Dryobates pubescens (Downy woodpecker): 104304276
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Entry
104304276 CDS
T08526
Name
(RefSeq) protocadherin beta-15-like
KO
K16494
protocadherin beta
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dpub04515
]
104304276
Cell adhesion molecules [BR:
dpub04515
]
Cadherins
Protocadherins
104304276
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
104304276
NCBI-ProteinID:
XP_009903303
LinkDB
All DBs
Position
Unknown
AA seq
668 aa
AA seq
DB search
MAWNGRRSGGSLRNGEGRLCGQYCPGPGSLDREVICPQSETCTLFFTLFLDNPLQLFRGE
VEVLDVNDNSPVFPKKEMVLEILETTSPGSRFPLDTAQDADVGSNGLQNYSLGSNLHFSL
AVGAENDGAKYAELLLYGQLDREEQSELKLLLTATDGGSPPRSGTAQVRIVVLDANDNTP
VFSREVYEVRLAENSPLGQLVVRVAATDPDEGSNGKVQYAFTQISKGSGELFDLNPDTGE
VRVAGNLDFEETKNHKMVIRATDGGGLSAHCKVQIELVDVNDNVPEIALTSHTASIPEDA
PPRTLVALFSVRDRDTGDNGRTECTIEGDLPFTLTPTFGNFYELRTNAELDREATAEYNI
SIRATDWGPRRLSSRQSLWVQVSDVNDNAPAFSQELYSMWVTENNSPMVRIGSVQASDAD
AGSNARVQYALVREEGEEQPAVSVSSESGDVYVVRSLDYERVRALEVWVSAADGGWPALS
ARALLRVLVRDENDNAPVVLHPGAESGAGAGELVPRWAPAGYLVAKVVAVDADAGQNAWL
SYELAKATEPGLFRLGLHSGELRTARAVAERDAPRPPLVYDVCLATGTLSSDFHFLGPLL
PCFPAGMPAGTVLQRSSMCSQEVASIAEGDDRAVQVRNRSSLRAELPSVKTQIPHLPKQH
VLQAGVWS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggaacggcagacggagcggaggcagcctcagaaatggagagggacgcctttgt
gggcaatattgcccaggacctgggtctctggaccgagaggtgatctgtcctcagagcgag
acctgcacgctcttctttacgctcttcttggacaatcctttgcagctgttccgaggggag
gtggaggttcttgacgtgaacgacaactctcccgtgttccctaagaaggagatggtttta
gagattcttgaaacaacatctccagggtcacgtttccctctggacactgcccaggatgct
gacgtaggcagcaacggcttgcaaaattacagcctcggttccaatttgcatttctctctc
gcagtcggagcggagaatgatggagcaaaatacgcagagctcctcctatacgggcaactg
gaccgtgaagagcagtcggagctgaaattactcctcaccgccacggacggcggttcacca
cccagatcaggaacggctcaagtccggatcgtggtgttggatgccaatgacaacacgcca
gttttcagtcgggaagtgtatgaggtgcgcctggccgagaacagccctctggggcagctg
gtggtcagagtggcggccacggaccctgacgaagggtccaacgggaaagtgcagtacgcc
ttcacacagatttcaaagggttccggagagctctttgacctgaaccctgacacaggtgag
gttcgggtggcgggaaacctggactttgaggaaacgaaaaaccacaagatggtgataaga
gccacagacggcgggggtttgtctgcacattgcaaagtgcagattgagctggtggacgtg
aacgacaatgtcccggagatagctcttacttcacacaccgcatccattcctgaggacgct
ccgccacgcaccctggtggcactattcagtgtgagggaccgggacactggtgacaacggc
agaacggagtgcaccatcgaaggggacttacctttcactctcacccccaccttcggcaat
ttctacgagctgagaaccaacgcggagctggacagggaggcgacggcagagtataacatc
agcatccgagcgacggactggggcccgcggcgcctgagctctcggcagagcctgtgggtg
caggtgtcggacgtgaacgacaacgcccccgccttcagccaggagctctacagcatgtgg
gtgacggagaacaacagccccatggtgcgcatcggcagcgtgcaggccagcgacgcggac
gcgggcagcaacgcgcgcgtgcagtacgcgctggtgcgtgaggagggcgaggagcagccg
gcggtgtcggtgagctcggagagcggcgacgtgtacgtggtgcgctcgctggactacgag
cgggtgcgcgccttggaggtgtgggtgagcgcggccgacggcggctggccggcgctgagc
gcgcgggcgctgctgcgcgtgctggtgcgcgacgagaacgacaacgcgccggtggtgctg
caccctggtgccgagagcggcgcgggcgcgggcgagctggtgccgcgctgggcgccggca
ggctacctggtggccaaggtggtggcggtggacgcggacgcggggcagaacgcctggctg
tcctacgagctggccaaggccacggagccggggctcttccgcctcgggctgcacagcggc
gagctgcgcacggcgcgggccgtggccgagcgcgacgcgccccgacccccccttgtctac
gacgtgtgcttggccactggcaccctgagcagcgactttcacttcctcggtccgctcttg
ccgtgcttccctgccgggatgcctgccggcacggttcttcagcggagctcgatgtgctca
caagaggtggccagcatcgcggaaggggatgaccgggctgtacaggtgagaaaccggagc
tcgttgagggcagagctcccctctgtgaagacacagatcccacacctgccgaagcagcat
gtgctacaagcaggggtgtggagctaa
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