Dryobates pubescens (Downy woodpecker): 104305049
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Entry
104305049 CDS
T08526
Symbol
DSCAM
Name
(RefSeq) LOW QUALITY PROTEIN: Down syndrome cell adhesion molecule
KO
K06767
Down syndrome cell adhesion molecule
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dpub04515
]
104305049 (DSCAM)
Cell adhesion molecules [BR:
dpub04515
]
Immunoglobulin superfamily
DSCAM family
104305049 (DSCAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
Ig_5
C2-set_2
Pur_ac_phosph_N
Ig_4
C1-set
V-set_CD47
C2-set_3
Interfer-bind
fn3_2
ChitinaseA_N
DUF6377
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
104305049
NCBI-ProteinID:
XP_009904166
LinkDB
All DBs
Position
Unknown
AA seq
2075 aa
AA seq
DB search
MGIQAALQEEGHSKNMNSRRQSLKAKPELIRLWWNALKFHLQYAAEKARLKLFPCEQELW
VGGGQYVALELPSPVPCDSILAVVFSEDLHASLYFVNASLQEVVFASTTGTLVPCPAAGI
PPVTLRWYLATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFNNLIHDNTYYCTAENPSGKI
RSQDVHIKAVLREPYTVRVEDQKAMRGNVAVFKCIIPSSVEAYISVVSWEKDTVSLVSGS
RFLITSTGALYILDVQNEDGLYNYRCITRHRYTGETRQSNSARLFVSDPANSAPSILDGF
DHLKAMAGQQVELPCKASGHPAPKYRWLKDNIPLESDSRFRQTVEGLLIENSRPSDSGSY
VCEVWNNYGTAEMIGRLHVKQPLKATISPRKVKSSVGSQVSLSCSVTGTEDQELSWYRNG
EIINPGNNVRITGINRENLIMDGMAKSDGGAYQCFVRKDKMSAQDYVQVVLEDGTPKIIS
AFSEKVVSPGEPVSLMCNVKGTPLPTVTWTLDEDPIVKDSSHRISQIITSEGNVVSYLNI
SNTQVRDGGVYRCTANNSAGVVLYQARINVRGPASIRPMKNITAIAGRDTYIHCRVIGYP
YYSIKWYKNSNLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCNVLVQPQLSTSQSVHV
TVKVPPFIQPFEFPRFSIGQRVFIPCVVVSGDLPITITWQKDGRPIPASLGVTIDNIDFT
SSLRISNLSLMHNGNYTCIARNDAAAVEHQSQLIVRVPPRFVVQPTDQDGIYGKAVILNC
SAEGYPVPTIVWKYSKGAGVPQFQPIALNGRIQLLINGSLLIKHVLEEDSGYYLCKVSND
VGADVSKSMYLTVKIPAMITSYPNTTLATQGQKKEMSCTAHGEKPIIVRWEKEDRIINPE
MSRYLVSTKEVGDEVISTLQILPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEI
EIREVRARSIALRWTMGFDGNSLITGYDIECKNKSDSWDSVQRTKDVSPQLNQATIIDLH
PSSTYNIRMXNRIGKIEASNELTITTDEAAPDGPPQDVQLEPISSQSIRVTWKAPKKHLQ
NGIIRGYQIGYREYSAGGNFQFNIITIDTTGDSEVYTLNNLKKFTQYGMVVQACNRAGIG
PSSQEIITTTLEDVPSCPPGNVQATATSPETISISWSTLAKETLNGILQGFRVIYWANLL
DGELGEIKNVTTTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPA
GVKAAAASASTVFVSWLPPLKLNGIIRKYTVFCSHPYPTVISEFEASPDSFSYRIPNLSR
NRQYSVWVVAVTAAGRGNSSEIITVEPLAKAPARILTFSGTVTTPWMKDIVLPCKAVGDP
TPTVKWMKDSNGTPSLVMIDGRRSIFSNGSFVIRTVKAEDSGYYSCVASNNWGSDEIILN
LQVQVPPDQPRLTVSKTTSSSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSE
RSYRLETLKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKEPQFSKEQELFASINTTRVK
LNLIGWNDGGCPITSFTLEYRPFGTTVWTTAQRTSLSKSYILYDLQEATWYELQMRVCNS
AGCAEKQAKFATLNYDGSTIPPLIKSVVQSEEGLATNEGLKMLVTISCILVGVLLLFVML
LIVRRRRREQRLKRLRDAKSLAEMLMSKNTRTSDTLNKQQQTLRMHIDIPRAQLLIEERD
TMETIDDRSTVLLTDADFGETSKQKSLTVTHTVHYQSVSQATGPLVDVSDARPGTNPTTR
RSAKTGPTARNRYASQWTLNRPHPTISAHTLTTDWRLPTPRPAGSVDKESDSYSVSPSQD
TDRARSSMVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQLTAGTND
YTDSLTSSTPSESGICRFTASPPKPQDGGRVMNMAVPKAHRPGDLMHLPPYLRMDFLLNR
GVQGTSRDLGLGQACLEPQKSRTLKRPTVLEPIPMEAPSTREVQSWQPGAVATLPQREGA
ELGQAAKMSSSQESLLDSRGHLKGNNPYAKSYTLV
NT seq
6228 nt
NT seq
+upstream
nt +downstream
nt
atgggtatccaggcagcactgcaagaggaagggcattcaaagaacatgaacagcaggagg
cagtctctgaaggctaaacctgagctgatccgcttatggtggaatgccttgaagtttcat
cttcagtatgcagcagagaaagcaaggttgaagctgttcccttgtgagcaggagctgtgg
gtgggcggtggtcaatatgtggctttggaactccccagtcctgttccctgtgactccatc
ttggctgttgttttcagtgaagatctacatgccagtctatattttgtcaatgcatctctg
caagaggtagtgtttgctagcactacagggacattggtaccctgtccagcagcagggatc
ccccctgtgacgctcagatggtacctagcaacgggcgaggagatctacgatgtcccaggg
atccgccacgtccaccccaatggcactctccaaattttccccttccctccttcaagcttt
aataacttaatccatgataacacttactattgcacagctgaaaatccttcagggaaaatc
agaagtcaggatgttcacattaaggctgttttacgggaaccctatacagtccgtgtggag
gaccagaaagccatgagaggcaatgtagcagtgttcaagtgcattatcccctcctctgtg
gaggcatacatctctgttgtctcatgggagaaagacacagtctcgcttgtctcaggatct
agatttctcatcacatccacgggagccttgtatattttagacgtacaaaatgaagacgga
ctctacaactaccgatgcatcacaaggcacagatacactggagaaacacgacaaagcaac
agcgcaagactttttgtgtcagatccagcaaattcagctccatctattctagatgggttt
gaccaccttaaagccatggcaggacagcaagtggagctgccttgcaaagcatcagggcat
cccgcaccaaagtatcgttggctgaaggacaacattcccttggagtctgacagcaggttt
cgacagacagttgaaggtctgctgattgagaactcacgtccctcagattcaggcagctac
gtctgcgaggtgtggaacaactatgggactgccgagatgatagggaggctgcatgtaaaa
caaccactaaaagccacgatcagcccacggaaagttaaaagcagtgttggtagtcaagtg
tccttgtcctgcagtgtgacaggaactgaggaccaggaactctcctggtatcgtaatggt
gagatcatcaaccctggtaacaatgtccggatcactggcatcaatcgggagaaccttatt
atggatggcatggccaagagtgatggtggagcctaccagtgttttgtgcgcaaggacaag
atgtctgctcaagactatgttcaggtggtgctagaagatggaactcccaaaatcatttcc
gccttcagtgagaaagtggtgagtccaggagagccagtctcccttatgtgcaatgtgaag
gggactcctttgcctacggtcacttggacactggatgaagatcccattgtgaaggacagc
agtcatcgtatcagtcagattatcacctctgaaggcaacgtggtcagttacctgaatatc
tctaacactcaggtccgagatggtggagtttatcgctgtactgccaacaactctgctgga
