Dryobates pubescens (Downy woodpecker): 104304201
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Entry
104304201 CDS
T08526
Symbol
DHX15
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104304201 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpub03041
]
104304201 (DHX15)
03009 Ribosome biogenesis [BR:
dpub03009
]
104304201 (DHX15)
Enzymes [BR:
dpub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104304201 (DHX15)
Spliceosome [BR:
dpub03041
]
Complex A
U2 snRNP components
U2 related factors
104304201 (DHX15)
Complex B
104304201 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
104304201 (DHX15)
Ribosome biogenesis [BR:
dpub03009
]
Eukaryotic type
90S particles
Helicases
104304201 (DHX15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
SRP54
Cas3-like_C_2
nSTAND3
Atrophin-1
AAA_29
Flavi_DEAD
AAA_25
Motif
Other DBs
NCBI-GeneID:
104304201
NCBI-ProteinID:
XP_009903223
LinkDB
All DBs
Position
Unknown
AA seq
758 aa
AA seq
DB search
TIEVSHFLLCLLTYFRKDRDRDRDRDDRSKDRDRDRDRDRDRDRERDKEKDLRSTSNSAY
YGAAGLPAIKPAMIPHSINPFTNLPHTPRYYDILKKRLQLPVWEYKERFTDILVRHQSFV
LVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEV
GYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLK
EVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIR
TVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLPPQQQ
QRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLL
VTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKL
GIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIA
SCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQN
HESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGY
FMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEW
LVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
actattgaagtatctcattttcttctgtgtctcttgacttattttaggaaagaccgggat
cgggaccgggatcgtgatgaccgttctaaagatcgtgacagagatcgtgacagagataga
gatcgtgacagagaaagggacaaggaaaaagatttgcgctctacgtccaactccgcatat
tatggggctgctgggttaccagccataaaaccagcaatgattccacacagtattaatcct
ttcacgaatctcccccacacgccacgatactacgacatcctgaaaaaaaggctacagctt
cccgtctgggagtacaaagaaagatttacggatattttggttaggcatcagtcatttgtg
ctggttggagagactgggtctggtaaaacaacacagatccctcaatggtgtgttgactac
atgcgctcattacctggaccaaagagaggagtagcatgtacccagcctaggagagtagct
gcaatgagtgtggcacagcgggtggctgatgagatggatgtcatgctgggccaggaagtt
ggttactcaattcgatttgaagactgcagtagtgcaaaaaccattttgaagtatatgact
gatggtatgttacttcgtgaagcaatgaatgatcctttgctggagcgctatggagttata
attcttgacgaggcccatgagagaacactggctactgacattttgatgggtgttttgaag
gaagttgtaagacagaggtctgatttgaaggttatagttatgagtgccactttagatgct
ggcaagtttcagatctattttgataactgtcctcttctaactatcccgggtcgcacccat
cctgtggagatcttctacactccagaaccagaaagggactacctggaagctgccattcgt
acagtgatacaaattcacatgtgtgaagaggaagaaggagatctcttactttttcttaca
ggacaggaggagattgatgaagcctgcaagaggataaaacgtgaaattgatgatttaggc
cctgaagttggcgacatcaaaatcattccattgtattccacccttccgccgcagcagcag
caaaggatttttgaacctcccccacccaaaaaacaaaatggagcaataggaagaaaggtg
gttgtgtccacaaatattgctgagacatcattaacaatagatggtgttgtatttgtgatt
gatcctggctttgcaaaacagaaggtgtacaatcctcgtatcagagtggagtctctctta
gtgactgccattagcaaagcttccgcgcagcagcgagctggccgtgctggtcgtactaga
ccaggcaagtgcttcaggctgtatacagagaaggcttacaaaactgaaatgcaggacaac
acataccctgaaattttgaggtctaacttaggatctgtagtattgcagctcaagaagctt
ggtatagatgatttggtgcactttgattttatggatcctccagctcctgaaactctgatg
agagcattagagcttttgaattacctggctgctttaaatgatgatggagacttgactgag
ttgggatctatgatggctgaatttccattggacccacagctggctaaaatggttattgca
agttgtgactacaactgctctaatgaggtcctatcaattactgccatgttgtcagtccca
cagtgttttgttcgccccacggaagcaaagaaagcagcagatgaagccaagatgaggttt
gcccatatagatggagatcatttgacgttgctgaatgtctaccacgctttcaaacaaaat
catgagtcggttcagtggtgttatgacaacttcattaactacaggtccctgatgtctgca
gacaatgtacgccaacagctgtcacgaatcatggacagatttaatttgcctcgtagaagc
acagacttcaccagccgagactattacatcaacataagaaaggcattagttactggctat
ttcatgcaggtggcacatttggaacgaacagggcattacttaacagtaaaagataaccag
gtggtgcagttacatccctccactgttcttgaccataaaccagaatgggtgctctataat
gagtttgtccttacaacaaagaattacatccggacatgtacagacatcaagccagaatgg
ctggtgaaaattgcccctcagtactacgacatgagcaatttcccacagtgcgaagcaaag
agacagttggatcggatcattgccaaactgcagtccaaggaatactcacagtactga
DBGET
integrated database retrieval system
