Dryobates pubescens (Downy woodpecker): 104303451 Help Entry 104303451         CDS       T08526                                  Symbol TNR Name (RefSeq) LOW QUALITY PROTEIN: tenascin-R   KO K06252   tenascin Organism dpub  Dryobates pubescens (Downy woodpecker) Pathway dpub04510   Focal adhesion dpub04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:dpub00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     104303451 (TNR)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     104303451 (TNR)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:dpub00536]     104303451 (TNR) Glycosaminoglycan binding proteins [BR:dpub00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    104303451 (TNR) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  fn3 Fibrinogen_C EGF_TEN EGF_Teneurin EGF_Tenascin Ig_DSCAM-DSCAML_C Pur_ac_phosph_N Fn3_Dep-1_2nd FN3_Tor_3rd EGF_2 Lzipper-MIP1 Motif Other DBs NCBI-GeneID:  104303451 NCBI-ProteinID:  XP_009902374 LinkDB All DBs Position Unknown AA seq 1349 aa AA seqDB search MGTDSENPVLRNVLISFNLLLLGTILKPYECRLEVTTEPSGRPAVDEEGGLANCSPPIKE QPMVFHHIYNINIPLDSCCSSMFKSSGEEVSSEDDRLAEYAEQTSDSESQVTFTHKINLP KQACKCSTSLPSLQELLSRIEMLEREVSMLRDQCNSNCCQENAATGQLDYIPQCSGHGNF SLESCSCVCMEGWAGSNCSEPLCPRGCSSRGVCMEGQCICDNDYGGEDCSQLRCPAGCGS RGLCVDGECICEEGFTGEDCSELRCPRDCSGKGHCVNGTCVCREGFAGEDCGWLHCPNAC SGRGICQDGLCVCEEGYEGQDCSAVAPPENLRVTGIGDDSIELTWDNPGAATEYVVSYQP AVPGGTQLQQRVPGDWSSITIMELEPGVAYNISIYAVISDVLSMPVTSKVMTNIATPQGL KFKTITETTVEVQWEPFSFPFDGWEISFIPKNNEGGVIAQLPSTVTTFNQTGLKPGEEYT VTVVALKEQARSPPTSDSVSTLIDGPTQILVRDVSDTVAFVEWTPPRAKVDAILLKXTGE GGSTTFRLQPPLSQYSLQALRPGARYHLAVSALRGANESRPALAQFTTEIDAPKNLRVGS RTSASLELAWDNSEAEVQSYRVVYSTLAGEHYHEVLVPRETGPTTRATLEDLVPGTEYGI GISAVMDSQQSVPATMNARTELDSPRDLLVTASTETSISLAWTKASGPIDHYRVTFTPAS GMASEVTVPSNESQLTLSELEPGTEYTISIIAERGRQQSLEATVDAFTGVRPITQLHFSQ LTSSSVNITWSDPSPPADRLILSYSPRDEEAQQVTLDGSRRHASLTGLRPSTEYLVSLVA VHGAISSEPVVGSITTGIDAPKDLRVGNITQESMTVYWSPPIAAFDHYRISYRSAEGRID STAIASDVTEYPLLHLEPATKYEIAMKSVRGREESEVTSITVHTAMDAPLGVTATNITPT EVLLQWNPPLSDVESYVLVLTRRAGETILVDGVSQEYQLTNLLPSTTYTVSMYATNGPLT SQTISTNFTTLLDPPTNLTASEVTRRSALLSWVPPLGEMENYIMTYRTSDGSWKELIVDA EDTWIRLEGLSETTEYTVRLQAAQNTMRSGFISTTFTTGGRVFANPQDCAQHLMNGDTLS GVYTISINGDLSQRVQVYCDMTTDGGGWIVFQRRQNGLTDFFRKWADYRVGFGNLEDEFW LGLDNIHKITSQGRYELRIDMRDGQEAAYAYYDKFSIGDSRSLYKLRIGDYNGTSGDSLT YHQGRPFSTKDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQGINWYHWKGH EFSIPFVEMKMRPYNHRNISGRKRRSLQL NT seq 4050 nt NT seq  +upstreamnt  +downstreamnt atggggactgacagtgaaaacccagtcctgaggaacgtgctcatcagcttcaacttgctt ctgctgggcactatcctcaagccttatgagtgccggctggaggtgacaacagaaccatct gggaggccagcagtggatgaggagggtggccttgccaactgcagcccacccatcaaagag cagccaatggtcttccaccacatctacaacatcaacatccccctggacagctgctgctca tccatgttcaagtcttcgggtgaggaggtgagttcagaagacgaccggctggcagagtac gcggagcagacctccgacagcgagagccaggtcaccttcacccacaagataaacttaccc aagcaggcctgcaagtgctccacctccctcccatccctacaggagctgctgagcaggatt gagatgctggagagggaggtctccatgctccgggaccaatgcaactccaattgctgccaa gaaaatgcagccacagggcagctggattacatcccgcagtgcagcggccatgggaacttc agcctggagtcgtgcagctgcgtgtgcatggagggctgggccggcagcaactgctccgag cccctgtgtccgcggggctgctccagccgcggtgtctgcatggaggggcagtgcatctgc gacaacgactacgggggcgaggactgctcccagctgcgctgcccggccggctgcggctcc cgcgggctctgcgtggacggcgaatgcatctgcgaggagggcttcaccggcgaggactgc tccgagctgcgctgcccccgcgactgctcgggcaagggacactgcgtcaacggcacctgc