Dryobates pubescens (Downy woodpecker): 104303356
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Entry
104303356 CDS
T08526
Symbol
ACAN
Name
(RefSeq) LOW QUALITY PROTEIN: aggrecan core protein
KO
K06792
aggrecan 1
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
dpub00535
]
104303356 (ACAN)
00536 Glycosaminoglycan binding proteins [BR:
dpub00536
]
104303356 (ACAN)
04091 Lectins [BR:
dpub04091
]
104303356 (ACAN)
Proteoglycans [BR:
dpub00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
104303356 (ACAN)
Glycosaminoglycan binding proteins [BR:
dpub00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
104303356 (ACAN)
Lectins [BR:
dpub04091
]
C-Type lectins
Lecticans
104303356 (ACAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
EGF
EGF_DL_JAG
UL45
Motif
Other DBs
NCBI-GeneID:
104303356
NCBI-ProteinID:
XP_009902273
LinkDB
All DBs
Position
Unknown
AA seq
2112 aa
AA seq
DB search
MTTLLLVFVCFQVITAATTLELSDSSDGLEVKIPEQSPLRVILGSSLNIPCYFNIPEEED
SSALLTPRIKWSKLSNGTEVVLLVATGGKIRLNSEYREVISLPNYPAIPTDATLEIKALR
SNHTGIYRCEVMYGIEDRKDTIEVLVKGVVFHYRAISTRYTLNFEKAKQACIQNSAVIAT
PEQLQAAYEDGYEQCDAGWLADQTVRYPIHWPRERCYGDKDEFPGVRTYGVREPDETYDV
YCYAEQMQGKVFYASAPEKFTFQEASDKCRSLGARLATTGELYLAWKDGMDVCSAGWLAD
RSVRYPISRARPNCGGNLVGVRTVYLHANQTGYPHPDSRYDAICYSGEDVGSLIPGQFID
ELGSGLGSGFTVQTVTQTEVELPLLHNATEEEARGSIATLEPIEITPTATQLYDGFTGLP
ELFATSLTVETTAPEENVTREDVTGGWTVPAELTTVALGTAITTEGAEVSSLEDVVGVTA
TPGLESASTSTVEDQLVQVTAAPGVGLLPEQPISPTGVVFHYRAASSRYAFSFIQAQEAC
LENNAVIATPEQLQAAYEAGFDQCDAGWLRDQTVRYPIVNPRSNCLGDKENSPGVRSYGM
RPASETYDVYCYIDRLRGEVFFATQPEQFTFPEAQRYCESQNATLASVGHLHAAWRQGLD
RCYAGWLGDRDLTAEVGDIGVXCTSVASXAVNFWQPPSIAFFVPALPPVEEDGITSFSED
VMATQVIPGVEGVPSGEEVTVETEFATQPENQTAWGPEIFPTDVSLLPVSPSAFPPATTT
PEETSTYVSTGEVSGQVTEPGEHQASGEPSASGWASGVPDTSGEPTSGGFEHSGEHSGAG
ESGLPSGDLQTSGFLPGESELPSGDLSGVPSGVVDIGGLPSAEEEVLVPASRVPDISGMP
SGVESSGQPSGFSGEISGTELVSGVSSGGESGLASGFPTISLVDTTLVEVVTTAPERQEE
GQGSVGVSGEGDFSGLPPTEWDTSGGAQGLPSGAELSGEPSGVPELSGEPSGVPELSGEP
SGVPELSGEPSGVPELSGEPSGVPELSGEPSGVPELSGEPSGVPELVREPSRVPEHGGLP
SGLDASGEPSGTHEISGLTDLSGLISGSSGSGEASGITFIDATLVEVATTPSVTRAEAKE
VLEISGLPSGGEDVSGMVSGGLGISGEPSGHIDFGGSASGALETGGHPSGGVDSSGEVSG
VDVTSGLLSGEGSGLTSGFPTVSLVDTTLVEVVTQTSVDQEVEGGPSGVTEVSGVASGDR
GLSGEGSGAVETSGFPSETGDISGEPSGIPYISGDISGAVDLSGQSSSVTDISGETSGFP
EVTLVTSDLVEVVTRPTVSQELGGETAVTFPSSFEPSGEVSASGEPSEETSALPESGAET
SSAYEISGETSAFPEASTETSTGQEISGETSAFPESAVETSTIQEISGETSAFPGFSTET
SSVQETSGETSAFPEISIETSTVQEISGESSAFPEISIETSTVHEISGESSAFPDIRIET
