Dryobates pubescens (Downy woodpecker): 104304756
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Entry
104304756 CDS
T08526
Symbol
DMXL1
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
104304756 (DMXL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpub04131
]
104304756 (DMXL1)
Membrane trafficking [BR:
dpub04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
104304756 (DMXL1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
104304756 (DMXL1)
RAVE complex
104304756 (DMXL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_IFT122_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_DCAF4
Beta-prop_RIG_2nd
CFAP251_N
Beta-prop_WDR19_2nd
Beta-prop_EIPR1
COG6_N
Beta-prop_NOL10_N
Beta-prop_EML
Beta-prop_VPS8
Beta-prop_HPS5
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
104304756
NCBI-ProteinID:
XP_009903830
LinkDB
All DBs
Position
Unknown
AA seq
2867 aa
AA seq
DB search
MKFSPDGEFFATAGKDDCLVKVWYNTDSWRSTITPPGASPEKQPKEADFSFVYLAHPRSV
NAFSWRKTSKFMPRGAVCNVLLTCCKDNVCRLWAETLLPNDSLLYGGGYNNWSEAVNFTS
NFKRNTSSKEKVQNALELNLRHFRRGRRRSGAVVAHTGYAPHQQDPHEVHRNIPPHANAL
CHFHIAASINPATDIPLLPSISSLSLGENEEKSGPFVVHWLNNKELHFTLSMEVFLQQLK
KSFEHHSPEINTEESNQIDGKSEEEVDENGDEHKGNQEKKELSDEKTTSNSSLVPLSSAI
IDHEIEVLLSEWNKNADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAF
PTGDANSLCRSIVMYACTKNVDLAIQQGKQKPSGLTRSSSMLICSGHSKSTNSLKLSIFT
PNVMMISKHADGSLNQWLVSFAEESAFSTVLSISHKSRYCGHRFHLNDLACHSVLPLLLT
TSHHNALISPDVENAKQENDSLKSRESPVRLQSRGNADVTSQDLNAVYSELILWRVDPVG
PLSFSGGVSELARINSLHVSAFSNVAWLPTLIPSYCLGTYCNSPSACFVVSDGHHLRLYQ
AVIDAKKLLCELSNPEISKYVGEVFNIVSQQSTARPGCIIELDAITELHGRKTQLLHVFQ
EDFILNNKEKEMLENNSLSDSGNQQNGFSEKFYLIVIEYTENQSLLHMWHLHLKSIPVSV
GEKIDSSTPETVMQTEEMYSSPDPDKIQSPFSQKYQACRANLQSTSWLTLSSKMVYSQEL
NLPEGVEIISVKPSAGHLSSSSIYPVCRAPYLLATSCSDGKVRFWRCRVTTESSTPPVPE
DSAHSDVTYVWEEWPLLIEGGLVSSSSAINVPGRPTEVSCAHTNRLAVAYKQVTSKPNQL
SQDFIMHVSIFECESTGGSSWVLEQTLHLDEMDTMLGAGVGIDNSSLAYNQQDISLFHSG
NTLPNTKHLVHLDWMSREDGSHILTVGIGSKLFMFGQLSGKMQEQNGKEIVSICHSGSTK
ATALTRFVMLRCVDLVSSVEGSSPFPVSLSWVRDGILVVGMDCEMHVYSQWQSPSKQELV
STDSYSGSISCINNIMKQSQSAASGLHPPKRTLTRSLTSLAQKLSGKRSACDLSTEMEDS
GLFEAAHMLSPTLPQYHPYQLLELMDLGKVRRAKAILSHLVKCIAGEVVAINESESNHDK
RLRSLTISASGSTARDPKTFSKTETTDYIEIDSVPPLPLYALLAADDDSSYLSSEKSNNQ
NSQNKKDMPNDNYDDLFQNTVISTDELVTFDADEDSSKPEVIDLSQYSPTYFGPEHAQVL
SRHLLHSSLPGLTRMEQMSLMALADTIATTSTDIGESRDRNQGGETLDECGLKFLLAVRL
HTFLTTSLPPLHRAQLLHQGLSTSHFAWAFHSVAEEELLSMLPAVQKGDPTWSELRAMGI
GWWVRNIHSLRKCIEKVAKAAFQRNNDPLDAAIFYLAMKKKAVIWGLYRSQKDTKMMQFF
GNNFTEDRWRKAALKNAFSLLGKQRFEHSAAFFLLAGHLKDAVEVCLEKLNDIQLALVIS
