Dryobates pubescens (Downy woodpecker): 104303503
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Entry
104303503 CDS
T08526
Symbol
VCPIP1
Name
(RefSeq) deubiquitinating protein VCIP135
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dpub01002
]
104303503 (VCPIP1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpub04121
]
104303503 (VCPIP1)
Enzymes [BR:
dpub01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104303503 (VCPIP1)
Peptidases and inhibitors [BR:
dpub01002
]
Cysteine peptidases
Family C64
104303503 (VCPIP1)
Ubiquitin system [BR:
dpub04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
104303503 (VCPIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
Motif
Other DBs
NCBI-GeneID:
104303503
NCBI-ProteinID:
XP_009902438
LinkDB
All DBs
Position
Unknown
AA seq
1148 aa
AA seq
DB search
MTRQRHEQRQLLAVEEGTDPDLVLHNLLRNALMGVSGAGPPRRNTELVKVMGLSNYHCKL
LAPILARYGMDKQTGKAKLLTEMNQGDIFDCSLLGDRAFLIEPEHVETIGYGKDRSGSLI
YLHDTLEDIKKANNSQECLIPVHVDGDGHCLVHAVSRALVGRELFWHALRENLKKHFEEN
LSHYKALFHDFIDAAEWEDIINECDPLFVPPEGVPMGLRNIHIFGLANVLHRPIILLDSL
SGMRSSGDYSATFLPGLIPLEKCMGKDGMLNKPICIAWSSSGRNHYIPLVGIKGAALPKL
PRKLLPKAWGVPQDLIKKYIKLEEDGGCVIGGDRSLQDKYLMRLVAAMEEVFMSKHGIHP
SLVADVHQYFYRRTGVIGVQPEEVTAAAKKAVMDNRLHRCLICGALSEHHVPPEWLAPGG
KLYNLAKSTHGQLRPDKNYSFPLNSLVCSYNPSKDVLVPDYSLSSLTACNWCHGNLVRRV
REDGSVSYLDGDRTNTRSAGGKCGCGFKHYWEGKEYDNLPEAFPITLEWGGRVVRETVYW
FQYESDASLNSNVYDVAMKLVTKHFPGEFGSEILVQKVVNTILHQTAKKNPDDYTPVNID
GAHAQRAADVQQGQEPEAQLPTKIILTGQKTKTLHKEELNMSKTERTIQQNIADQASVMQ
KRKSEKMKQEHKGQPRTASPGAVREGPSSAPATPTKTPYSPTSAKENKIRITTSDGRQSM
LTLKRTTTFLELQESIAREFNIPPYLQCIRYGFPPKELLPPKEGMESEPVPLQHGDRVAI
EILKGKEEGRQPAAAHSAHVVKHEDVALTSKISSKELQEQVDKEMYSLCLLATLMGEDVW
SYAKGLPQLFQQGGVFYSIMKKTTGLADGKHCTFPHLPGKNFVYNAAEDRLELCVDAAGH
FPIGPDVEELVKKALSQVRAEAASRSREASPSHGMLKLGSGGVVKKKSEQLHNITAFQGK
GHSLGTASSSQQHDPRARETPLLRKHSTETDFSPAKAEPSAFPAAAASSELIRMAPGVVT
MRDSRQLDPTLVEAQRKKLQEMVSSIQASMDRHLRDQNAEQSASAELSQRKAEAASSAAK
TGSFQAASLPGGPQHLNSAAAEGSAVNSVGTTFRARAKAHKGSSVEELEEMESQDAGIAN
ATEPMDHS
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgaccaggcagcgccacgagcagcggcagctgctggccgtggaggaggggacggacccc
gacctggtgctgcacaacctgctgcggaacgcgctgatgggcgtcagcggggccggcccg
ccccgcaggaacacggagctcgtcaaagtcatgggcctctccaactaccactgcaagctc
ctggcccccatcctggcccgctacggcatggacaagcaaactggcaaagccaagctcctg
acggagatgaaccagggagacatctttgactgctcgctcctgggtgaccgcgccttcctc
atcgagcccgagcacgtcgaaaccatcggttacggcaaggaccgctccggcagcctcatc
tacctgcacgacaccctggaagacatcaagaaggccaacaacagccaggagtgcctcatc
cctgtgcatgtggatggagatggccactgcctggtgcacgcggtctcgcgggcgctggtc
ggcagggagctgttctggcacgctctgcgagagaatctcaagaagcattttgaggagaac
ctgagtcactataaagcccttttccatgactttattgatgcagccgagtgggaggacatt
atcaatgaatgtgacccgctgtttgttcctccagaaggtgtgccaatgggccttaggaat
attcacatctttggcctggccaacgtgctccacaggcctatcatcctgttggactccttg