STSQEARGETSGYPEITIETSTVNETSGETSAFPEISIETSTVQETSGETSAFPEISIET
STVQETSGETSAFPEISIETSTVQETSGETSAFPEISIETSTVHEISGESSAFPEIRIET
STSQEARGEASAFPEISIETSTVHESSGEASAFPEVRIETSTSQEARGESSAYPQISLET
STGQEVSGESSALPEIRIETSTSQEAWGETSAFPETSTAAAAVHRSSAEAAALPAASLEP
AAAASATGQPSGAPEETPGATSGAVTRSVAGIWEETAVPDAVTSTSSADAEPTQPPRNPE
ETQLETQPSPPAVSGPETETAAAPDTPHLLATATAVLPQVSQEAIDALGPTTQDTDECHS
SPCLNGATCVDGSLGDPFKCLCLPSYGGDLCDMDLENCEEGWIKFQGHCYRHFEERETWM
DAENRCRQHQAHLSSIITPEEQEFVNSHAQDYQWIGLNDRAVENDFRWSDGHSMQFENWR
PNQPDNFFAAGEDCVVMIWHERGEWNDVPCNYHLPFTCKKGTVACGEPPVVENARTFGQR
KDRYEINSLVRYQCDQGYIQRHVPTIRCQPSGQWEQPQISCTSPSNYQRRLYKRSPRSRS
RPSSRAVHRPTH
NT seq
6339 nt
NT seq
+upstream
nt +downstream
nt
atgaccactttgctattagtgtttgtgtgcttccaagtcatcactgcagccaccaccttg
gagctctcagacagtagtgatggcctggaagtgaagatacctgagcagtctcccctgcgt
gttatcctgggaagctccctgaacatcccttgctacttcaacatcccagaggaagaggac
agcagcgctctgctgacgccccgcatcaaatggagcaagctgtcgaacggcaccgaagtc
gtcttgctggtggccacaggggggaagatccggctcaactcggagtacagggaggtgatc
tctttgcccaactacccagccatccccactgatgccaccctggaaatcaaggcactgagg
tccaaccacactggcatctatcgctgtgaagtgatgtacggcattgaggacaggaaagac
acaatagaggtcctggtgaaaggcgtcgtgttccactacagagcaatctccaccaggtac
accttgaactttgagaaagcaaagcaggcctgcatccagaacagcgctgtcattgctact
cctgagcagctgcaagctgcctacgaggatgggtacgagcagtgcgacgccggctggctg
gctgatcagactgtcaggtaccccatccactggcctcgggagcgctgctatggtgacaag
gatgaatttccaggagtgaggacctacggtgtccgtgagccagatgaaacctatgatgtt
tactgctatgcagagcaaatgcaaggcaaagtcttctacgccagcgccccggagaagttc
accttccaggaagcttcggacaagtgccgcagcttaggagctcgcttggccaccacgggg
gagctgtacctggcctggaaggacgggatggacgtgtgcagcgcgggctggctggccgac
cgcagcgtgcgctaccccatctcccgcgcccggcccaactgcggcggcaacctggtgggg
gtgaggacggtctacctgcacgccaaccagaccgggtacccccaccccgactcgcgctac
gacgccatctgctacagcggggaagatgttggaagcctgatcccagggcagttcatcgat
gagctaggcagtgggctgggcagtggcttcactgtgcagactgtcacccagactgaagtg
gagctgcccctgctacacaatgccacagaggaggaggctcgcggcagcatcgccaccctg
gagcccatcgagatcacacccacggccacccagctgtatgatggcttcactggcctgcct
gagctctttgccacaagtctgacagtagagacaactgccccagaggagaatgtgaccagg
gaagatgtcacagggggctggactgtacctgcagagctcaccaccgtagccttaggcact
gccatcaccactgaaggggcagaggtgagctccctggaagatgtcgtgggggtgactgcc
acgccaggactagagtctgcctccacgtccacggtggaagatcagctggttcaagtgaca
gcagcccctggtgtgggtctcctcccagagcagcccatctcccccacaggggtggtgttt
cactaccgtgctgccagcagcagatatgccttctccttcatccaagcccaggaggcctgc
ctggagaacaacgcagtgatcgccacccctgagcagctgcaggctgcctacgaggctggc