RLYESEFEVSSTYKSILQKRILGSAFAGKESSGNMHCDPFLRSMAYWILEDYSKALETLI
KHSVEDGGDGPPSCNPAVFNFYNYLRTHPLLLRRHFGSSYTSSTHVCLTGENGLADKINL
SERRLFFTTAYAHLKAGCPMLALEVLTKMPKVVKKSKSFHRSPSLMDASKDFSPSSPVRE
LETKDQASSYDWSQPVLNGLGSPSDCSSGKNSSSTLSFDWSQPSVVFHDEPLKLQSDSDE
SDDSEDSSLAMKDLKSLNKTEKSHETSYSYAESFSGVDDDDILSPSEDIISAQLKFRACL
KILTVELRTLSTGYEVDGGKLRYQLYQWLEREVIALQKTCDYSVEVEDLQSGISVMPEEA
MVHENTEDLADQQKNLQKRRQWLLKYQSLLRMFLSYCILHGSHGGGLASVRMELILLLQE
SQQEQSIQIPSSPLPEPSSIPLLFACTASAKTVVANPLLHLGNLTHDILHAIIDLDSPPH
PDSQNNKIYVMHTLAASLSACIYQCLCDGHSYSSFQANQFTGTVYQTVLLTQRHSSRTTS
LEETVTPNTSPAQWPGITALIRLLNSAGEEAQPGLTVLLCEILTAVYLSLFIHGLATHSS
NELYRIMAHPLNNTMWSAIFGGGAHIPSRGQQQLKTKTVSSSVDDGEKQHKHYTLSSKST
PKDSSQLPALPLVDQGSPSYKERFISPELSIWDYFIAKPFLPPQSRVEYDSEESQESGED
DEDIDGDVFAPNSHNQEHSNSNSYSWSLMRLAMVQLVLHNLKIFYPLAGHDLSELPVSSP
ICHAVLKTLQRWEQVLLRRLELYGGPPQHYISVHTSEDALAAGPALLRHKTLLEPTNTPF
RSNSHVALSVKRLWQYLVKQDEVQETFIRNIFTKKRCLNESLEEHNETMKNSMGEPHIIN
KVETDLGYPGGKARIIHKESDIITAFAVNKANRNCIAIASSHDIQELDVSSILATQIYTW
VDDDMEMENKGADDFLVIHARDDLVNVQGTTPYTHSNPGTPINMPWLGSTQTGRGASVML
KKAINNVRRMASHPTLPYYLTGAQDGSVRMFEWGHAQQITCFRSGGNSRVTRMRFNYQGN
KFGIVDADGYISLYQTNWKCCPLTGTSPKPYLTWQCHNKTANDFVFISSSSLIATAGLSS
DNRNICLWDTLVSPTNSLVHAFICHDSGATVLAYAPKHQLLISGGRKGFTGIIDLRQKQQ
QQLLQSHDSPVKAIAVDPTEEYFVTGSAEGNIKVWSLSTFSLLHTFINEHARQSLFRNIG
TGVMQIETGPANHILSCGADGTVKMRILPDRFSPLNDVLRNDVKLMI
NT seq
8604 nt
NT seq
+upstream
nt +downstream
nt
atgaagttttcaccagatggggagttttttgctactgctggaaaggatgattgtcttgtg
aaagtatggtacaatacagacagctggcggtcaaccataactccccctggtgccagtcca
gaaaaacaaccaaaggaagctgatttttcatttgtttatttggctcatcctcgatcagta
aatgcattttcatggaggaagaccagtaaattcatgccacgtggggctgtctgcaacgtt
ctcctgacttgctgtaaggataatgtttgtcgtctctgggcagagactttgttacccaat
gacagtctgttgtacggtggaggatacaacaattggagtgaagcagtgaacttcacaagt
aacttcaagagaaatacttcaagtaaggagaaagtgcaaaatgctttagagttaaatctg
aggcacttccgacgaggaaggaggaggtcaggtgctgttgttgcgcatactggatatgct
ccacatcagcaagatccacatgaagtccacaggaatatccctcctcatgcaaatgcactt
tgtcacttccatattgctgccagcatcaatccagccacagatattcctctactcccttct
atctcatctctgagtcttggtgaaaacgaagaaaaaagtggaccttttgttgtgcactgg
ctgaacaacaaagaacttcattttaccttgtctatggaagtgtttttacaacagcttaaa
aagagttttgaacatcattcgccagagattaacactgaggaatctaatcaaatagatggt
aaatcagaagaagaagttgatgaaaatggagatgagcataaaggaaaccaagaaaagaag
gagctcagtgatgagaaaactacttcaaattcaagccttgttcccttatcttctgctatt
attgatcatgaaattgaagtactactttctgaatggaataaaaacgctgacatgctattc
agtatacatcctatggatggttcactgctggtgtggcatgtggactggctagatgaatac
caacctggcatgtttcgccaggtgcaggtgtcatttgtctcaagaattcctgttgcattt
ccaacgggtgatgcaaactccctttgcagaagtatagtgatgtatgcttgtaccaaaaat
