Dryobates pubescens (Downy woodpecker): 104303374
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Entry
104303374 CDS
T08526
Symbol
IFT88
Name
(RefSeq) intraflagellar transport protein 88 homolog
KO
K16474
intraflagellar transport protein 88
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
dpub03037
]
104303374 (IFT88)
Cilium and associated proteins [BR:
dpub03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
104303374 (IFT88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_7
TPR_19
TPR_8
TPR_14
TPR_6
TPR_16
TPR_11
ANAPC3
TPR_9
TPR_10
ARM_TT21_4th
TPR_17
ARM_TT21_5th
HEAT_Nup120
TPR_15
TPR_CcmH_CycH
ARM_TT21_C
ARM_TT21_2nd
DUF6584
TPR_21
HAT_PRP39_C
DUF2989
Coatomer_E
FumaraseC_C
Motif
Other DBs
NCBI-GeneID:
104303374
NCBI-ProteinID:
XP_009902289
LinkDB
All DBs
Position
Unknown
AA seq
823 aa
AA seq
DB search
MFHRKMMHNVHLAPEVDEDDLYSGYNDYNPTFDTEDLENDVAFQQAARTSHGRRPPVTAK
IPGTSASRPLATGFGSKATLNSSMGRPMTGAIQDGVARPMTAVHAAGYTKAAMRGSSFDP
LGQARGPAPPLEVKNADSSEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKEAGRKE
RLLVRQREQIAAPENINLDLTYSVLFNLASQYAANEMYAEALNTYQVIVKNKMFINGGRL
KVNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVAFIKTGQYVDASSSF
EHIMSMSPNLKAGFNLILCYFAMGNSEQMKKAFQNLIAVPLEVDYDDKYISPNDDPRMNL
LIEAIKNDSLTQIERERKSMAEEYIMTAAKLIAPVIETSFAVGYDWCVEAVKASHYVELA
NDLEINKAITYLRQQDFNQALETLKMFEKKDSRVKSAAATNLSFLYYLENELAQATSYAD
LAVNSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNLGLTYKKLNRI
DEALDCFQKLHAILRDSAQVIHQIAQIYEIMEDPNQAIEWLLQLISVVPTDPHILSKLGK
LYDNEGDKSQAFHYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIEYFERAALILPTQV
KWQLMVASCYRRSGNYQKALEKYKVIHRKFPENAECLRFLVRLCTDMGLKEVQEYMTKLK
KVEKLKEIREQRIKSGRDGSGRSRREGSAGGDSGGTKGERLSAKLKAFPGTSEPYESSSS
KEIDASYIDPLGPQAERPKTAARKRPEEDDFADEELGEDLLPE
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgtttcacagaaaaatgatgcacaatgtacatctggcccctgaagttgatgaagatgat
ctttattctggctacaatgactataatcccacgtttgacacagaggatttagaaaatgat
gtagcttttcaacaggcagcaagaacaagtcatggtagaagaccccctgtgacagccaaa
attcctggtacatcagcttcaagacctttagctactggatttgggtcaaaggcaacttta
aattcatctatgggaagaccaatgacaggagctatacaggatggggttgctcgaccaatg
acagcagtgcatgctgcaggttacacgaaggcagctatgagaggttcttcatttgatcct
cttggccaagcaagaggtcctgctccgcctctggaagtgaaaaatgcagacagttcagaa
gagaagattcggcagttggaaaaaaaagtgaatgaactggttgaagaaagctgcattgcc
aacagctgtggagacttgaaattggctctggagaaggcaaaagaggctggaagaaaggaa
agattattggtgagacaacgtgaacaaattgcagctccagaaaacatcaacttagacctc
acttactcagttcttttcaatctggccagtcagtatgctgctaatgaaatgtatgctgag
gcattgaatacttaccaagttatagtgaagaataagatgttcatcaatggaggcagactg
aaggtgaatatgggaaatatatatttaaaacaaaggaactattccaaagctatcaaattc
taccgcatggctctagaccagattcctagtgtccacaaagagatgaggattaaaataatg
caaaatatcggcgtggcattcattaaaactggccaatatgttgatgccagttcttcattt
gagcacataatgagcatgtccccaaacctgaaggcaggcttcaacttgatcctatgttat
tttgctatgggaaacagcgagcaaatgaaaaaagccttccaaaatctgattgcagttccc
ctagaagtggattacgatgataaatacatttccccaaatgatgatccacgtatgaatctg
ctgattgaagccattaaaaatgacagcttaacacaaatagaacgtgagaggaagtccatg
gcagaggaatacatcatgacagctgccaaacttattgcaccagtgatagagacatctttt
gcagtgggctatgactggtgtgttgaagcagtaaaagcttctcactatgtagagttagcc
aatgacctggaaataaataaagccatcacttatttgaggcaacaggattttaaccaggca
ctggagactttaaagatgtttgaaaaaaaggatagcagagtgaagagtgcagctgcaaca
aacctttccttcctttattatttggagaatgaattggcacaagcaaccagctatgcagat
ttagctgtaaattctgataggtacaatccagcagctctaactaacaaaggaaatactgtt
tttgcaaatggagactatgaaaaagcagctgaattttataaggaagctctaaggaacgat
tcctcatgcactgaagcactttataatcttggtttaacatacaagaagttaaacagaata
gatgaagctttggattgttttcagaaactccatgcaatccttcgagatagtgcccaagtc
attcatcagatagcacaaatatatgagatcatggaagatccgaatcaagccatagagtgg
ctcctgcagttgatcagtgtagtaccaactgacccacatatactttcaaagctagggaaa
ctgtatgataatgaaggtgacaaatcccaggcttttcattactattatgagtcgtaccgg
tatttcccttcaaacattgaggtcattgaatggcttggagcctattacattgacacccag
ttctgtgaaaaagccattgagtactttgaaagagcagcacttatcctacccacacaagtg
aagtggcagctgatggttgccagttgctacaggagaagcggtaactaccagaaagctcta
gagaagtacaaagtcattcacagaaaattccccgagaatgctgaatgcctccgattttta
gttcgtctctgcacagatatggggctgaaagaagtccaggaatatatgacaaagctcaag
aaagtggaaaaattaaaagaaataagagagcagcgcattaaatctggcagagatggcagt
ggacgtagccgcagagaaggaagtgctggtggtgatagtggtggtaccaaaggggaaagg
ctgagtgccaaactaaaagctttccctggaacaagtgaaccctatgaaagtagcagcagt
aaagaaatagatgcctcctacatagatcctcttggcccacaagcagaaagaccaaaaacc
gcagcaagaaaaagacctgaggaagatgactttgctgatgaagaactaggagaggatttg
cttccagaatag
DBGET
integrated database retrieval system
