Dryobates pubescens (Downy woodpecker): 104303524 Help Entry 104303524         CDS       T08526                                  Symbol RP1 Name (RefSeq) oxygen-regulated protein 1   KO K19538   retinitis pigmentosa 1 Organism dpub  Dryobates pubescens (Downy woodpecker) Brite KEGG Orthology (KO) [BR:dpub00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:dpub03037]     104303524 (RP1)    04812 Cytoskeleton proteins [BR:dpub04812]     104303524 (RP1) Cilium and associated proteins [BR:dpub03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    104303524 (RP1) Cytoskeleton proteins [BR:dpub04812]  Eukaryotic cytoskeleton proteins   Microtubules    Tubulin-binding proteins     Microtubule-associated proteins (MAPs)      104303524 (RP1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DCX DCX2_DCDC1 Motif Other DBs NCBI-GeneID:  104303524 NCBI-ProteinID:  XP_009902460 LinkDB All DBs Position Unknown AA seq 2111 aa AA seqDB search MSETPSTSYSVNQPNSSESEQSLAPRHLNVTEPVVAKRICFYKSGDPQFNGIKMVVNNRS YKTFDALLDSLSKRVPLPFGVRNISTPKGRHSITNLEDLEDGKSYICSHQRRMKPINLEQ ASRKPLPWQISRPVSARRRAVQLARGNEDAYGHREIRITTPKKMLVFKNGDVRLRRTVVL GKKNTQTFEAFLDYMSELMQYPVAKLYTTDGRKVPNLQALILCSGAVVAAGREPFKPSNY DSLGYSRPAKLLGIANRVYPKANAKSESENTRAEVGSSSRSQIFSTSSDKGSSNDNNSND NISDSSCVPGSHNGIVENSIVTDQDLSVAQYEDDIEKSVHLNQDGSITVEMKVRLKIKEE ETIKWTTTVSRAGLSGDKNAAACSSEVCASHENVSECINPKDTPFLKSYKEEEGDSLQQF NTEVSDKDSEPDLKTAGCTRDNSADLDVSSVAEDDTKPRFYRPPTPGPRRVRQKKALVES VTLVSEQEVQEKTIGQFSYSEEIQDGENKSEYCMVAHSSRKKSSVINPKSGETSESDLFK LSSDNMKEEVLFKVSHRSSDLLETTNRKRLEVPDEDELVENIVDRSVMEQGTYNSLVSAC KANIRGFIPSSKIYQAARPVSADCSQGSCGIKQIKRSLSSFIRYSEFHQSKEEIKCSAGD LLPVSQDAEHSASAGHSQMKTMVSPCSEAPTEKINPTTGFCPAVTESENQVSVSNESVVT THLIDDSQSASSLTKKKKKRKPSNLHEQGAPENHRGKDISVTVKSEGRYTSKATQDSTGE PLDKSSEIPQEEGRELFVKNESVHSDTRMCPEDESVEQNGLSSKKATSSNNKKPAKVKSK SGKKKSIGSSAKSEDGLMMVDSNNESQHSQDTLSTEKPGTHPTNSSFEQRHNSSVISKPL SEVPKNLNSEKVKEDNILSSKKEKKQKKMKKNLSKDANKLNMPERPITVEALKQKDFQSE HSLENYVQSWLKNVLPNSVLPPIKQRERNVENNDDCDVPNENADKETKLVTHEVHVVERN LSKKKLKPICELKTLEDSAKDSGENQTDSLVHANATVVEEAKYTLKSELHHDGKLQLFHE TQGNEKKISEADIRDTNLGQRKKSEVAVQVDYTIVNEKMGIDVQNNCMSTMMLHELQSAL LGLQKDHNGCIGKACGLSDLSPAAFGCSSNVLLAWLLVLNLRENLIGTVKDDLQKTTCSC SEIFTQLQFLKQTTVIEKVDELKAAFSHFQQSTENNLLHFGRELKKQNCTHCCENMPITE IPNGVHQHGNENSEEPRVTKDNVNSEDTSNLTGEIENSFDAEKDLCRETEILDLSVPKAQ LDDQDASASSNTCSLASAIEPPERNEEMSDSLDKKSQDQDTDTSFANEESETSIEPNSTV HSVISNDKSCCALDQDTSELEGERGIVHVATDKSEDERADPKSAGNAKTPNDQLELVTET