gttgacttagccattcaacaaggcaagcaaaagccttctggccttacacgatcttcatct
atgcttatctgctctggacacagtaaatcaaccaacagtttaaaactgagtatcttcaca
cctaatgttatgatgatttctaaacatgcagatgggtcattgaaccagtggctagtgagt
tttgctgaggaatctgctttttcaacagtactcagtatttcacataaatcccgatactgt
ggtcaccgttttcatcttaatgacttggcttgccactcagtattacccctgctgcttaca
acttcacatcacaatgctttaatttcaccagatgttgagaatgcaaaacaggaaaatgat
tccttgaagtctcgggagtcaccagtaagacttcagagtagaggcaatgctgatgtaaca
tcccaggatctaaatgcagtttacagtgaacttattctttggagagttgaccctgttggg
cctctgtccttttctggtggagtttctgaacttgctcggatcaattctcttcatgtttca
gcattttctaacgttgcatggctgcccacacttatacccagctactgccttggtacatac
tgtaattctccaagtgcctgctttgtggttagtgatggacaccatttgagattatatcaa
gctgtaatagatgctaagaaacttctgtgtgagctctccaatccagaaatttctaaatac
gttggcgaagtttttaacatcgtaagtcaacaatctacagctcgcccaggatgcatcatt
gaactggatgccatcacagagcttcatggcaggaaaacacagttactgcatgtttttcaa
gaagacttcattttaaataacaaggagaaggaaatgcttgaaaacaacagtttatcagac
tctggaaaccagcagaatggattctctgaaaaattctacttaatagtgatagaatatact
gaaaaccagtcattactgcatatgtggcatttacatttgaagtcaattcctgtctcagta
ggtgaaaagatagattcaagtactccagaaacagtgatgcaaacagaggaaatgtattct
tcgccagatccagacaagatccagtcacctttcagtcaaaagtatcaggcctgcagagca
aaccttcagagcaccagctggcttactctgtcttccaaaatggtgtatagtcaagagctg
aatttgccagaaggagtagagataataagtgtaaagccatcagcaggacatctgagttct
tcttccatatatcctgtttgtcgtgcaccatatctgctggctacttcatgctctgatgga
aaagtgcgattctggagatgtagggttaccactgaatcatccactcctcctgtgccagaa
gatagtgcacacagtgatgttacatatgtgtgggaagaatggccattattgattgagggt
ggacttgttagtagtagtagtgctattaatgtcccaggaaggccaactgaagttagctgt
gcacacactaatagattagcagtagcgtataagcaagtgacatctaaaccaaatcagctg
tcccaagattttataatgcatgttagtatttttgaatgtgaatctacaggaggttcttcc
tgggttctagaacagacacttcacttagatgagatggataccatgttaggtgctggtgtt
ggtattgataatagttcactggcatataaccaacaagacatttctctgtttcacagtggg
aatactctgcctaacactaagcacttggtacacttagactggatgtctagggaagatggt
tcacatattttaacagtggggattggatcaaaactttttatgtttggtcaactctctggg
aaaatgcaagaacaaaatggtaaggagattgtatctatttgtcatagtggcagtacaaaa
gctacagcccttactaggtttgttatgctgcgttgtgtcgacttggtttcctctgtagag
gggtcatctccttttccagtctcattgtcttgggtgcgtgatggcattcttgtagttgga
atggattgtgaaatgcatgtttattcccagtggcagtctccttccaagcaggaactagtt
agtactgattcttacagtggaagtatatcatgtataaataacataatgaaacaaagccag
tcagctgcttcaggtctgcacccaccaaagcgaaccttgaccagatctttgactagcctc
gcacagaagcttagtgggaagagatctgcctgtgatctgtctacagaaatggaagattct
ggactttttgaagcagctcatatgttatctcccactttacctcaatatcatccgtatcag
ctgttggaactcatggatcttggtaaagtacgtagagcaaaagccattctgtcccatctg
gtgaagtgcattgctggagaagttgttgctataaatgaatcagaatctaatcatgataag
aggctcagatccctgaccatcagtgctagtggaagtactgcaagagatcccaaaacattc
