KEGG   Dryobates pubescens (Downy woodpecker): 104303285
Entry
104303285         CDS       T08526                                 
Symbol
EFTUD1
Name
(RefSeq) elongation factor Tu GTP-binding domain-containing protein 1 isoform X1
  KO
K14536  ribosome assembly protein 1 [EC:3.6.5.-]
Organism
dpub  Dryobates pubescens (Downy woodpecker)
Pathway
dpub03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:dpub00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    104303285 (EFTUD1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dpub03009]
    104303285 (EFTUD1)
Ribosome biogenesis [BR:dpub03009]
 Eukaryotic type
  Pre-60S particles
   GTPases
    104303285 (EFTUD1)
SSDB
Motif
Pfam: GTP_EFTU EFL1 EFG_C EFG_III EF-G_D2 GTP_EFTU_D2 EFG_IV MMR_HSR1 SSXT
Other DBs
NCBI-GeneID: 104303285
NCBI-ProteinID: XP_009902197
UniProt: A0A093GSE3
LinkDB
Position
Unknown
AA seq 1139 aa
MVLTSVGKMVELQKKTSAIRNICVLAHVDHGKTTLADCLISSNGIISSRLAGKLRYLDSR
EDEQVRGITMKSSAISLHFVKGDQEYLINLIDSPGHVDFSSEVSTAVRLCDGCIIVVDAV
EGVCPQTQAVLRQAWLENIRPVLVINKIDRLIVELKLTPQEAYLHLKNILEQINAVTGTL
FTSKVLEERAEKGTESENISDTSPGAEQIYDWSAGLEDTDDSHLYFSPDHGNVVFASAID
GWGFGIEHFAQLYSQRIGIKPEVLLKTLWGDYYLNTKAKRIMKGDQSKGKKPLFVQLVLD
NIWSLYEAVMKRDKEKIEKIVTSLGLKISARESRHADPKVQLNAICSQWLPVSDAVLSMV
CNKLPSPLDITAERVEKLMCVGARTFDSLPPETQELKSAFLKCSSEGKAPVIVFVSKMFA
VDAKALPQNKPRPLTQEEIAHRRELAKRRHAEKMAANQGKEMTEKPQSENSSEVTGNTGD
TKGEEQEPAGQAEIMTSKAMKQEADNKESFIAFARVFSGVVQRGQKIFVLGPKYDPAESL
HTLSSQCSPTNDLPLIPHMTCCTLENLYLLMGRELEDLEEVPAGNVLGIGGLQDVVLKSA
TLSTSLACPPFTPLNFEATPIVRVAVEPKHPSDMPQLVRGMKLLNQADPCVQVLIQETGE
HVLVTAGEVHLQRCLDDLKQRFAKVEISVSAPIIPFRETITRPPKVDMVNEEIGKQQKVA
VIHQTKEDQNKIPEGVQVDPDGLITMSTPNKQATLSVRAVPLPEEVTRLLEENSDLIRTM
EQLNTSLNEDKKSHEINQKTLDRIKEFKQKLEQNLQGRKWRNAVDQIWSFGPRKCGPNIL
LYNFEGYKRSVWQCLGNAVKEVSKYRDFDNSIVSGFQLATLSGPMCEEPLMGVCFTVEKW
EIHKAGETLSTSGQDSGECDTVEHTQNEDTAQTSSCTDEVCSLNEHQESGQSVPKSPEKV
SKQKGEVLLADCYGPFSGQLIATMKEACRYALQAKPQRLMAAMYTCEIMATAEVLGRVFA
VLSKREGRVLQEEMKEGTDVFIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEIIS
SDPFWVPTTEEEYLHFGEKADSENQARKYMNAVRKRKGLYVEEKIVEHAEKQRTLSRNK
NT seq 3420 nt   +upstreamnt  +downstreamnt
atggtgctcacaagtgtgggaaagatggttgagctccagaagaagacttctgccatcaga
aatatctgtgtgttagcccacgtggaccatggcaaaactactctagctgattgcctaata
tctagcaatggaataatctctagccgcttggcaggaaagctgagatacctggacagcaga
gaagatgaacaggtccgaggaataacaatgaaatctagtgcaatttcattgcattttgtg
aaaggtgatcaggagtatctgattaatttaatagactccccagggcacgtggatttttct
tcagaagtatctactgctgtccgactctgtgatggttgcatcatagtggtggatgctgtt
gaaggagtctgtccacagactcaagcagttctacggcaagcatggctagaaaatatacgg
ccagtgctggtgatcaataaaatcgatcgcttgattgtggagctcaagctcaccccacag
gaggcatacttgcaccttaagaatatcttagagcagatcaatgcagtcactggaacactc
tttacctccaaagtcttagaagaaagagctgagaaaggaacagaaagtgaaaatatttca
gacacttcaccaggagcagagcaaatttatgactggagtgctggcttggaagatactgat
gattcacatctttatttttcaccagaccatggaaatgtggtgtttgccagtgcgatcgat