SAECNNEDYSVQEDKEYAETCEETSERLSTVSPLSFCYESKQITECDMSEGEQNLHVEEV ENEPRSDASQLKKCLKSPATSDWSDYRPDSEETDYNMRASSDLTNESEDEAEIAKHYNTG YVKRTIERLYGKAEASFKPEFHKGFPYLSQVFQKDSEEFRSAVMEKTISFSQEPPPSVEQ LSHSSLPSQEFPLNLSKGGTVSRGENTSLPTPQPTPDREEAIYTDDCSGLSPKQHCQPSV QINEDEGILIDKGKWLLKENHLIRRSPPERTGMYGNLDTTSADTVLDANGDDVPYSHFGN LNQYPVFNEISSSELEEMAKPSENLCNYFNIPHNSDSDPFQDDLSAKSKPSRSDKVAPLP AASKEKNKPSAMVGSTSPQADTNYPAFTSVEFKLPDNKVHPLEQPLDDEPVQSQPAAASN TNRNALREEDSLDKLHAICGQHCPILMVTVTPINEEQRGYAYQKASDIENQLGQCLLGKK SGHLQWSGEDFTADENNLVALKSNRINKIANNIFNRFYANNTLDFISNFGVLASSTLKDA SSSWKLHVVEDVNVKPGTVSNCQNNASEHILGDLVIGTNSELPNRKPKICQTLRISLIRI VGEKFSPVLVDPAETCHSETFLKGDTSLNNTEHNASENLRNGNAFPEEEEEEEGICFGTM DNGNSKDEKDL NT seq 6336 nt NT seq  +upstreamnt  +downstreamnt atgagtgaaacaccttcaaccagttactctgtgaatcagcccaactcctctgagagtgag cagagcttagctccgcgccatctcaatgtcacggagcctgtggtggccaaacggatctgt ttctataagagtggagatccccagttcaatgggatcaagatggtggttaataacaggtct tacaaaacatttgatgccttgctggacagtttatccaagcgggtccccttgccttttgga gtgaggaatatcagcacaccgaaaggcaggcacagcattaccaatctggaggatctcgag gatggaaaatcttatatttgctcccaccagaggagaatgaagcccatcaacctggaacaa gccagcagaaagcccctgccctggcagatcagcaggcctgtcagcgctcggcgtcgagcc gtgcagttagcaagggggaatgaggatgcatatggccaccgggagatcaggataaccact cccaaaaagatgcttgtcttcaaaaacggggatgtaaggctcaggaggactgtagttctg gggaagaagaatacacaaacctttgaggcctttctggattacatgagtgagttaatgcag tatccggttgcaaagctgtacaccaccgatggcagaaaggttcctaatcttcaggccctg atactgtgctccggagctgtagtcgcagcgggaagagagccttttaaaccaagcaattac gactctctcgggtattcacggcctgctaaattgcttggaattgcaaatcgtgtatacccc aaagcaaatgccaagtcagaaagtgaaaatacaagagctgaagtgggctctagctcaaga tctcagatattctcaacctcttctgataaagggtccagcaatgataacaactcaaacgat aacatctcagattcttcctgcgttcctggcagtcataatggtatagtggaaaatagcata gttactgatcaagacttgtctgtggcacaatatgaagatgacattgagaaatctgttcac ctcaatcaagatggcagcatcacagtggaaatgaaagttagattaaaaattaaagaggaa gaaaccattaaatggacaaccactgtgagtcgtgctggcctctccggtgacaaaaatgcc gccgcttgcagttctgaagtgtgcgcgtcccatgaaaacgtatcagagtgtataaaccca aaggatactccatttctgaagagctacaaggaagaagagggagactctctacagcaattc aacacagaagtgtcagacaaagactcagagcctgatttaaaaactgctggttgtacaagg gataattctgcagacctagatgtaagcagtgtagctgaggatgataccaagcctcgcttt tacaggccccccacccctgggccaaggcgtgttagacaaaagaaagcactagttgaaagt gtcaccttggtatctgagcaggaggttcaggagaagacaataggacagttttcctacagt gaggaaatacaggatggagaaaataaatctgagtattgcatggtagctcattcaagcagg aagaaatcaagtgtcattaatccaaagtccggtgagacgagcgagagtgatttgttcaag