Dryobates pubescens (Downy woodpecker): 104303285
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Entry
104303285 CDS
T08526
Symbol
EFTUD1
Name
(RefSeq) elongation factor Tu GTP-binding domain-containing protein 1 isoform X1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104303285 (EFTUD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpub03009
]
104303285 (EFTUD1)
Ribosome biogenesis [BR:
dpub03009
]
Eukaryotic type
Pre-60S particles
GTPases
104303285 (EFTUD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
EF-G_D2
GTP_EFTU_D2
EFG_IV
MMR_HSR1
SSXT
Motif
Other DBs
NCBI-GeneID:
104303285
NCBI-ProteinID:
XP_009902197
UniProt:
A0A093GSE3
LinkDB
All DBs
Position
Unknown
AA seq
1139 aa
AA seq
DB search
MVLTSVGKMVELQKKTSAIRNICVLAHVDHGKTTLADCLISSNGIISSRLAGKLRYLDSR
EDEQVRGITMKSSAISLHFVKGDQEYLINLIDSPGHVDFSSEVSTAVRLCDGCIIVVDAV
EGVCPQTQAVLRQAWLENIRPVLVINKIDRLIVELKLTPQEAYLHLKNILEQINAVTGTL
FTSKVLEERAEKGTESENISDTSPGAEQIYDWSAGLEDTDDSHLYFSPDHGNVVFASAID
GWGFGIEHFAQLYSQRIGIKPEVLLKTLWGDYYLNTKAKRIMKGDQSKGKKPLFVQLVLD
NIWSLYEAVMKRDKEKIEKIVTSLGLKISARESRHADPKVQLNAICSQWLPVSDAVLSMV
CNKLPSPLDITAERVEKLMCVGARTFDSLPPETQELKSAFLKCSSEGKAPVIVFVSKMFA
VDAKALPQNKPRPLTQEEIAHRRELAKRRHAEKMAANQGKEMTEKPQSENSSEVTGNTGD
TKGEEQEPAGQAEIMTSKAMKQEADNKESFIAFARVFSGVVQRGQKIFVLGPKYDPAESL
HTLSSQCSPTNDLPLIPHMTCCTLENLYLLMGRELEDLEEVPAGNVLGIGGLQDVVLKSA
TLSTSLACPPFTPLNFEATPIVRVAVEPKHPSDMPQLVRGMKLLNQADPCVQVLIQETGE
HVLVTAGEVHLQRCLDDLKQRFAKVEISVSAPIIPFRETITRPPKVDMVNEEIGKQQKVA
VIHQTKEDQNKIPEGVQVDPDGLITMSTPNKQATLSVRAVPLPEEVTRLLEENSDLIRTM
EQLNTSLNEDKKSHEINQKTLDRIKEFKQKLEQNLQGRKWRNAVDQIWSFGPRKCGPNIL
LYNFEGYKRSVWQCLGNAVKEVSKYRDFDNSIVSGFQLATLSGPMCEEPLMGVCFTVEKW
EIHKAGETLSTSGQDSGECDTVEHTQNEDTAQTSSCTDEVCSLNEHQESGQSVPKSPEKV
SKQKGEVLLADCYGPFSGQLIATMKEACRYALQAKPQRLMAAMYTCEIMATAEVLGRVFA
VLSKREGRVLQEEMKEGTDVFIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEIIS
SDPFWVPTTEEEYLHFGEKADSENQARKYMNAVRKRKGLYVEEKIVEHAEKQRTLSRNK
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atggtgctcacaagtgtgggaaagatggttgagctccagaagaagacttctgccatcaga
aatatctgtgtgttagcccacgtggaccatggcaaaactactctagctgattgcctaata
tctagcaatggaataatctctagccgcttggcaggaaagctgagatacctggacagcaga
gaagatgaacaggtccgaggaataacaatgaaatctagtgcaatttcattgcattttgtg
aaaggtgatcaggagtatctgattaatttaatagactccccagggcacgtggatttttct
tcagaagtatctactgctgtccgactctgtgatggttgcatcatagtggtggatgctgtt
gaaggagtctgtccacagactcaagcagttctacggcaagcatggctagaaaatatacgg
ccagtgctggtgatcaataaaatcgatcgcttgattgtggagctcaagctcaccccacag
gaggcatacttgcaccttaagaatatcttagagcagatcaatgcagtcactggaacactc
tttacctccaaagtcttagaagaaagagctgagaaaggaacagaaagtgaaaatatttca
gacacttcaccaggagcagagcaaatttatgactggagtgctggcttggaagatactgat
gattcacatctttatttttcaccagaccatggaaatgtggtgtttgccagtgcgatcgat
ggctggggctttggcattgagcattttgcccaactgtacagccaaaggattggaatcaag
