Dryobates pubescens (Downy woodpecker): 104304839
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Entry
104304839 CDS
T08526
Symbol
TAF1C
Name
(RefSeq) LOW QUALITY PROTEIN: TATA box-binding protein-associated factor RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpub03021
]
104304839 (TAF1C)
Transcription machinery [BR:
dpub03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
104304839 (TAF1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_beta-prop
HIT
TAF1C_HB
DcpS_C
Motif
Other DBs
NCBI-GeneID:
104304839
NCBI-ProteinID:
XP_009903917
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MGMLGHFFVDHPEDAFGSMGQLLHQNFFLGNSTLKVSQARNSTIRMTGLMEEISRLEARR
GCPQKRLVPRLRWFSHLCRDWLFEVPLGLLADCVHEELLLQWANLLFDDSCTGGALAWLP
PRDQCTGCLVYPGGQSMNRLYFQDVVLKELPRAQASPAQFELNGRIRQVAAARVDGEDFV
GVRSDYHCGVWRVPGRMGAAPTPLQVIRTDVPATCLTVSPHLPGELAVCTQSGAIYLWST
EMGLQRLRHDTQTMFFRDHSSWRWSDFTAHPRVLSCADRTGLQCLDARAPERCHFDLFKV
GQEAGCQQGERVVLPMYLGRAHPSQHLVTTQFSFVVDERLPMVPVLKWAHMMQDPPVFSH
LTPGGPGRSHKVLLGASRTQELLLLQYQGKRQGGSQSACQLAGPPQKLHSIAGCLQYLPT
QLPHHHHLLQQRLVAPAAGLATALQEDGPQESLLVFQLSDAGDIFYQKLTHEAVEPPAPT
VMDEATVAPGSSPLFETPTGSPLGLGSAEEEEEEQTFYLSNLEVIINEEEDEEEVGDAGT
AAAPEEPKPPQEPSATAWVRGLLLHSPRXCLVFRDVAPQAPIHFLVIPKRPIPRISRVGA
QDTELLGHLMVVAARTAQAEGLSDGYRLGINDGKHGAQSVYHLHLHVLGGRQMGWPPG
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggggatgctgggccacttctttgtggatcacccagaagatgcatttggctccatgggg
cagctgctgcaccagaacttcttcctgggcaactctacgctgaaggtcagtcaggcccgg
aacagcaccatccggatgacaggcctgatggaggaaatcagccgcctggaggctaggcgg
ggctgccctcagaagcgccttgtcccccgcttgcggtggttctcccacctctgccgtgac
tggctctttgaggtgcctctggggctgctggcagactgtgtgcatgaggagctgttgctg
cagtgggccaacctgctctttgatgacagctgcactggaggggcactggcctggctgccc
cccagggaccaatgcacaggctgcctggtgtaccccggagggcagtccatgaaccgtctc
tatttccaggatgtggtgctgaaggaactgcctcgtgcccaggcctccccagcgcagttt
gagctcaacgggcgtatccggcaagtggctgctgccagggtggatggggaagattttgtt
ggtgtccgctcagactatcactgtggtgtttggagggtgccaggtaggatgggggcagcc
cccacacccttgcaggtcatccgcactgatgtacctgccacctgtctcactgtcagccct
cacctccctggagagctggccgtctgcactcagagtggagccatctacctctggagcact
gagatggggctgcagaggctccgccatgacacccagaccatgttttttcgggaccattca
tcttggcgctggagcgacttcactgcccatccacgagtgctgagctgtgccgaccgcact
ggcctgcagtgcctggatgcccgggcccctgagagatgccacttcgacttgttcaaggtg
ggtcaggaagctggctgccagcagggtgagcgtgtggtgctgcccatgtacctgggcagg
gcccacccctcccagcatcttgtcaccacgcagttctcttttgtcgtggatgagcggctg
ccaatggtgcctgtgttgaagtgggcacacatgatgcaggacccccctgtcttttcccac
cttacaccggggggtcctgggaggagccataaggtgctgcttggagcatctcgcacccag
gagctgttactgctgcaataccagggtaagagacaggggggcagccagtctgcctgccag
ctggcagggcctcctcagaagctgcacagcatcgctggctgtttgcagtacctgcccaca
cagctcccgcaccaccaccacctgctccagcagcgccttgttgcccctgctgccgggctg
gccactgcactgcaggaggatggaccacaggagtccctactggttttccagctctctgat
gctggggacatcttctaccagaagctaactcatgaggctgtggagcctcctgctcccact
gtgatggatgaggccacagtagcccccggctcttctcctctctttgagaccccaacaggc
agcccactaggcttgggcagtgctgaagaggaggaagaagagcaaaccttctacctctcc
aacctagaggtcattatcaatgaggaagaagatgaggaggaggtgggggatgcaggtaca
gcagcagctccagaggaacccaaaccacctcaggagccctctgccaccgcatgggtgcgg
ggcttactacttcactccccccgatagtgcctggtcttccgtgatgtggctccccaagcc
cccatccacttcctggtgatccccaagcgccctatccccaggatcagccgcgtgggtgct
caggacaccgagctcctggggcacttgatggtggtggcagcacgtacggcacaggcggag
gggctgtctgatggctaccgccttgggatcaatgatgggaagcacggtgcccagtctgtc
taccacctgcacctccacgtgctgggggggcggcagatgggctggccaccaggctga
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