ctgtcttcagataatatgaaagaagaagtgctttttaaagtaagccacagaagtagtgat ttactagaaaccacaaacaggaagagattagaagtgcctgatgaggatgaattagtggag aatatagtagataggtcggtgatggaacaaggtacctacaatagtttggtgtcagcctgc aaagctaacatcaggggtttcatcccatcatcaaaaatttaccaggcagctaggccagtt tcagcagactgcagccaggggtcgtgtggtattaaacaaataaaaagatcactgagttct ttcattagatactcagaatttcatcagtcaaaagaagaaataaaatgcagtgctggtgat ttattacctgtttctcaagatgcagagcattcagcctctgctggacacagccagatgaag acgatggtatctccatgcagtgaagctcctactgagaaaataaatccaacaactggattc tgtcctgctgttactgaaagtgagaaccaagtcagtgtcagtaatgaatctgtggtgaca acacatctcattgatgacagccaatctgcatcttccctcactaaaaagaagaaaaagaga aaaccatctaaccttcatgagcagggtgcacctgaaaatcacagaggtaaagacatttca gtgacagttaaaagtgagggaaggtacacaagcaaagccacacaggattcaacaggagag cctctggataagtcttctgaaatacctcaggaagaaggaagagaactgtttgtgaaaaat gagtctgtccattcagacacaaggatgtgtcctgaagatgagtcagtggaacaaaatgga ttatcatctaaaaaagccacaagcagtaataacaaaaagccagccaaggtaaaatccaag tcaggcaaaaaaaaaagtattggttcatccgcaaagagtgaagatggtctaatgatggtt gattcaaacaatgaatctcaacacagtcaggatactctgagtactgagaaaccaggcaca catcccacaaacagttcttttgagcagagacataactcatcagtgatttcaaagccactg tcagaagtgccaaagaatcttaactctgaaaaagtaaaggaagacaatattttgtcatct aagaaagagaaaaagcaaaagaagatgaagaaaaacctaagtaaagatgcaaataagtta aatatgccagagaggcccattacagtagaggctttaaaacagaaggattttcaaagtgag cattcacttgaaaactatgtccaaagttggctgaaaaatgtgttaccaaattctgtcttg ccccctattaaacaaagagaaaggaatgtagagaacaacgatgactgtgatgttcctaat gaaaatgctgacaaagaaaccaagctggttactcatgaagtccatgtagtggaacgtaat ctgagcaaaaaaaaattaaagcccatttgcgaattgaaaactttagaagactcagccaaa gattcaggtgaaaaccagactgactctttggttcacgctaatgcaactgtagtagaagaa gccaagtacactctaaagtcagaacttcatcatgatggtaaactacagctctttcatgag acacagggcaatgagaaaaagatctcagaagcggatattcgagatacaaacctaggtcaa agaaaaaaatctgaagttgctgttcaagtggattacacaattgtcaatgagaaaatggga attgatgttcagaataactgtatgtctaccatgatgctgcacgagctacagtcagctttg cttggcctccagaaagaccataatgggtgtataggaaaagcttgtggcctttcagatctt tctcctgcagcttttggttgttcctccaatgtcctcctagcttggctgcttgttctgaat ttgagagagaatttgattgggacagttaaagatgatctacaaaaaactacctgtagctgt tctgaaatatttacacagttacagtttctgaaacaaactacagtcatagaaaaagttgat gagctgaaggctgccttctcacattttcaacaatcaacagaaaataacttactacacttt gggagggagcttaaaaagcagaactgcacacattgctgtgagaatatgcccataactgaa attcctaatggtgtacaccagcatggaaatgaaaactcagaggagcctcgtgttacaaag gacaatgtaaattctgaggacacttcgaatttgactggggaaatagaaaactcttttgat gcagagaaagacctttgtagagaaacagagattttagatttgagtgttcccaaagcacag ctagatgaccaagatgccagtgctagttcaaatacctgtagccttgcatcagctatagaa