANDYMDGDVEDPEYKPAPAMFKDDIEDDASSPGDLVIADGDGQM
MEGDKIYWPTQSALTTRLRRLITAYQRTSKNRQAQQIQPAFPIQTNMMQPPYEEAALNPK
MAAKIERQQRWTRREEADFYRVVSTFGVVFDPERGRFDWTKFRAMARLHKKTDESLEKYL
YAFMSMCRRVCRLPSKEELVDPNIFIQPITEERASRTLYRIELLRKVREQALRHSQLFDR
LKLCQPNPDLPVWWECGTHDRDLLIGAAKHGVSRTDYHILRDPELSFMSAQRNYNQNKVA
LSRTSTPLLHQYQMALCASPLTPQSRLSDAKVNAFEDTKAKNEHLKEDPQSSEEESMSTE
EAPTIMKSEPLSPKNGPPMQNTDHKPSGKTETDRRMVAARTEPLTPNPASKKQRVSKRRS
DSSSDSDSDSDRSSCSSRSSSSSSSSSSSCSRSRSGSSSSSSSSCSSASSSSSSSSSSSS
SSSSSSSEESDSDEEEAQKREGTPHIKAYDEESVASLSTTQDETQDSFQMNNGTPNSSYL
LQGGYMLAASYWPKDRVMINRLDSICQTVLKGKWPSARRSYDSNTVASFYTTKLLDSPGA
AADYSEPSAPTPPLAGVKEEYDQSPQMSKEGGLKLTFQKQGLSQKRPFESEEGVLGQQQY
LARLRELQNASETSLVNFPKSLPKSGTSSHLTTSANGVIVDSQPVVKKRRGRRKNVEGVD
VLFMNRNKQPNHVNLGINSCQAAAGINPALTYTQSQGVLDAESPVPVINLKDGTRLAGDD
APKRKDLERWLKEHPGYVEDSGACIPRMQLHDGRPKQKRHRCRNPNKLDVNSLTGEERVQ
LINRRNARKVGGAFAPPLKDLCRFLKENPEYGVAPEWGEVVKQSGFLPEGMFDRILTGPV
VREEVSRRGRRPKSEIAKATAAAAAATAASVSVNPLLANGLLPGVDLPSLQALQQNLQNL
QSLQVTAGLMGMPAGLTTGGEAKNMAAMFPMLLSGMAGLPNLLGMGGLLTKSTESVSEEK
KGSDSKEADTKKERTEDQNTDTGGENSVSSSPSTSSAAAAANPLSLNPLLLSNILYPGML
LTPGLNLHIPALSQSNIFDVQNSESNDTGSAKPTEEKEEISRVRDQEDKGGTEPSSHNEN
STDEGSEKADASSGSDSTSSSSEDSDSSDED
NT seq
8556 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcctatgatggatttttttgatgatgccaatctttttagtgagaccttagaa
ggtttgtcagatgatgcctttgttcaatctggacctgtttcacttgttgatgaattgaat
ttgggtgcagaatttgaacctttgcacatagactcactgaaccatgtgcaagatgctcaa
aatcagcaaaagatgagtgagtttgatcagctgaatcagtatgatacactgaaacttcac
tcagtaaatcagtcttttaatagctcagctgacaacgtcttgtccccacactctcaattc
aattgctcaccagttcatccgcaaaaccaatctaatggaatgtttccagatgtggctgat
ggtagtcctatgtggggtcatcaaactgccacaactgttacgaatcaaaatgggtccccc
tttcaccaaggacattctcagtctatgcagcaaaacaaaagctttgtagcacaccatgac
tttgccttatttcaggctaatgaaccgcagcatcagtgtgcctcgctacggtcacaacaa
agcagaaacaacacggggcaagatgctctgagtcagccaaaagacttcatggaagttaat
gtatctacttctctcagagtcagtgttaaccacccaccttcggtttctaatccatcaact
tcacagcagcctctgtctgttcaacagttttctcaaactgcaagtgcttcaatacatttt
tgtgggaatcaagaaggaaattttgatggacagtctccaactattactccatgttctgtc
aataatagccaacaattttcatctccttatccttactctaataaccacatttctcctacc
agccttcttcagtctacaacagctctttctactagccagcagacgcactctatctctgac
ttcactggaagtgatgcctttacatctcaaacagggaccaagcaagaaacagctgagcac
atgttgaatcctaatacacccttgaattcaaatagttttcaaatgttgcattctgcacat
cctcagggcaactttagtagttcaaaactctctcctgtgaatattaatttcccagcttct
actggttccacttctcagataagccatttcactgaccctattgaaagcaacggttttacg
tctttagatgagaacttacttcatcaagttgagagtcacagtgaaccgtttacaggactt
gacccagatgaccttcttcaggaagacctcctgccacagtttgatgattctgcatttgtt
