Dryobates pubescens (Downy woodpecker): 104304275
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Entry
104304275 CDS
T08526
Name
(RefSeq) protocadherin beta-15-like
KO
K16494
protocadherin beta
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dpub04515
]
104304275
Cell adhesion molecules [BR:
dpub04515
]
Cadherins
Protocadherins
104304275
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
104304275
NCBI-ProteinID:
XP_009903301
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MPASREDAVRLTRRAIAWNGRRSRSSLRQVILFLLCVCVWPSGAESLRYSLAEEMERDSV
VGNIAQDLGLAPSQLAARKARVVSEGNEQLFRLNPSTGELTAKESLDREEICPQSETCML
FFTLFLDNPLQLIRGEVEVLDVNDNSPVFTKKDMVLEILETTPPRSRFPLESARDKDVGS
NGLKNYSLQSNSYFSLAVETKNDGAKYAELVLERQLDREEQQELNLLLMASDGGSPPRTG
TAQIRIVVLDANDNLPVFSREVYEVRLAENSPPGQVVVRVAATDTDEGSNGKVRYIFSQT
SDGTQQVFDLNPDTGEIRVAGKLDFEETKKHEMVVKGSDGGGLFAHCKVKVEIVDVNDNA
PEIQLTSHTASVPEDAPPRTLVALFSVRDRDAGDNGKTECTIDEDLPFTLTPTFGNFYEL
RTNAALDRETTAEYNISIRATDWGPRRLSSRQSLWVQVSDVNDNAPAFSQELYSMWVTEN
NSPMVRIGSVQASDADAGSNARVQYALVREEGEEQPAVSVSSESGDVYVVRSLDYERVRA
LEVWVSAADGGWPALSARALLRVLVRDENDNAPVVLHPGAESGAGAGELVPRWAPAGYLV
AKVVAVDADAGQNAWLSYELAKATEPGLFRLGLHSGELRTARAVAERDAPRPPLESFGLN
L
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgccggcaagccgggaggacgctgtccggcttacgcggagagcaatagcgtggaacggg
agacggagcagaagcagcctcaggcaagtgatcttgttccttctgtgcgtttgcgtgtgg
ccgagcggggccgaaagcctccgctattctctggcggaggagatggagagggactccgtt
gtgggcaatattgcccaggacctggggcttgctccgagccagctggcagctcgcaaggcg
cgcgttgtgtcggaggggaacgagcagcttttccgcctcaacccgagcaccggagagctg
acagccaaggagtccctggaccgagaggagatctgtcctcagagcgagacctgcatgctc
ttttttacgcttttcttggataatcccttgcagctgatccgaggggaggtggaggttctt
gacgtgaacgacaattccccagtgttcaccaagaaggacatggtattagagattctggaa
actacacctccaaggtctcgtttccctttagaaagtgcccgggacaaggacgtgggcagt
aatggtttgaagaactatagtctccagtccaactcgtatttctcccttgctgtagaaacg
aagaatgatggagcaaaatatgccgagcttgtcttagaacggcagcttgaccgtgaagag
cagcaggagctgaatttacttctgatggcctccgacgggggctctccaccaaggacggga
acggctcagattcgtatcgtggtattggatgccaatgacaacttgccagttttcagtcgg
gaagtctacgaggtgcgcctggcagagaacagccccccggggcaggtggtagtgagagtc
gcggccacagatactgatgaagggtccaacgggaaggtgcggtatatatttagtcaaaca
tcagacgggacgcagcaggtctttgatctgaaccctgacacaggagagattcgggtggcg
ggaaaactagactttgaggaaacgaaaaaacacgagatggtggtgaaaggcagcgacggt
ggaggactatttgctcattgcaaagtgaaggtggagatcgtggatgtgaatgacaacgcc
ccggagatacagctgacctcacacactgcctccgttcccgaggacgccccgccacgcacc
ctggtggccctcttcagcgtgcgggaccgggacgccggagacaatggcaagacagagtgc
accatcgatgaggatttgcccttcactctcacacccaccttcggcaatttctacgagctg
agaaccaacgcggcgctggacagggagacgacggcagagtataacatcagcatccgagcg
acggactggggcccgcggcgcctgagctctcggcagagcctgtgggtgcaggtgtcggac
gtgaacgacaacgcccccgccttcagccaggagctctacagcatgtgggtgacggagaac
aacagccccatggtgcgcatcggcagcgtgcaggccagcgacgcggacgcgggcagcaac
gcgcgcgtgcagtacgcgctggtgcgtgaggagggcgaggagcagccggcggtgtcggtg
agctcggagagcggcgacgtgtacgtggtgcgctcgctggactacgagcgggtgcgcgcc
ttggaggtgtgggtgagcgcggccgacggcggctggccggcgctgagcgcgcgggcgctg
ctgcgcgtgctggtgcgcgacgagaacgacaacgcgccggtggtgctgcaccctggtgcc
gagagcggcgcgggcgcgggcgagctggtgccgcgctgggcgccggcaggctacctggtg
gccaaggtggtggcggtggacgcggacgcggggcagaacgcctggctgtcctacgagctg
gccaaggccacggagccggggctcttccgcctcgggctgcacagcggcgagctgcgcacg
gcgcgggccgtggccgagcgcgacgcgccccgaccccctttagaaagcttcgggttgaac
ctctag
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