gtcgtcctgtaccaggctcgaataaacgtaagagggccagcaagcattcgaccaatgaag
aacatcacagcaatagctgggcgggacacctacatccactgtcgtgtgattggctacccg
tattactccatcaagtggtacaagaactccaatcttctaccgtttaaccatcgccaagtg
gcgtttgagaacaacgggacgctgaagctttcagatgtgcagaaagaagtagatgagggg
gaatatacatgcaatgtccttgttcaaccccagctgtccaccagccagagtgtgcatgtg
acagtaaaagttccaccttttattcagccttttgagttcccgcggttctccattgggcag
agggtcttcattccctgtgtggtggtctctggggatttgcccatcacaatcacctggcag
aaggatggcaggccaattccagccagtcttggggtgacaattgacaacatcgacttcacc
agctccttaaggatttctaatctttcgctgatgcacaatgggaattatacctgtatagct
agaaatgatgcagcagctgtggagcaccaaagccaattaatcgtgagagtgccccctcga
tttgtggtccagcctaccgaccaggatgggatctatggaaaagctgtaattctcaactgc
tctgcagaaggttaccctgttcctaccatagtctggaagtactcaaaaggtgccggggtt
cctcagttccagccaattgcattgaacggtcgtatccagcttctcataaatggctccttg
ttgattaaacatgtgctggaagaagacagtggatactacctctgcaaggtcagcaatgat
gtgggagcagacgtcagcaagtccatgtacctcactgttaaaattccagctatgataact
tcctacccaaacaccaccttggcaacgcaaggccaaaagaaggaaatgagctgcacggca
catggagagaaacccatcatagtccgctgggaaaaagaagacagaatcattaaccctgaa
atgtcccgttaccttgtttccaccaaggaagttggagatgaagtaatctctaccctgcag
attttgccaactgtgcgtgaagattctggcttcttctcctgccatgccatcaattcttat
ggggaggatcgtggaataattcagctcactgtgcaagagccccccgaccctcctgaaata
gaaatcagagaggtgagagcacgcagcattgccctcagatggaccatgggattcgatggc
aatagcttaatcactggctacgatattgaatgcaagaacaagtcagactcttgggattct
gttcagagaaccaaagatgtttcccctcagctaaaccaagccactatcattgatctccat
ccttcctcaacttacaacattcgcatgnaaaatcgcattggaaagattgaggccagcaat
gagctcaccatcactactgatgaagcagctcctgatggtccacctcaggacgttcagctc
gaacctatatcttcacaaagcattagggtcacctggaaggctccgaagaagcacttgcaa
aatggaattattcgtggataccagataggttatcgggagtacagtgcagggggaaatttc
cagttcaacatcatcactattgataccactggggacagtgaagtctatacactgaataac
ctgaaaaaattcacccagtatggcatggttgtccaggcttgtaatcgagctggaatagga
ccttcttctcaggaaatcatcaccactactcttgaggatgtgcccagctgccctccaggg
aacgtgcaagccactgccacatcaccagaaactatctctatttcttggtcaacgctggca
aaagaaacgctgaatgggattctgcaaggattccgggttatctactgggccaatctcttg
gatggagagctaggagagataaagaatgtcactactacccagccatcactagagcttgat
ggccttgaaaaatacaccaactacagcattcaggtgttggcttttacaagagctggagat
ggagtcagaagtgagcaaattttcactcgcactaaagaagatgttccaggtcctcctgct
ggtgtgaaagcagctgcagcttccgcctccaccgtctttgtgtcctggctccctcccctc
aagctgaacggcatcattcggaaatacacagtcttctgttcacacccctaccccacagta
atcagcgagtttgaagcctctcctgactcattttcctacagaatccccaacctgagccgg
aatcgccagtacagtgtctgggtggtagcagtgactgctgcgggaagaggcaacagcagc