caggatagcacaagccatgttttagagcacgatctagaacatcatatagccccacagcaa
gtaacacagtcgtctgatcttgttcgggcacagtctcaaagtcagatccatccttggcat
tcatcagtttctaatcagcgtacgcaagatagaaatcacacatgtcgggaagagcagccc
cctccttctaagaagactgatggttcaggatcatatactaagctgcagaatacccaggtg
agagcaatgtctgaaaagaagcagaagaaaaaagcagacttggaaagtaaacaagagaag
gcaaatcgcataatatctgaagcgattgcaaaagcgaaagagagaggagagagaaacatt
ccccgagtaatgagtcctgaaaacttccccagtgtttcagctgaaggaaaagaggaaaag
aagggtagaaaagttaaaaccaaaccaaaggacaaggagagcaaaaaaccgaaaactggt
tcctcatccaaaattaaagagaaaacaaaaattggaaagctaatcatcacactgggtaag
aagcagaaaagaaaaaatgaatcttcagatgaattgtctgatgctaagcaaactccacag
cggccactgaaagatgaagactcacagaagagaagatcaaatcgtcaagtgaaaaggaga
aaatatgccgaagaaggagaaggaaaacagtcagaagaagaagctaaagtttctgtgaaa
atcaagaagaattctgctccttttcctgctgaacagcctttacagttatttgtggaaaat
ccaagcgaagaagatgcagcaattgtggacaaaatcttatcctccagggtaataaaaaaa
gaaatatctgctgggatgacagtagaaacagaagagttctttgtaaaatacaagaactac
tcttatctccactgtgagtgggccacagaacaacagcttttaaaggataaaagaatccag
cagaaaataaaacggttcaaactaaggcaagcacaaagagctcacttttttgcagatatg
gaagaagaaccttttaatcctgactatgtggaagtagaccgggtattagaagtatctctt
tgtgaagataaggacactggtgagcctgttatttactatttagtaaaatggtgttcgttg
ccatatgaagacagtacgtgggagctgaaagaagatgtagatcaagcaaaaatagaagaa
tttgaacaattgcaagcttccaggcctgactcaaggagattggaccgaccacctccaaac
tcctggaagaagatagaacagtccagggaatataaaaatggcaatcagctcagggaatat
caactggaaggacttaactggcttctgttcaactggtacaatagacgaaattgcatttta
gcagatgaaatgggtcttggcaaaaccattcaatcaattacattcctctatgaaatcctc
ctggctggtataagagggccttttctgatcatagctccactttccactataaccaactgg
gaaagagaatttcgcacatggactgaccttaatgttgtagtgtatcatggaagcatgatc
agcaggcagatgattcagcagtatgaaatgtacttcagggactcccagggacgcatcatt
cgaggtacctacagattccaagccattatcacaacttttgaaatgattcttggtgggtgt
ccagagttaaatgcaattgaatggcgatgcgttattattgatgaagctcacagactgaag
aacaaaaattgcaaactcttggaaggcctgaaattaatgaaccttgagcataaagtgttg
ttaacgggtaccccactgcagaacacagtagaagaattatttagtctgcttcattttctg
gaaccattgcgtttccctgctgaatctacattcatgcaagaatttggagaccttaaaaca
gaggaacaggttcagaaactacaagctatcctgaaacccatgatgctcaggagattaaag
gaagatgtggaaaaaaagctggctcctaaggaggaaactataattgaagtagaactaact
aatattcagaaaaaatattatcgagctattttggagaaaaattttgcttttttatccaaa
ggagcagggcaagcaaatgtacccaatctggttaacaccatgatggaactgagaaagtgc
tgtaaccacccttacctcatcaaaggtgctgaggagaaaatcctgggagagtttaaagaa
acatataacccaactgctcctgacttccatctgcaagcaatgatccagtctgctggtaaa
ttggtccttattgacaaacttcttccaaaaatgaaagcaggaggccacaaggtccttatc
ttctctcaaatggtgcgttgccttgatattttggaggattaccttatacacaaaaggtac
ttatacgaacgaatcgatgggcgagtacgagggaaagctggtggtttgggcattaatttg