agcaaaactgagactacagactatattgaaatagactctgttccaccattgcctttgtat
gctctgcttgctgcagatgatgattcatcttacttgtcttcagagaagtctaataatcaa
aacagccaaaataagaaagatatgcccaatgacaattacgacgatctctttcaaaatact
gttataagtacagatgaacttgttacatttgatgcagatgaagacagttcaaaaccagaa
gtcattgatctttctcagtatagcccaacttactttggaccagagcatgctcaagttctt
tctcgtcacttgcttcactcaagcttgccaggtctgactaggatggagcaaatgtcactg
atggccttagcagacacgattgctactaccagtacggacattggagaaagcagagacaga
aatcagggtggagaaactcttgatgagtgtggtttgaaatttttattggctgttcggctc
cacacatttctaacaacttcacttccacctttacatcgagctcagctgcttcaccaaggc
ttatctactagtcattttgcctgggcatttcattcagtagcggaagaagaattgctgagc
atgctgcctgcagtgcagaaaggagatccaacatggtcagaactcagagctatgggtata
ggatggtgggttcggaatatccatagcctgcggaaatgcatagaaaaggtggctaaagca
gcctttcagcgaaacaatgacccacttgatgcagccattttttaccttgcaatgaaaaag
aaggctgtgatttggggattatacaggtcccagaaagatactaaaatgatgcagtttttt
ggaaacaacttcaccgaggacagatggcgtaaagcagcgttaaaaaatgcattttcattg
cttggcaaacagcgcttcgaacattctgcagcgtttttcttgttggcaggacacttaaaa
gatgcagtggaggtctgccttgaaaaacttaatgatattcagttggctcttgtaatatca
agactttatgaatcggagtttgaagtatctagtacttacaaatccatactgcagaagagg
attttgggaagtgcatttgctggaaaagaaagctctggaaacatgcactgtgaccctttt
ctgcgaagtatggcttactggattttggaagattatagcaaggctcttgagactttaatt
aaacattctgttgaagatggaggagatggcccaccaagttgtaaccctgcagtgtttaac
ttctataactacttaagaacacatcctcttctgttgaggcgacattttggctcttcttat
acatcttccacacacgtttgcttaacaggagaaaatggattagctgacaaaatcaaccta
agtgaaagacgtctgtttttcaccactgcgtatgctcatctaaaagctggttgtcctatg
ttggccttagaagtgttaacaaagatgcccaaagttgtcaagaagtcaaagtcattccat
agatcccctagtttaatggatgctagtaaagatttctcaccatcttctccagttagagaa
ttggaaacaaaagaccaagcttccagttatgattggtcacagccagtattgaacggtctg
ggttcaccttcagactgttcatcaggaaaaaattcaagttcaactctttcatttgactgg
agccagccaagtgtagtattccacgatgaacccttgaaactacagtcagacagcgatgaa
agtgatgacagtgaagattcctccctggcaatgaaagatttaaagtctctgaataagact
gaaaaatcacacgaaacaagttatagctacgcagaatctttcagtggagttgatgacgat
gatatcctaagtccctcagaagatatcatttcagcacagctgaagtttagagcatgtctg
aaaattcttactgtggagcttcgtacactgtcaactggttatgaggtagatggagggaaa
ctgaggtatcagctttatcagtggcttgaaagagaagtgatagctcttcaaaagacctgt
gattatagtgttgaagtggaagatctacagtcgggaattagtgttatgccagaggaagct
atggtgcatgaaaacactgaagatttagctgaccaacaaaaaaacctccaaaaaagacgt
cagtggcttctgaaataccagtctctcctaagaatgttcctcagttactgtatacttcat
ggctcacatggtggaggtttggcatctgtccgaatggaattaattttgctgttgcaggaa
tctcaacaggagcagtcaatacagataccttccagccctctgccagagccaagctccata
cctcttctgtttgcttgcacggctagtgccaaaacagtggtggctaatccattgctgcat
cttggtaacttaactcatgatatattacatgccataatagaccttgattcaccacctcat
ccagattcacagaacaacaagatatatgtaatgcataccttggcagcatcactctctgct
