Dryobates pubescens (Downy woodpecker): 104304375
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Entry
104304375 CDS
T08526
Symbol
CTR9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpub03021
]
104304375 (CTR9)
Transcription machinery [BR:
dpub03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
104304375 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_14
TPR_8
TPR_CcmH_CycH
TPR_16
TPR_12
TPR_17
TPR_10
TPR_7
TPR_6
TPR_11
ARM_TT21_5th
TPR_Slam
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
104304375
NCBI-ProteinID:
XP_009903405
LinkDB
All DBs
Position
Unknown
AA seq
1167 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFNRDLELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYGKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVL
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRYFSYLSKVGDKMRFDLAHSATEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGEVEGSKE
KKRGGGGGRRSKKGAGEFDEFVNDDSDEDLPVSRKKKKRKGSGSEQDGEEEEGERKKKKR
RRPQKAEEGTDDEEHENGPRPKKRRPPKAEKKKAPKPERLPPSMKGKIKSKAIISSSDDS
SDEDKLKIADDGQVRNSNSDSDEGERQHSKRIVSDSDSDNRNKSGSEAGSPRRSGVHQSE
EDSDSDRSARKRRRSESEQSDNESVQSGRSRSGGSENESRPASRSADSDKDSERGSDNEG
SGRGSGNESEPEGSNDEGSEGGSDDSD
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgggggtctattgagattcctctccgggacaccgatgaggttattgagcttgac
ttcgatcagttacctgagggtgatgaagttataagtatactgaaacaggaacacacacaa
ctgcacatatggattgccttagcgctggaatactacaaacaaggaaaaacagaagacttt
gtgaagctgttggaggctgcacgcatagatggtaacttggactacagagaccatgaaaaa
gatcagatgacatgtctggatacgctggcagcatactatgtacagcaggctcgaaaagag
aagaataaagataacaagaaggagctcattactcaagctactttgctgtatactatggct
gacaaaattatcatgtatgatcagaatcacttgttgggaagagcctgcttttgtctgctt
gaaggcgataagatggatcaagctgatgcacaattccacttcgtgctcaaccagtctcca
aataatattcctgcccttcttggtaaagcatgcatttctttcaacaagaaagattataga
ggagccctggcctactacaagaaagcactgcgtaccaatccaggttgcccagctgaggtt
cgattaggtatgggccactgcttcgtgaagctgaacaagttggaaaaagctcgcttagcg
ttcaacagggatctggaactaaattcaaaatgcgtaggggctttggttggactggctgtt
ctggaactcaataataaagaggctgattccatcaagaatggtgttcagctgctctctaga
gcttacacaattgatcccagtaatcctatggtattgaatcacttggctaatcacttcttc
ttcaagaaggactatggtaaagtgcaacatttggctcttcatgctttccataacacagaa
gttgaagcaatgcaagcagagagttgttaccagctggctagatcttttcatgtacaggaa
gattacgatcaagctttccagtattattaccaggccactcagtttgcctcatcttctttt
gtacttcctttttttggattgggtcaaatgtacatttatcgaggggacaaagagaacgca
tcacaatgctttgaaaaagttttgaaagcttatcctaacaattatgagactatgaaaatc
cttggatcactttatgcggcttcagaagaccaggagaaacgggatattgcaaagggacat
ctaaagaaagtcacagaacaatatcctgatgacgtagaggcgtggattgagctagcccaa
attctagaacagactgatattcagggtgcactgtcagcctatggtacagctacacgcatt
ctgcaagagaaagtacaggctgatgtcccaccagagattttgaataatgtgggtgctctg
cacttcaggctgggaaacctaggagaagccaagaaatattttttggcatcactggatcgt
gcgaaagcagaagctgaacacgatgagcattattacaatgctatctcggtaacaacgtcc
tataaccttgccagactatatgaggcgatgtgtgaatttcatgaagcggaaaagctgtat
aaaaacattttaagagagcatcctaattacgttgattgctacttgcgcttgggagctatg
gctagggataaaggaaatttttatgaggcttctgattggtttaaggaagcacttcaaata
aatcaggatcatccagatgcttggtctctgattggcaatcttcatttggctaaacaagag
tggggtccaggacagaagaaattcgaaagaatattgaaacaaccctccacacaaaatgat
acttattccatgctggctcttggcaatgtctggttgcagactctacatcaacccacaaga
gaccgagaaaaggagaagcgtcatcaagaccgtgcattagcgatctacaagcaggtactc
agaaatgatccaaagaacttgtatgctgctaatggcataggagctgtcttggcgcataaa
ggatatttccgtgaagctcgtgatgtttttgcccaagtgagagaggcaacagcagatatc
agtgatgtgtggctgaatttggcacatatctacgtagaacagaaacagtacatcagtgct
gtgcagatgtatgaaaactgcctcagaaagttctataagcatcaaaatactgaagtattg
ttatatttggcccgtgcactcttcaaatgtggcaaattacaggaatgcaagcaaactttg
ttaaaggccaggcacgtcgcaccaagtgatacagtccttatgtttaatgtggctttagtg
ctacaaagactagctacctctgtcctgaaagatgaaaaaagcaatctcaaggaggtactt
aatgctgtgaaagaactggagctagcccacaggtacttcagttacttgagtaaagtaggt
gataagatgagatttgacttggcacactctgctacagaagccaggcaatgctctgactta
ctgagtcaagcccagtatcatgtggctcgggcgcgcaagcaggatgaagaagagagggag
ctgcgtgcaaagcaagagcaagaaaaggagctgcttcgccaaaaactacttaaagaacag
gaagagaagcgcctaagagaaaaagaagaacagaaaaaacttctggaacaaagagctcaa
tatgtggagaagacgaagaatattctgatgttcactggtgaagtagaaggatcaaaggag
aaaaaacgtggtggtggtggaggcaggcggtccaaaaaaggagcaggggaatttgatgaa
tttgtcaacgatgacagtgatgaagatctgcctgtgtctagaaagaaaaagaagaggaag
ggcagtggcagtgagcaagatggggaagaagaggagggtgagagaaagaagaagaagagg
aggagaccccagaaggcagaggaggggactgatgatgaagaacatgaaaatggtccaagg
cctaagaagcgacgtccacccaaagcagagaaaaagaaggctcccaaaccagaacgtctg
cctccttcaatgaaaggaaagatcaaatcaaaagccatcatttcgtcaagtgatgattct
tctgatgaggataaactcaaaattgccgatgatggacaggtgaggaacagcaacagtgat
tcagatgaaggagaacgacagcacagtaaacgcattgtttctgatagtgattctgataac
cgaaacaaatctggtagcgaggccggtagtccaaggaggtctggtgtccaccagtctgag
gaggattctgacagtgacaggtcagctaggaagaggaggcggtcagagtcagagcagtct
gacaatgagtctgtacagtcagggagaagtcgttctggtggttcggaaaatgaatctcgc
ccagcttctcgcagtgctgactcagacaaagactccgagagaggatctgacaacgagggt
tctggaagaggatctggtaatgaatctgaaccagaaggctcaaatgatgaggggtctgaa
ggtggctcagatgacagtgattag
DBGET
integrated database retrieval system