actgcagcagatacatgtataatttttgattctgactggaatcctcaaaatgatctgcag
gctcaagcccgttgccacaggattggtcagaacaaagcagtgaaagtctacagactgata
acacgtaactcctatgaaagagagatgtttgacagagcaagtctgaaactgggactggat
aaggctgtcttgcagagtatgagtggaagagaaaacagtgtcggtggtatccaacaactc
tccaaaaaagaaatagaagacttacttcggaggggtgcatatggtgccattatggatgaa
gaagatgaaggctctaaattctgtgaggaagacattgaccagattttgcagcgccgtact
aaaactatcaccattgaatcagaaggaaggggctccacatttgccaaggctagttttgtt
gcatctggaaacaggactgatatttcactagacgatcccaacttctggcaaaaatgggcc
aaaaaagcagaaatagatatagatgctatcagtggtagaaacagcctggttattgatact
ccaagaattaggaaacaaacacggccctttagtgctacaaaagatgagctggctgagttg
tctgaagtggagagtgagggcgatgaaaaacccaaactccgcaggccctgtgaccgttcc
aatggatatggaaggacagagtgctttcgggtggaaaaaaacttgctggtctacgggtgg
ggtcgatggagggagattttgtcccatggtcgcttcaagagacagctgaacgaacaggat
gtggagatcatttgccgagctctgttagcctattgccttgttcactacagaggagatgag
aaaataaaaagtttcatatgggatctcattaccccaacagaagacgggcaaacacgagag
ttacagaatcaccttggcttatcagcccctgtgcctagaggaagaaaagggaaaaaagtg
aagacccaggctagcacctttgatatacacaaagcggaatggcttagaaaatacaatcca
gaacatctgctgcaagatgaaggctacaaaaagcacataaaacaccattgcaacaaggtc
ttgcttcgagtaagaatgctgtattacttaaaacaagaagtcattgggaatgaattccaa
aaggtgtttaatggaattgatgccagtgaaattgatgtttgggtccctgagccagatcac
tctgaagatcctgctgagtggtgggacgtggatgcagataaatcccttctaattggagtt
tttaaacatggttatgaaaaatacaacactatcagagcagacccagcgctgtgcttcttg
gaaagggttggcaagccagatgacaaagcagttgctgctgaacagagagcaaatgattat
atggatggggatgttgaagatccagaatataaaccagcaccagcaatgtttaaagatgac
atagaggatgatgcttcatccccaggtgatctagtaatagcagatggagatggacaaatg
atggaaggagacaaaatctactggcccactcaatctgccttaacaacacgccttcgtcgc
ctcataacagcttatcagcgaacaagtaagaataggcaggcccagcagattcagccagca
ttcccaatacaaaccaacatgatgcagcctccatatgaagaagctgctctaaatccaaag
atggctgctaagattgaaagacagcaaagatggacaagaagggaagaagctgacttctac
agagttgtgtccacatttggagtggtgtttgatcctgaaaggggacgatttgattggacc
aagttcagagcaatggctaggctgcataagaaaacagacgagagcttagagaaatacttg
tatgcatttatgtcaatgtgccggcgagtctgtcggctcccctcgaaagaagaactcgta
gacccaaacatttttatccagcctataacagaggagcgtgcttctcggactctgtaccgc
attgagctcctgaggaaagtacgagaacaggctctcagacactcacagctgttcgatcga
ctaaagctatgccagccaaacccagacttgcctgtctggtgggagtgtgggactcatgac
agggatttacttattggagctgctaaacatggagttagcaggacagattatcatattctt
cgtgatcctgaactctcatttatgtctgcccagaggaattataatcaaaacaaagtggca
ctctcaaggacttctactccgctcttgcatcagtaccagatggcattatgtgcttctcct
cttacacctcaatcaagattatcagatgctaaagtgaatgcttttgaggacacaaaagct
aaaaatgaacatctgaaagaggaccctcagtcttctgaagaggagtctatgtctacagag