ccacctgaaagaaatgaagagatgtctgatagcctggataaaaaatctcaagatcaagac actgatacatcatttgctaatgaagagtcagaaacttccatagaaccaaactcgacagtt catagtgtaatttctaatgataagagttgttgtgctctagatcaggatacctctgagtta gaaggtgaaagaggtattgtacatgttgccactgataaaagtgaagatgagagagctgat ccaaagtcagcaggtaatgccaaaaccccaaatgaccaacttgagctagttactgaaacc tctgcagaatgtaacaatgaggattattccgtacaggaagacaaggaatatgcagaaact tgtgaggagacatctgagaggttatctacagtttctccactatcattttgttatgaatca aagcaaattacagaatgtgatatgagtgaaggagaacagaatttgcacgtagaagaagtg gagaatgaaccgcgttcagatgcctcccagttaaaaaaatgccttaaaagtcctgctact tcagactggtcagattacaggccagatagtgaggagactgattataacatgagagcatcc agtgatttaaccaatgaaagtgaggatgaagcagaaattgcaaaacattataatactggc tatgtcaaaagaacgattgaacggctttatggcaaggcggaagcttcgttcaagcctgaa tttcacaaaggatttccttatttgtctcaagtatttcaaaaagacagtgaagaatttcgc tctgcagtaatggaaaaaaccatttctttttctcaagagcctccaccatctgtagagcaa ttgtcccattcttcactaccatcacaagaatttcccttaaacttaagcaaaggtggcact gtatcgagaggagaaaatacttctttaccaacaccacaacctacccctgacagagaagag gcaatttacactgatgactgttcagggctatctccaaagcaacattgtcaacctagtgta caaattaatgaagatgaaggaatattgatagataaaggcaaatggcttctcaaagaaaat cacttgataagaaggtcaccccctgagcggactgggatgtatggcaatttagatacaacc tcagcagacaccgtcctggatgctaatggtgacgatgttccgtactcacactttggcaat ctgaatcagtacccagtcttcaatgaaatctcttcttcagaacttgaagagatggctaaa ccctctgaaaatctttgcaactacttcaatatacctcataacagtgactcagaccccttt caggatgacttgagtgcaaaaagcaaacctagccgcagtgataaggtcgctccccttcct gcagcaagcaaagagaagaataagccatcagccatggtaggttctacttccccacaggct gataccaattatccagcctttacatctgtagaatttaaattgcctgataacaaagtgcat ccattggaacagcctttagatgatgaacctgtacagtctcagccagctgctgctagtaac actaacagaaacgctcttcgggaagaagattctctggataaactccatgcaatatgtggc caacattgtccaatactaatggtgacagtaacaccaattaatgaggaacagagaggatat gcctaccaaaaggcatctgatatcgagaaccagctgggtcagtgtttgttgggcaaaaag agtgggcatttgcaatggtcaggtgaagatttcacagcagatgaaaataaccttgtggct ctgaagagtaaccgtatcaataagattgccaataacatttttaataggttttatgctaat aacaccttagacttcattagtaactttggagtgcttgcatcttcaactctgaaagatgca agcagttcatggaagctacacgttgtagaggatgtgaacgtgaaacctgggacagtcagc aactgtcaaaacaatgcatctgagcacatactcggtgatcttgtgataggcactaatagt gagctacccaacagaaagccaaaaatctgccaaactctaagaataagcttaattcgtatt gttggagaaaaattctctccagtgttggtggatccagcagagacctgtcattctgaaaca ttcctgaagggtgacacgtctttaaataacactgaacataatgcctctgaaaatctgaga aatggcaatgcctttcctgaagaagaagaagaagaagaaggaatctgctttggtacgatg gacaatggaaacagtaaagatgagaaagacttgtaa

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