gtctgccgggagggctttgccggggaggactgcggctggctgcactgccccaatgcctgc tccggcaggggcatctgccaggacggcctctgcgtctgtgaggaaggctacgaagggcag gactgctcggcagtggctcctcctgaaaacctgcgagtgacagggattggcgacgactcc attgagctgacatgggacaacccaggggcagccactgagtatgtggtctcataccagcca gcagtgccagggggcacccagctccagcagcgggtgcccggggactggagcagcatcacc atcatggagctggagccaggtgttgcctacaatatcagcatctacgcagtcatcagcgat gtcttgagcatgcctgtcacctccaaggtgatgaccaacattgccaccccacaggggctg aagttcaaaaccatcacagagacgacagtggaggtgcagtgggagcccttctcctttccc ttcgatggctgggagatcagcttcatccccaagaataacgagggtggtgtgattgcccag ctccccagcaccgtcaccaccttcaatcagacaggtctgaagccaggggaagagtacacc gtcaccgtagtggccctgaaggaacaagccaggagccctcccacctctgacagcgtctca actctcatcgacggcccgacgcagatcctggtgcgggacgtctcagacacggtggccttc gtggagtggacgccgccgcgcgccaaggtggacgccatcctgctgaagnngacgggcgaa gggggcagcaccaccttccgcctgcagccccccctcagccagtactccctgcaggccctg cgccccggcgcccgctaccacctcgctgtcagcgccctcaggggtgccaacgagagccgg ccggccctcgcccagttcaccacagagattgatgcccccaagaacctccgggtgggctcg cggacatccgccagccttgagctcgcctgggacaacagcgaggctgaggtgcagagctac agggtggtctacagcaccctggccggggagcactaccatgaagtcctggtgccacgtgag actggtcccaccacccgggctaccctcgaagatctggtgccggggacagagtatggcatt gggatctcagccgtgatggacagccagcagagtgtgccagcaaccatgaatgccaggact gagcttgacagccctcgggatctcctggtgacagcctccacagagacatccatctcactg gcctggaccaaagcctcaggacccatcgatcactaccgtgtcaccttcacccctgcctca gggatggcctccgaagtgacagtgcccagcaatgagtcacagctcaccctctcagagctg gagcctgggacagagtacaccatctccatcattgccgagaggggacgccagcagagcctg gaggccaccgtggatgccttcacaggggtccggcccatcacacagctccacttctcccag ctgacatcctccagtgtgaacatcacatggagtgacccatccccaccagcagatcgcctc atcctctcctacagcccccgggatgaggaggcccagcaggtcacactcgatggcagccgc aggcacgccagcctgacgggcttgcggccatccaccgagtacctggtgtcactggtggct gtgcacggtgccatcagctccgagcccgttgtgggctccatcacaacagggattgatgcg ccaaaggacctcagggtgggcaacatcacccaggagtccatgacggtgtactggagccct cccatcgctgcctttgaccactacagaatctcttaccgctctgctgaagggaggatagac agcactgccatcgccagcgatgtcaccgagtaccccctcctccacctggagcctgccacc aagtatgagattgcaatgaagagcgtgcggggccgggaagagagtgaggtgacctccatc accgtgcacacagccatggatgcccccctgggggtcacagccaccaatatcacccccaca gaggtactgctgcagtggaacccaccactgtcagacgtggagagctacgtccttgtcctc acccgccgtgcaggagaaaccattcttgtggatggagtcagccaggagtaccagctgacc aacctcctgcccagcaccacgtacacagtctccatgtatgccaccaatgggcctctcacc agccagaccatcagcaccaacttcacaactcttttggatcctcccacaaatctgactgcc agtgaagtcactcgacggagtgccctgctttcctgggtgcctcccctgggagagatggag aactacatcatgacctacagaaccagcgatggcagctggaaggagctgatagtggatgct gaggacacttggatccggctggaggggctttctgagactacagagtacactgtgcgcctg caagctgcccagaacaccatgaggagtggcttcatctccaccaccttcaccacaggtggt cgtgtctttgctaaccctcaggactgtgcccagcacctgatgaatggagacacattgagt ggcgtctacaccatctccatcaacggggacctgagccagcgggtgcaggtctactgtgac atgaccactgatggaggtggctggattgtcttccagaggcggcagaacgggctgactgat ttcttccggaaatgggcagattaccgagttggctttggaaacttggaggatgagttttgg ctgggcttggacaacatccacaagatcacatcccagggacgctacgagttgagaatagac atgagggacggccaggaagcggcgtacgcctactacgacaagttctccatcggcgactcc cgcagcctgtacaagctacgaatcggggactacaatggcacttcaggggattctctcacc taccaccagggccgccccttctccaccaaggacagggacaacgacgtcgctgtgaccaac tgtgccatgtcctacaaaggggcctggtggtacaagaactgccaccgcaccaacctcaac ggcaagtacggagagtcccggcacagtcaggggatcaactggtaccattggaaaggccac gagttctccatcccctttgtggaaatgaagatgcgaccttacaaccaccgtaacatctct gggaggaagcgacggtccctacagctctga

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