Dryobates pubescens (Downy woodpecker): 104304787
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Entry
104304787 CDS
T08526
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
104304787 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpub04121
]
104304787 (RAG1)
Enzymes [BR:
dpub01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104304787 (RAG1)
Ubiquitin system [BR:
dpub04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104304787 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-RING_10
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
104304787
NCBI-ProteinID:
XP_009903863
LinkDB
All DBs
Position
Unknown
AA seq
1037 aa
AA seq
DB search
MSVASQMDLPEEILHPYSKFSDWKFKLFKVRSFEKTPSDDSQQLNKDQAEGITSSNKETI
LYEHEAVPRGEEVDLGDNRHALEKDAKDMKTQDKEAHQKNLRRLCRICGVSLKTDCYKRT
HPVHGPVDDETLLLLRKKEKKATSWPDLIAKVFKIDVRGDVDTVHPTRFCHNCWSIIHRK
FSNTPPEVYFPRNSTMEWQPHSPDCNVCHTTSHGGKRKGQLPSVQHGKRLKTTAECALTN
RGGKNPAQIKNKNVMKETVNCKNTHLSTKLLAVDYPLDFIKSISCQICDHILADPVETTC
RHLFCRTCILKCIKVMGSYCPSCWYPCFPTDLVTPVKSFLNVLHSLSIRCPVKECDEEIS
HGKYGQHLSSHKEMKDRGLYSYINKGGRPRQHLLSLTRRAQKHRLRELKRQVKAFAEKEE
GGDMRAVCMTLFLLALRARNEHKQADELEAMMQGRGSGLHPAVCLAIRVNTFLSCSQYHK
MYRTVKAVSGRQIFQPLHALRAAEKALLPGYHPFEWKPPLKNVSTNTEVGILDGLSGLPH
SVDDYPVDTIAKRFRYDAALVCALKDMEEEILEGMKAINLDDYLSGPFTVVVKESCDGMG
DVSEKHGSGPAVPEKAVRFSFTVMNIAIAQGNESKRIFEEVKPNSELCCKPLCLMLADES
DHETLTAILSPLIAEREAMKNSQLLLEMGGILRTFKFVFRGTGYDEKLVREVEGLEASGS
TYICTLCDATRLEASQNLVFHSITRSHAENLERYEMWRSNPYHESVDELRNRVKGVSAKP
FMETVPSIDALHCDIGNAAEFYRIFQMEIGEVYKNPDVSKEERKRWQLTLDKHLRKKMNL
KPMMRMSGNFARKLMCKETVEAVCELIKCEERHEALKELMDLYLKMKPVWRSSSPAKECP
ELLCQYSYNSQRFAELLATKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWASEGNES
GNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHKTLKSQGFTIDPNESLG
GTLSLEEVLESNNSEEA
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtagcctcacaaatggacctgcctgaagaaattctgcacccgtattcaaaattt
tctgactggaaattcaagttgtttaaagtgagatcatttgaaaagactccttctgatgac
agccagcaactaaacaaagatcaggcagaagggatcacttcttcaaacaaagaaaccatt
ctttatgagcatgaagcagtgccgagaggagaagaggtggatttaggggacaataggcat
gcacttgagaaggatgccaaggacatgaaaacacaagacaaggaagctcatcaaaaaaat
ctgaggcgactttgccgtatctgtggagtctccttaaaaacagattgttacaagaggact
cacccagtgcacgggccagtggatgatgaaaccctcttgcttctgagaaagaaagagaaa
aaagcaacatcttggccagaccttatcgctaaggtttttaagatcgatgtgcgaggggac
gtcgatactgtccaccccactcggttctgtcacaactgctggagtattatccacaggaaa
ttcagtaataccccacctgaagtgtactttcctaggaacagcacaatggagtggcagccc
cactctccagactgcaacgtgtgccacactaccagccacggaggcaagagaaaaggtcag