gaggcaccaacaataatgaaatctgaacctctgagcccgaaaaatggcccaccaatgcaa
aatacagatcacaaacctagtgggaagactgaaacagacaggcgcatggtggcagcaagg
acagagcctctaactccaaacccagcttcaaaaaaacagagagtcagtaaaagaagatct
gactctagttctgactcagactctgactcagatagatcatcctgttcttccaggtcatct
tcttcatcctcttcatcttcctcgtcttgttcacgctctcgatcaggctctagctcttca
tcatcttcatcttgttcttcagcatcttcctcctcctcctcgtcatcctcctcctcctcg
tcgtcgtcatcatcatcgtctgaagagagtgatagtgatgaagaggaggcacagaaacgt
gaaggaacgccgcatataaaagcatatgatgaagagagtgtagcttctctgagtactaca
caagatgagacgcaagacagtttccagatgaacaatgggacaccaaattccagttatctc
ttacaaggtggatacatgttggctgcatcctactggccaaaggatcgagttatgattaat
cgacttgacagtatttgtcaaacagtgttgaaaggtaaatggccttcagcaagaaggagc
tatgacagcaacacagtggcatctttctacacaaccaagcttctggatagcccaggtgca
gctgcagattacagtgagcccagtgcaccaacaccccctcttgcaggcgttaaagaagaa
tacgaccagtcaccacagatgtcaaaggaaggtggtttgaaattgacttttcagaagcag
gggctgtctcagaaaaggccatttgaaagcgaggaaggtgtattgggacagcagcaatac
ctggctcggctacgtgaactccagaacgcctcagaaaccagccttgttaacttccccaaa
tcacttcccaaatcaggtacttccagtcacttaacaaccagtgccaatggagtcatagtt
gacagtcagcctgtagtcaaaaagagaagaggaagaaggaagaacgtggagggagttgat
gtcctctttatgaacagaaataaacaacctaaccatgttaatctaggtattaactcctgt
caagctgctgcaggaataaacccagccctcacttacacgcagtcccaaggtgtgctagat
gcagagagtccagttcctgttattaacctaaaagatggaacaaggcttgcaggtgatgat
gcccctaaaagaaaagatttagaaaggtggcttaaagaacatcctggatatgttgaagat
tcaggagcttgtattcctaggatgcagctgcatgatgggagacccaaacaaaaaagacac
cgttgtcgaaaccccaataaactggatgttaacagcttgactggtgaagagcgtgtccag
ctcataaatagaagaaatgcaagaaaggttgggggtgcatttgctccccctctgaaggac
ttgtgcaggttcttgaaagaaaatccagagtatggagtggctcctgaatggggagaagtc
gtaaaacagtctggatttcttccagagggtatgtttgaccgtattctcactggacctgtt
gtgcgggaagaagtaagccggagaggaaggcgccccaaaagtgagattgccaaggcaaca
gcagctgcagcagcggccacggctgccagcgtgtcagttaaccctctgctagccaacggc
ctgctgccaggagtggatctgccgagtcttcaggccttgcaacaaaacctgcaaaacctg
cagtcgctgcaagtaacagcagggttaatgggaatgccagctggcctaactactggagga
gaagctaagaacatggctgccatgttccccatgctgctgtcagggatggctggattacca
aacttgctgggcatgggaggacttctgacaaagtctacagaatctgtttcagaggaaaaa
aagggaagcgattccaaggaggcagatacaaagaaagaaaggacagaagaccaaaataca
gatactggtggtgaaaactctgtttcaagttctccttcaacatcttctgctgctgcagct
gccaatcctctctctcttaacccattacttttgtccaacatactttacccagggatgctt
ctcactccaggccttaatcttcatatcccagctttgtctcagtctaatatttttgatgta
cagaacagtgaaagcaatgacacaggctcagctaagcccacagaagaaaaggaggaaatt
tctagggttagagatcaggaagacaaagggggaacagagccaagctctcacaatgaaaac
agcacagatgagggttcagagaaagcagatgcttcatctggatctgatagtacatcgtct
tcatctgaggattcagattctagtgatgaagactga
DBGET
integrated database retrieval system
