KEGG   Dryobates pubescens (Downy woodpecker): 104304101
Entry
104304101         CDS       T08526                                 
Symbol
COPB2
Name
(RefSeq) coatomer subunit beta'
  KO
K17302  coatomer subunit beta'
Organism
dpub  Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:dpub00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dpub04131]
    104304101 (COPB2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dpub04147]
    104304101 (COPB2)
Membrane trafficking [BR:dpub04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    104304101 (COPB2)
Exosome [BR:dpub04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   104304101 (COPB2)
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR75_1st EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st NBCH_WD40 ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_SCAP PEP5_VPS11_N Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_SPT8 WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_LRRK2 Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 104304101
NCBI-ProteinID: XP_009903111
LinkDB
Position
Unknown
AA seq 865 aa
MLFSDLGPEPVGPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTL
VKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHP
TQPFILTSSDDMLIKLWDWDKKWACSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKV
WQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHA
QNVSCVSFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALG
YDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMG
SCEIYPQTIQHNPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESN
SVVKIFKNFKEKKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIF
WSDSGELVCIATEESFFILKYLSEKVAAAQETHEGVTEDGIEDAFEVLGEIQEIVRTGLW
VGDCFIYTSSVNRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLV
SVLEYQTAVMRRDFGMADKVLPTIPREQRTRVAHFLEKQGFKQQALAVSTDPEHRFELAL
QLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQECLQHAQDYGGLLLLATTSGNA
NMVNKLAEGAEKDGKNNVAFMSYFLQGKLDSCLELLIKTGRLPEAAFLARTYLPSQVSRV
VKLWRENLSKVNQKAAESLADPTEYENLFPGLKEAFVAEEYVKQSLADLRPAREYPLVTP
NEERNLLEEAKGFEPSGVMAPQKQG
NT seq 2598 nt   +upstreamnt  +downstreamnt
atgttattcagtgatttaggacctgaacctgttgggcctctccgacttgatataaaacgg
aaactaacagcacggtctgaccgggtgaagagtgtggacttgcatcccacggagccatgg
atgctggctagcctttacaatggcagcgtctgtgtttggaaccatgaaacacagactctg
gtgaagacttttgaagtgtgtgacctgccagtgagagctgccaaattcgtggcaaggaag
aactgggttgttacaggagctgatgacatgcaaatcagagtttttaattataacaccttg
gaaagagttcacatgtttgaagcacattcagattacattcgttgtattgctgtgcatccc
acacagcctttcatactgacaagcagcgatgacatgctcattaaactctgggactgggat
aaaaaatgggcttgttctcaggtgtttgaaggacacacccattatgtcatgcaaattgtc
ataaacccaaaagacaataatcagtttgccagtgcctctttggataggacaatcaaggtg
tggcagcttggctcctcgtcacccaactttactttggaaggccatgagaaaggagtaaac
tgcattgactattacagtggaggggacaagccctatctcatttcaggtgcagatgaccga
ttggttaagatctgggactaccagaataaaacgtgtgtacaaacactagaaggacatgct
caaaatgtgtcttgtgtcagcttccaccctgaattgcctatcattatcacaggatctgaa
gatggaactgtacgcatttggcattcaagcacttaccgcctggaaagtaccctcaactat
ggcatggagagggtgtggtgtgtggccagtttaagaggatccaacaatgtggctttggga
tatgatgaaggcagcattattgttaagcttggtcgtgaagagcctgccatgtccatggac
gcaaatggaaaaatcatttgggctaagcattcagaggtccaacaggctaacttgaaagct
atgggagatgctgaaatcaaagatggagagagattgccgctggcagtaaaggatatgggg
agctgtgaaatctatcctcagacaattcagcacaatcctaatggacggtttgtagtggtg
tgtggtgatggtgaatacatcatctacacagctatggctctgagaaacaagagctttggc
tctgcacaggagtttgtatgggcacatgattcttcagaatatgcgatcagggagagcaac
agtgttgtaaagatcttcaaaaatttcaaagagaagaagtccttcaaacctgattttgga
gcagaaggtatttatggtggcttcctgttgggagtcagatctgtcaatggtttggcattt
tatgattgggaaaacacagaactgattcgcagaattgaaattcaacccaagcacattttc
tggtctgactcgggtgagcttgtctgcattgctacagaagagtcattcttcattctgaaa
tacctgtcagaaaaagttgcagcagcccaagaaacacatgagggtgtcactgaagatgga
attgaagatgcttttgaggttctgggtgagattcaggagattgtgagaacgggcttgtgg
gtaggtgactgctttatttacaccagttctgtgaacagactcaactactatgttggcgga
gaaattgtcaccattgcccacttagacaggacaatgtatcttttgggatatatccctaag
gacaaccgactttatttgggtgataaagagctgaacattgttagctattcattgctcgtc
tcagtgcttgaatatcaaactgccgtgatgaggagagattttggtatggctgacaaagtt
cttcccaccattccaagagaacagagaaccagagttgcacattttcttgaaaaacagggc
ttcaaacaacaagctcttgcagtatctacagatccagagcatcgctttgaacttgctctt
caacttggagaattaaaaatagcctatcagcttgcagtggaagcagagtctgaacagaaa
tggaagcaacttgctgagcttgccattagtaaatgccagtttggcttagcccaagagtgt
ctccaacacgcacaagactatggaggactgctgctcctggctacaacttctggaaatgct
aacatggtcaataagttagccgaaggggcagagaaagatggcaagaacaatgttgcattt
atgagctacttcctgcagggaaagcttgattcatgtttggaactcctgattaaaactggg
cgtctcccagaagctgcttttcttgcacggacgtatttgccaagccaagtctcaagggtt
gtcaaactgtggcgggagaatctctccaaagtcaatcaaaaagctgcagaatcccttgct
gatcctacagaatatgaaaatcttttccctggactgaaagaagcttttgtggctgaagag
tacgttaaacagagccttgctgacttgcggccagccagagaataccctcttgtcactcca
aatgaagaaagaaacttacttgaagaagcaaaaggctttgagccttctggagtaatggca
cctcagaagcaaggctga

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