agtggaatgcgaagttctggggattattcagccaccttcctccctggtctgatacctcta
gaaaagtgcatgggcaaggatggcatgttgaacaagcccatctgcatcgcctggagtagc
tcaggacgtaaccattatattcctctagttggaataaaaggtgctgctttacctaaactg
cctaggaagctacttcctaaagcctggggagttcctcaagacctcatcaaaaagtacatc
aagttagaggaggacggtggttgtgttattggaggagacagaagcttgcaagacaagtac
ttgatgaggctggttgctgcaatggaggaggttttcatgagcaagcacgggatccatccc
agtctcgtagctgatgtacatcagtatttctacagaaggactggtgtgataggagtccag
cctgaagaagtcactgcagctgccaaaaaagcagtgatggacaaccgccttcacaggtgc
ctcatctgtggggctctttcggagcaccacgtccccccggagtggctggctcctgggggg
aaactctataacctggccaaaagcacccacggccagctaaggcctgacaaaaactacagc
tttcccttgaacagtttggtgtgctcttacaacccctcaaaggacgtgctggtaccggac
tatagcctgagcagtttgactgcctgtaactggtgccacggtaacctggtgcggcgcgtc
agggaggatggatctgtttcctatttggatggagaccgaactaacaccaggtctgcgggt
ggcaagtgtggctgtgggttcaagcactactgggaaggtaaagagtatgataatctccct
gaagctttccctattactctagagtggggaggaagagtggtgagagagacggtctactgg
ttccagtatgaaagcgacgcgtccctgaacagcaacgtctacgacgtggccatgaagctg
gttaccaagcacttccctggtgagtttggcagtgagatccttgtccaaaaagttgtcaac
acaatattgcatcaaactgccaaaaagaaccccgacgattacacccctgtaaatatcgat
ggtgctcacgcccaaagagctgctgatgtacagcagggacaggagccggaggcccagctc
ccaaccaaaattattctgactggacagaagacaaaaactttgcacaaggaggagttgaat
atgagcaaaactgaaagaactattcagcagaacatcgcagaccaggcttctgtcatgcaa
aaacggaagagtgaaaaaatgaaacaggagcataaagggcaacccaggactgcttctccc
ggggctgtgcgtgaggggccctcctctgcacctgccacccccaccaagactccctattcc
ccaacctctgccaaggagaacaagatccggatcaccacgagcgacgggaggcagtccatg
ctcaccctcaagcgcaccaccaccttcctggagctgcaggagagcatagccagggagttc
aacattcccccctatctgcagtgtatccgctacggctttcctcccaaggagctgctgccc
cccaaagagggcatggagagcgagcctgtgcccttgcagcacggcgacagagtggcgatc
gaaatcctgaaaggtaaggaggagggccggcagcctgctgcagcgcactcagcccacgtt
gtgaagcatgaggacgtcgccctgaccagtaaaatctcatccaaggagctgcaggagcaa
gtggataaggagatgtattccctctgccttctagcaacactcatgggagaagatgtttgg
tcttacgcaaaggggcttcctcagctctttcagcagggtggagtgttctacagcataatg
aagaaaaccacaggtctggctgatggcaaacactgcactttcccacatctgcctggtaaa
aactttgtgtacaacgcagcagaagacaggctagagctgtgtgtggatgctgctgggcac
ttccccatcggccctgatgtcgaagagttggttaaaaaggccttaagtcaagtgagagca
gaagctgcttcaagaagcagggaagcgagtccctcacatggaatgctgaagctgggcagt
gggggagtggtgaaaaagaaatctgagcaactgcacaacataactgcatttcaggggaag
ggccattcccttgggaccgcctccagtagccaacagcacgatccgagagccagggaaaca
ccacttctgcgaaagcacagcacagaaacggacttcagtcctgctaaagcggagccttcc
gcgttcccagctgctgctgctagcagtgagctgatccgcatggcgccgggggtcgtgacc
atgagggacagcaggcagctcgaccccactctggttgaggcgcagaggaaaaagctgcag
gagatggtctcctctattcaggcttcgatggacagacatctgcgggatcagaatgcagag
cagtcagcatcagctgagctctcccaaaggaaagcagaggcagcgagttcagctgctaaa
actgggagcttccaggctgcctctctgccgggcggcccccagcacttgaacagcgccgcc
gccgagggcagcgcggtgaattctgtggggaccacgttccgtgcaagggctaaagcacac
aagggaagttctgttgaggagcttgaggagatggagagtcaagatgcaggaatcgccaat
gcaactgagccaatggatcactcttga
DBGET
integrated database retrieval system