ctgcccagcgtgcaacatggaaaacgtctgaagaccactgcagaatgtgctctaaccaac
agaggtggaaagaacccagcacagatcaagaacaaaaacgtaatgaaagagactgtcaat
tgcaagaatacacatctcagcaccaagctgcttgcagtcgattatccactggatttcatt
aaatccatctcttgccagatctgtgaccatattttggcagatccggtggaaacaacatgt
agacacttgttctgcagaacttgcatccttaagtgcatcaaggtcatgggcagctattgc
ccttcctgctggtatccttgcttccctactgatctggtaaccccagtgaaatctttcctg
aatgttctccatagcctgagtataagatgtcctgtgaaggaatgtgatgaagagatctca
catggaaaatatggccaacacctctccagccacaaggagatgaaagatagagggctctac
agctacataaataaaggtggacgaccaaggcagcacctcctgtctttgaccaggagagct
cagaaacatcgtctgagagagctgaaacgccaagtcaaggcttttgctgagaaagaagag
ggtggtgatatgagggctgtgtgcatgactctgttcctgctagctttaagagcaagaaat
gaacacaaacaagcagatgaactagaggctatgatgcaggggaggggatctgggcttcac
cctgctgtctgcctggccatccgagtcaacacatttctcagctgtagccagtatcataaa
atgtatagaacagtgaaagctgtcagtgggaggcagatcttccagcccctgcatgctctg
cgtgctgctgagaaggctctcctgccagggtatcatccctttgagtggaagcctcccttg
aaaaatgtatctactaacacagaagtgggaattctagatggactctcaggattgccacac
tcagttgatgactacccagtagatacaattgcaaagagatttcgatacgatgcagcctta
gtttgtgccttaaaggacatggaggaggagatcctggaaggcatgaaagccataaatctg
gatgactatttgagtggtcccttcactgtggtagtaaaggagtcctgtgacgggatggga
gatgtcagtgagaagcatggaagcgggcctgctgtgccagagaaggcggttcgcttttct
ttcacggtcatgaacatcgccatagcgcaggggaacgaaagcaagaggatcttcgaagaa
gtaaagcccaactcagagctatgctgcaagcccttgtgccttatgctggctgatgaatcg
gatcacgaaactctgacggcaatcctgagccccctcatagcagaaagagaagctatgaaa
aacagccaactgctgcttgaaatgggaggcatcttgagaacattcaaattcgtctttagg
ggtacagggtatgatgagaaacttgtgcgtgaagtggaggggctggaagcctcaggttcc
acttacatttgtaccctgtgtgatgcaacccgcctggaggcatcccagaacttggtcttc
cactccatcaccaggagccatgctgaaaatctggagcgatatgaaatgtggaggtccaac
ccgtatcacgaatctgtcgatgagctccgcaatagggtgaagggcgtttcagccaagcct
ttcatggagacagtgccctccatagatgccttgcactgcgacatcggcaacgcggccgaa
ttctacaggatcttccagatggagattggtgaagtttacaagaatcctgatgtgtctaaa
gaggagaggaagaggtggcagttgactcttgacaaacacctcaggaagaagatgaacttg
aagcccatgatgaggatgagtggaaattttgctagaaaactcatgtgcaaagagacagtc
gaggcagtatgtgaattaatcaaatgtgaggaaaggcatgaagccctaaaagagctgatg
gacctttacctgaagatgaagccggtgtggcgatcctcgagccctgccaaggagtgtcca
gaattgctgtgccagtacagctacaattcgcagcgctttgccgagctcctagctacaaag
ttcaaatacagatatgagggcaagattaccaactatttccacaaaacccttgctcacgtt
cctgaaatcatcgaaagggacgggtccatcggggcctgggcaagtgaagggaatgagtct
ggaaacaaactcttcaggaggttccgaaaaatgaatgccagacagtccaaatgctacgag
atggaggatgtcttgaagcatcactggctctatacctccaagtacctacagaagttcatg
aatgctcacaaaacattaaaaagccagggcttcaccattgatccaaatgagagtttaggt
ggcaccttgtcactggaggaggtcttggaaagcaacaattcagaggaagcctaa
DBGET
integrated database retrieval system