ttcgaccagtgcgacgccggctggctgcgggaccagacagtcaggtaccccattgtgaac
ccccgaagcaactgcctgggagacaaagagaactctccaggggtgcggtcgtacggcatg
cgcccggcctcagagacctacgatgtgtactgctacattgacaggctcaggggtgaagtg
ttcttcgcaacccagccggagcagttcaccttcccagaagctcagcggtactgcgagagc
cagaacgccaccctggcctctgtggggcacctgcacgcagcctggcggcagggcctggac
aggtgctacgctggctggctgggagacagggatctcacagcggaggttggggacattggg
gtgtgatgcacttcagtggcatcttgagcagtgaatttttggcagcccccttcaatagct
ttttttgttccagctttgccacctgtggaggaagatggaatcacctcattctctgaagat
gtgatggcaacccaagtgatccctggcgtggagggggtaccctctggggaagaggtgact
gtggagacagagtttgccactcagcctgagaatcagacagcctgggggccagagatcttt
ccaactgatgtgtcactcctcccagtgagtccctctgcttttcctccagccaccacaaca
ccagaggagaccagcacctatgtttccaccggtgaagtgtcagggcaggtgactgaacct
ggagaacaccaagccagtggtgaaccttcagcatccgggtgggcttctggagtcccagat
acaagtggggaaccaacttctggaggctttgaacacagtggagaacactcaggggctgga
gaaagtggattaccatcgggagacctgcaaaccagtggcttcctacctggagaaagtgag
ctgccctcaggggatctaagcggggtgccttctggcgtcgttgacatcggcggcctgccc
tctgcagaggaagaagtattggtgcctgcttccagggtaccggacatcagtgggatgcca
tctggagtggagagcagtgggcagccttctggatttagtggagaaatctctggcacggag
ctagtcagcggtgtgtcatctggaggggaaagtggactcgcctctggtttcccaaccatc
tccctggtggataccaccttggtggaagtcgttacgacggcgccagaacggcaggaggag
ggacagggatccgtcggagtcagcggggaaggagatttctcaggcctcccacccaccgaa
tgggacaccagtggtggagcccagggcttaccctcaggagctgagctcagtggagagcct
tctggggtacctgagctcagcggggagccctctggggtgcccgagctcagcggggagccc
tctggggtacccgagctcagtggggagccctctggagtgcctgagctcagtggggagccc
tctggggtacccgagctcagcggagagccctctggggtgcctgagctcagtggggagcct
tctggggtacctgagcttgtcagggagccctctagggtgcctgagcacggtgggttgccc
tcaggactggatgccagtggagaaccatctgggacacatgagatcagtggcctgacagac
ctaagtggccttatttctggtagcagtggaagcggcgaggcctcaggcatcaccttcata
gacgccaccttggtggaagtggcaacgaccccctcggtgacaagggcagaagctaaagag
gttctggaaatcagtggattgccttctggaggtgaagatgtgtcaggcatggtttctggg
ggtttaggcatcagtggtgagccttctgggcacatagactttggtgggagtgcttctgga
gcgctcgagacgggcgggcacccgagcggaggggttgacagcagtggagaagtctctgga
gttgatgtcaccagtggcctactgtctggagagggaagtggactcacctctggcttcccc
acagtctctcttgtggataccactttggtggaagttgtaacccagacctcagttgaccaa
gaggtggaaggaggaccatctggggtgactgaagtcagtggagttgcttctggagacaga
ggactgtctggagaagggtctggagcagtggagactagtgggttcccttcagagacagga
gacatcagtggagagccatctgggatcccatacatcagtggagacatttctggagccgta
gatctaagtggacaatcttcctcagtgactgatattagtggggagacatcagggtttcca
gaagtcactttagtcacttctgatttggtagaagttgtgacaaggccaacagtgtcacag
gaacttggaggggaaacagctgtcacctttccctccagctttgagccaagtggggaggtc