tgcatctaccaatgcctttgtgatggccacagctacagttcatttcaagcaaatcaattc
actggaacagtatatcagacagtgctattgactcagcgccattcttcaagaacaacaagt
ttagaggaaacagtgactcccaatacatcacctgcccagtggccaggaataacagctcta
atacgtctattgaattctgctggtgaggaggcccagccaggtctcacagttttactttgt
gaaattctaactgcagtctatctaagtctgttcatccacggcctagcaacacattctagc
aatgagttgtacagaattatggctcatccacttaacaacacaatgtggtctgctatcttt
ggaggaggagctcatataccaagcagaggacaacagcaattaaagacaaaaactgtttct
tcctctgtagatgatggagagaaacagcataaacattacacactttcatcaaaatccact
ccaaaagacagttctcagttgcctgcattgccattggtagaccaaggatctccatcttac
aaggaaagatttatttctcctgagcttagcatctgggattatttcattgcaaagcctttt
cttccaccgcaaagtagagtagagtatgattcagaagagagtcaggaaagtggtgaagat
gatgaagatattgatggagatgtgtttgcaccgaattcccataaccaagagcattccaat
tcaaattcgtacagttggtcactgatgagattggcaatggttcagctggtacttcacaac
ttgaagattttctaccctttggctggacatgatctttcagagcttccagttagctcccca
atatgccatgcagtcttgaaaacactacagcgctgggaacaagttcttcttcgacgtctt
gagctatatggaggtccacctcaacattacatttcagttcatacctctgaagatgcccta
gctgctggtcctgcattgcttcgccataaaactttacttgagcctacaaacactccattc
agatctaacagtcatgttgcactatctgtgaagagactctggcagtacttggttaaacag
gatgaagtccaggaaacctttatcagaaatatttttaccaagaaacgatgcctaaatgag
tcactagaggagcacaatgaaaccatgaaaaattctatgggggagccacacatcatcaat
aaggtagaaacagatctgggatacccaggaggcaaggcaagaataatccataaagagtct
gacatcattactgcttttgcagtcaataaggcgaatcggaactgcattgccatagcgtcg
agtcatgatattcaagagttagatgtttcgtcgattttagctacacagatctacacctgg
gttgatgatgacatggaaatggaaaataaaggggctgatgatttcttggttatacatgct
cgtgatgatctggtaaacgttcagggaacaactccttatactcacagtaatcccggcaca
cctatcaatatgccttggcttggcagtacacaaactggcaggggtgcatctgtgatgctc
aagaaggctattaataatgtcagaagaatggcttctcatccaacattaccatattacctg
acaggtgcgcaagatggtagtgtgagaatgtttgagtggggtcatgcgcagcaaatcaca
tgttttcggtctggtggcaactcaagggtaactcgaatgagattcaattaccaaggaaat
aagtttggaattgttgatgctgatggatatataagtttataccaaacaaattggaaatgt
tgtccacttactggaacttcacctaaaccatatttgacatggcagtgccataacaaaaca
gccaatgactttgttttcatcagttcatcatctttgatagccacagcaggattgtcttct
gacaacagaaatatttgtctttgggatactttggtttcacctacaaatagcttggtccat
gcttttatctgtcatgacagtggagcaactgtgctagcatatgctccaaaacatcagctg
ttaatatctggaggcagaaaaggctttacaggtataattgaccttcgccagaaacagcaa
caacaattactccaaagtcatgattctccagtcaaagccattgctgtcgatcctacagaa
gagtattttgtcacaggatctgctgaaggcaacataaaggtatggagtctgtctacattc
agtcttcttcacactttcatcaatgagcatgctcgacagtctctcttcagaaacattggg
acaggagtcatgcaaattgagacaggaccagcaaatcacatattgtcctgtggcgctgat
ggaacagtaaagatgagaattttgcctgatagattcagtcctttaaatgatgtgttaaga
aatgatgtgaaacttatgatctaa
DBGET
integrated database retrieval system