ggctggggctttggcattgagcattttgcccaactgtacagccaaaggattggaatcaag
cctgaagtacttttgaagaccttatggggagattattatttaaatacaaaagcaaagagg
ataatgaaaggtgatcagtcaaaaggaaagaaacctctgtttgtgcagttggtgctggac
aacatttggagtctgtatgaagctgttatgaaaagagacaaagaaaaaattgaaaagatt
gtcacctctttgggactgaagattagtgcgcgggagtcacgccacgcagaccctaaagtt
cagcttaatgctatttgtagtcagtggctaccagtatctgatgcagtcctctccatggta
tgtaataagcttcccagtcctcttgacatcactgcagagagagtggaaaagctgatgtgt
gttggagctagaacatttgattctttgccaccagaaactcaggagctgaaaagtgctttt
ctgaaatgcagtagcgaaggaaaagcccctgttattgtctttgtttccaaaatgtttgct
gttgatgcaaaagcattaccacaaaataaaccaaggcctttaactcaagaagaaatagct
catcggcgtgagcttgcaaaacgaaggcatgcagaaaaaatggcagcaaatcaaggaaag
gagatgacagaaaagccccagagtgaaaattcatctgaagtgactgggaatactggtgat
acaaaaggtgaggagcaagagcctgctggtcaagcagagatcatgacctcaaaggcaatg
aaacaggaagcagacaacaaggagtctttcattgcttttgctagagtgttcagtggtgtg
gtgcaaagaggacaaaagatatttgttttgggaccaaaatatgatcctgctgagtctttg
catacgctgtcttcacaatgctcccctacaaatgatctgccattaatacctcatatgact
tgctgtacattagagaatctctacttgcttatgggaagagaacttgaagatcttgaagaa
gtacctgcaggaaatgttctaggaataggagggctgcaagatgttgtgctgaagtctgca
acactgtcgacgtccctagcttgtccaccgtttacacctctcaacttcgaggccacgccg
attgtgcgggtagctgttgagcccaaacatccaagtgatatgcctcagctggttagagga
atgaagcttttaaaccaagctgatccctgtgtccaagttttaatccaggagacaggagag
catgtgctagtgacagcaggagaagttcatcttcagcgttgcttggatgacctgaaacaa
aggtttgcaaaggtagagattagcgtgtccgcacctattataccattccgagagacaata
acaagacctccaaaagtcgatatggtgaatgaagaaataggaaagcagcagaaagttgct
gtcatacaccaaacaaaagaggaccaaaataaaattcctgaaggagtgcaggttgatcca
gatgggcttattacaatgtctactccaaacaaacaagctactctcagcgtaagagctgtg
ccgcttcctgaagaggtgactcgacttcttgaagaaaacagtgacttgattcgaactatg
gagcagctcaacacgtctctgaatgaagataaaaaaagtcatgagataaatcagaagact
cttgacaggattaaggaattcaaacaaaagttggagcaaaatctgcagggaagaaagtgg
agaaatgctgttgatcagatctggtcatttggaccgaggaagtgtgggcctaatattttg
ttatataattttgagggctataaaaggtctgtgtggcagtgccttggcaacgctgtgaaa
gaagtaagtaaatacagagactttgacaacagcatagtaagtggatttcagttggctacg
ctttcaggtcccatgtgtgaagaacctctcatgggggtttgttttacggtggaaaaatgg
gaaatacataaagctggagagacgctgtcaactagcggtcaggattcaggggaatgtgac
accgtagaacacacacaaaatgaagatactgctcaaacaagcagttgcactgatgaagtt
tgcagcttgaatgaacaccaggagagcggccaaagtgttccaaaatcacctgagaaagtt
agtaaacaaaaaggggaagttttacttgcagattgttatggtcccttctctgggcaactg
attgccaccatgaaggaagcttgtcgttatgctttgcaagcaaaaccgcagaggctaatg
gcagcaatgtacacgtgtgaaatcatggctactgcagaagttttaggtcgtgtgtttgct
gtcttgtccaaaagagaaggcagagtgttacaggaggagatgaaagaggggacagatgtg
tttattattaaggcagtcctgccagtagcagaaagttttggctttgctgatgaaatcagg
aagagaactagtggcctggccagtccacagctggtgttcagccactgggagatcatttca
agtgatcccttctgggtgccaaccaccgaagaagaatatttgcactttggggaaaaggca
gactcggagaaccaggcccgcaagtacatgaacgcagtaaggaagcgaaagggactttat
gtagaagaaaaaatcgtggagcacgctgaaaagcaaagaactctcagtcgaaataagtag

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