cctgaagtacttttgaagaccttatggggagattattatttaaatacaaaagcaaagagg
ataatgaaaggtgatcagtcaaaaggaaagaaacctctgtttgtgcagttggtgctggac
aacatttggagtctgtatgaagctgttatgaaaagagacaaagaaaaaattgaaaagatt
gtcacctctttgggactgaagattagtgcgcgggagtcacgccacgcagaccctaaagtt
cagcttaatgctatttgtagtcagtggctaccagtatctgatgcagtcctctccatggta
tgtaataagcttcccagtcctcttgacatcactgcagagagagtggaaaagctgatgtgt
gttggagctagaacatttgattctttgccaccagaaactcaggagctgaaaagtgctttt
ctgaaatgcagtagcgaaggaaaagcccctgttattgtctttgtttccaaaatgtttgct
gttgatgcaaaagcattaccacaaaataaaccaaggcctttaactcaagaagaaatagct
catcggcgtgagcttgcaaaacgaaggcatgcagaaaaaatggcagcaaatcaaggaaag
gagatgacagaaaagccccagagtgaaaattcatctgaagtgactgggaatactggtgat
acaaaaggtgaggagcaagagcctgctggtcaagcagagatcatgacctcaaaggcaatg
aaacaggaagcagacaacaaggagtctttcattgcttttgctagagtgttcagtggtgtg
gtgcaaagaggacaaaagatatttgttttgggaccaaaatatgatcctgctgagtctttg
catacgctgtcttcacaatgctcccctacaaatgatctgccattaatacctcatatgact
tgctgtacattagagaatctctacttgcttatgggaagagaacttgaagatcttgaagaa
gtacctgcaggaaatgttctaggaataggagggctgcaagatgttgtgctgaagtctgca
acactgtcgacgtccctagcttgtccaccgtttacacctctcaacttcgaggccacgccg
attgtgcgggtagctgttgagcccaaacatccaagtgatatgcctcagctggttagagga
atgaagcttttaaaccaagctgatccctgtgtccaagttttaatccaggagacaggagag
catgtgctagtgacagcaggagaagttcatcttcagcgttgcttggatgacctgaaacaa
aggtttgcaaaggtagagattagcgtgtccgcacctattataccattccgagagacaata
acaagacctccaaaagtcgatatggtgaatgaagaaataggaaagcagcagaaagttgct
gtcatacaccaaacaaaagaggaccaaaataaaattcctgaaggagtgcaggttgatcca
gatgggcttattacaatgtctactccaaacaaacaagctactctcagcgtaagagctgtg
ccgcttcctgaagaggtgactcgacttcttgaagaaaacagtgacttgattcgaactatg
gagcagctcaacacgtctctgaatgaagataaaaaaagtcatgagataaatcagaagact
cttgacaggattaaggaattcaaacaaaagttggagcaaaatctgcagggaagaaagtgg
agaaatgctgttgatcagatctggtcatttggaccgaggaagtgtgggcctaatattttg
ttatataattttgagggctataaaaggtctgtgtggcagtgccttggcaacgctgtgaaa
gaagtaagtaaatacagagactttgacaacagcatagtaagtggatttcagttggctacg
ctttcaggtcccatgtgtgaagaacctctcatgggggtttgttttacggtggaaaaatgg
gaaatacataaagctggagagacgctgtcaactagcggtcaggattcaggggaatgtgac
accgtagaacacacacaaaatgaagatactgctcaaacaagcagttgcactgatgaagtt
tgcagcttgaatgaacaccaggagagcggccaaagtgttccaaaatcacctgagaaagtt
agtaaacaaaaaggggaagttttacttgcagattgttatggtcccttctctgggcaactg
attgccaccatgaaggaagcttgtcgttatgctttgcaagcaaaaccgcagaggctaatg
gcagcaatgtacacgtgtgaaatcatggctactgcagaagttttaggtcgtgtgtttgct
gtcttgtccaaaagagaaggcagagtgttacaggaggagatgaaagaggggacagatgtg
tttattattaaggcagtcctgccagtagcagaaagttttggctttgctgatgaaatcagg
aagagaactagtggcctggccagtccacagctggtgttcagccactgggagatcatttca
agtgatcccttctgggtgccaaccaccgaagaagaatatttgcactttggggaaaaggca
gactcggagaaccaggcccgcaagtacatgaacgcagtaaggaagcgaaagggactttat
gtagaagaaaaaatcgtggagcacgctgaaaagcaaagaactctcagtcgaaataagtag
DBGET
integrated database retrieval system