tctgcttctggtgaaccgagtgaggaaacatctgcattgccagaaagtggtgcagaaaca
tcatcagcttatgaaatcagtggggaaacatctgcatttcctgaagctagcacagagaca
tccacgggtcaagaaatcagtggggaaacatctgcatttcctgaaagtgctgtagaaaca
tccacaattcaggaaatcagtggggaaacctctgccttccctggatttagcacagaaacc
tcttcagtgcaggaaaccagtggagagacctctgccttccctgagatcagcatagagact
tccacagtgcaggaaatcagtggagaaagttctgcctttcctgagatcagcatagagact
tccacagtccatgaaatcagtggagaaagttctgcctttcctgatattaggatagaaaca
tccacaagtcaagaagccaggggtgaaacctctggctaccctgaaattaccattgaaacc
tccacagtgaatgaaaccagtggagaaacctctgccttccctgagatcagcatagagact
tccacagtgcaggaaaccagtggagagacctctgccttccctgagatcagcatagagact
tccacagtgcaggaaaccagtggagagacctctgccttccctgagatcagcatagagact
tccacagtgcaggaaaccagtggagagacctctgccttccctgagatcagcatagagact
tccacagtccatgaaatcagtggagaaagttctgcctttcctgagatcagaatagaaacc
tccacaagtcaggaagcccgaggtgaagcctctgcatttcctgagatcagcatagagact
tccacagtccatgaaagcagtggggaagcctctgcgttccctgaggttagaatagaaacc
tccacaagtcaagaagccaggggtgaatcgtctgcctacccccagatcagcctagaaacc
tccacaggtcaagaagtaagcggggaaagctctgcgcttcctgagatcagaatagaaacc
tccaccagtcaagaagcctggggtgaaacatctgcattccccgagacgagcacagcagca
gccgcggtgcacagaagcagtgcagaagcagctgcgttgcctgctgctagcttggagcca
gccgccgcagcctcggccaccgggcagccctctggtgctcccgaggagactcctggtgca
acgtctggagcggtgacgcgctcggtggcaggcatctgggaggaaaccgctgtcccagac
gctgtaacgagcaccagcagcgcggatgctgaacccacgcagccacccaggaaccctgaa
gagactcagctggaaacacagccctccccccctgcggtgtcgggaccagagacagagacg
gctgctgctccagacaccccccatctgctggccacagccactgctgtcctgcctcaagtc
tcacaagaagccatagacgccttaggacccaccacacaagacactgatgagtgccactca
agcccctgtctgaatggagctacctgcgtggatgggagccttggtgaccctttcaaatgc
ttgtgccttcccagctatggaggggacctgtgtgacatggacctggaaaactgtgaggag
ggttggatcaagttccaaggccactgctacaggcactttgaagagagggagacttggatg
gatgcggagaacagatgtcgacagcaccaagcccacctgagcagcatcatcaccccagag
gagcaagaatttgtgaacagtcacgcacaggactaccagtggattggcctcaatgacaga
gctgtggagaacgacttccgctggtccgacgggcactccatgcaatttgagaactggagg
cccaaccagccggataacttcttcgcggcgggcgaggactgcgtcgtgatgatctggcac
gagcgaggcgaatggaacgacgtcccctgcaactatcacctccctttcacctgcaagaaa
ggaacagtggcctgtggggagccccccgtggtggagaacgccaggacctttggccagagg
aaggaccgctacgaaataaactccctggtgcggtaccagtgcgaccaaggctacatccag
cgccacgtgcccaccatccgctgccagcccagcgggcagtgggagcagccacagatatcc
tgcaccagcccctccaactaccagcgcaggctatacaagaggagccccaggagccggtcg
agacccagcagcagagccgtgcacagacccacccattag
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integrated database retrieval system