gagattatcactgtggaaccgctagctaaagctcctgccaggattttgacattcagtggc
acagtgacaactccttggatgaaggacattgtcctcccctgcaaagccgtgggagaccca
acaccaacagtcaaatggatgaaggatagtaacgggacacccagtctagtgatgattgat
gggcgaagaagcatctttagcaatggcagctttgtcatccgtactgtgaaagcagaagac
tctggatattacagttgtgtggccagtaacaactggggatcagatgaaataattttgaat
ttgcaggtacaagttccaccagaccagccaagactcacagtatccaaaacgacatcttcc
tctatcactctgtcctggatacctggagacaatggtggcagttctatccgaggttatatt
ttgcagtattctgaagataacagtgaacagtggggtagttttcccattagccctagcgag
aggtcctatcgtttagaaacactgaagtgtggcacttggtacaagttcactttaactgct
cagaatggagtgggaccaggacgcatcagtgagatcattgaggccaaaacactagggaaa
gagccacaattctcaaaggaacaagaactctttgcaagcatcaacaccacaagagtgaag
ctgaacctgataggctggaatgatggtggctgccccatcacctccttcaccctggagtac
aggccatttgggacaacagtctggacaactgcgcagcggacatcactgtcaaagtcctac
atactgtatgacctccaggaggcaacctggtatgaattgcaaatgagagtgtgcaacagt
gctggctgtgcagagaaacaagccaaatttgcaacactcaattatgatggcagcacaatc
cctccactcattaagtcagttgtgcaaagtgaggaagggctggcaaccaacgaagggcta
aagatgctggtgaccatttcctgtatcttggttggggtcctgctgctttttgtgatgctg
ctgatcgtgcggaggagaaggagggagcagagactgaagaggctgcgagatgcaaaaagt
ttggctgaaatgcttatgagcaagaacaccaggacatcagatacacttaataaacagcag
caaacactgaggatgcacatagatattcccagagcacagcttcttatagaggaaagggac
acgatggagaccattgatgacagatcaacagttctgctcactgatgctgattttggagag
acatctaagcagaagtcactgactgtcacccacacagtacactaccagtctgtgtcacaa
gccacgggaccactggtggatgtttctgatgcccgtccaggaacaaatcctaccacaagg
aggagtgccaaaactggaccaacagctcgcaatcgctatgctagtcagtggaccctcaac
agacctcaccccaccatatcagctcataccctcaccacagactggaggctgccaactccc
aggccagcaggatcagtggacaaggaaagtgacagctacagtgtcagcccctcacaggac
acagatcgagcaagaagcagcatggtctccacagaaagtgcctcctcaacatacgaagag
ctagcgagagcgtatgaacatgctaaaatggaagagcagctgagacatgccaagttcacc
atcacagaatgcttcatatcagatacatcgtcggagcagctcacagcagggactaacgac
tacacagacagcctgacctcaagcacgccatcagagtcggggatttgcaggtttaccgcg
tcgcctcccaagcctcaagatggagggcgagtgatgaacatggcggttccaaaggcacat
cggccaggtgatctcatgcatttgccaccctatcttaggatggactttttattgaaccgt
ggcgtgcagggcacgagcagagacctgggtttggggcaagcctgcttggagccacagaaa
agccgaaccttgaagcgccccactgtcctggagccgatacccatggaggcaccctccaca
agagaagtacagtcatggcaacctggtgctgtggcaacattacctcagcgagaaggagct
gagctaggacaggcagcaaaaatgagcagctcccaagaatccctgctggactcccggggc
cacttgaaaggaaacaatccctacgcaaaatcttacaccctggtataa
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integrated database retrieval system
