Dryobates pubescens (Downy woodpecker): 104305253
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Entry
104305253 CDS
T08526
Symbol
PCDH9
Name
(RefSeq) protocadherin-9
KO
K16498
protocadherin delta 1
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104305253 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dpub01009
]
104305253 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dpub04515
]
104305253 (PCDH9)
Protein phosphatases and associated proteins [BR:
dpub01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104305253 (PCDH9)
Cell adhesion molecules [BR:
dpub04515
]
Cadherins
Protocadherins
104305253 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
RET_CLD1
Big_9
MAP17
V_ATPase_I
RCR
EphA2_TM
DUF6249
7tm_3
DUF6377
Motif
Other DBs
NCBI-GeneID:
104305253
NCBI-ProteinID:
XP_009904385
LinkDB
All DBs
Position
Unknown
AA seq
1203 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAVAQELIYTIREELPENVPIGNIPKDLNISHINAATGTGA
SLVYRLVSKAGDAPLVKVSSNTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKESQVEVHIPENAPVGTSVIQLHATDADIGSNAEIKYIFGAQVAPATK
RFFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAK
VTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPTPNDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGTAPPTTFKPNSPDLAKHYKSASPQSAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCAILSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQSQRRVTFH
LPDGSQESCSDSGLGDHEPVGGGTLISHPLPLVQPQDEFYDQASPDKRTEADGNSDPNSD
GPLGPRGLAEATEMCTQECLVLGHSDNCWMPPSLGPYQQPKSPLSTFAPQKEWVKKDKLV
NGHTLTRTWKEDSNRNQFSDRKQYGSSEGHFNSGSHMTDIPLANLKSYKQASGAVESPKE
HQL
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggctgctttgattgcctgtttaaggctggattct
gctgtagctcaagaacttatttacactattagagaggagctgcctgaaaacgtgcccata
gggaacataccaaaggacctgaacatttctcacatcaatgctgccacggggaccggtgcc
agccttgtctacagactggtgtctaaagcaggggatgcccctctggtcaaagtgtccagt
aacactggggaaatctttacgacatccaacagaatagacagagaaaaactctgtgctgga
gcttcctatgcagaagaaaatgaatgtttctttgaacttgaagtggtgattctccccaat
gacttttttaggctgatcaaaataaaaattattgtaaaggatactaatgacaatgcacct
atgtttccatcccctgtcatcaatatctccatcccagaaaacactctgatcaacagtcgc
tttccaattccatcagcaacagatcctgacacaggtttcaacggtgtgcagcactacgag
ttgctaaatgggcagagtgtctttggactggatattgtagaaactccagaaggagagaaa
tggcctcagctgatcgttcagcagaacttggacagagagcaaaaggatacgtacgtgatg
aaaataaaagtggaggatggaggcactccccagaaatccagcacagccatcctgcaagtc
acagtaagtgatgtcaatgataacaggccagtttttaaagagagccaagtagaggtccat
ataccagagaatgctcctgtaggcacttcagtaattcagcttcatgctacagatgcagat
ataggaagcaatgcagaaatcaaatatatttttggtgcccaagtcgcccctgcaaccaaa
agattttttgctttaaacaacaccacagggctgattacagttcagaggtccttagatcga
gaagaaactgctattcacaaagtgacagtgctggctagtgatggtagctctacaccagcc
agggcaactgttaccatcaatgtcactgatgtaaatgataaccctcctaacatagacctc
aggtacataataagtcccatcaatggcacagtgtacttatctgagaaagatcctgtcaat
acaaagattgccctaattacagtttcagataaggacactgatgtgaatggcaaagtgatc
tgtttcattgagagagaggttcccttccacttaaaggcagtttacgacaaccagtatttg
ttagagacctcttccttgttggactatgagggcaccaaagaattcagctttaagattgtt
gcctctgattctggcaagcccagtttgaaccagactgccctggtaagagttaaactggag
gatgaaaatgacaaccctccaattttcagccagcctgtaattgagctgtcagtttctgaa
aacaaccgtcgtggtctatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggccctaatgcctccttttttgatctggatcgaaag
acaggagttttgacagcctccagagtttttgacagagaagagcaggaacgtttcattttt
actgttacagcccgagacaatggcacccctcctttgcagagtcaagcagctgtaattgtt
accgtgttggatgaaaatgacaacagtcccaaatttactcataatcactttcagtttttt
gtctcagagaacttaccaaagtatagcactgtgggggtgatcacggtgactgatgcagat
gctggggaaaataaagcagtgaccctttccatcctgaatgacaatgaaaactttgtgctg
gatccgtactctggagttataaagtccaatgtttcttttgatcgagaacagcagagctcc
tatacctttgatgttaaggcagtggatggaggacaacctcctcgctcttctacagcaaaa
gtaaccataaacgtcatggatgttaatgacaacagccctgttgtcatctacccaccttct
aatacttcttttaagctagtgccactctcagcaattccaggatcagtagtagctgaggtc
tttgctgtggatatagacactggcatgaatgctgagctgaagtacacaattgtaagtgga
aataacaaggggttgttccggattgatccagtgacaggtaatatcactctggaagaaaaa
ccaactcctaacgatgtggggctgcatcgcttagttgtcaacataagtgatttgggttat
cctaaatccctgcatactcttgtacttgtatttttgtatgtaaatgataccgctggaaat
gcctcttacatttatgacttgatacgcaggactatggaaacacctttggaccggaacata
ggcgacagtagccaaccctatcaaaatgaggactatctcacaatcatgattgctattgtg
gcaggtgccatggttgtcatagtggtgatatttgtaacagttcttgttcgttgtcggcat
gcatccagatttaaagctgcccagaggagcaagcaaggtgctgagtggatgtctcccaat
caggagaacaaacaaaacaagaaaaagaaaaggaagaaaaggaaatctccaaagagttct
cttttgaactttgtgaccattgaggagtccaaaccagatgatgcagttcatgaacctatc
aacgggacaataagccttccagcagagctggaggagcaaagtataggaagatttgactgg
ggcacagcaccaccaacaacctttaagcctaacagtcctgatcttgccaagcattacaaa
tctgcttctccgcagtctgcttttcatctcaaacctgacactccagtttcagtgaaaaaa
caccatgtgattcaggagctcccgttggacaacacctttgttggtggttgtgccatcctt
tccaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccccttacacaccagacagtcccagcgccgtgttacatttcac
ctccctgatggctcccaggaaagctgcagtgacagtggtctaggagaccacgagccagtg
ggtggtggaaccctgatctcacaccctctccctctggttcagccgcaggacgaattctac
gaccaggcttcaccggacaagaggactgaagctgatggcaactctgaccccaactccgat
ggacctcttgggcctcgaggactagctgaagctacagagatgtgtactcaagaatgcctg
gttttgggtcactcagacaactgttggatgcctcccagcctgggcccttaccaacagcca
aagtctcctctctccacctttgcacctcagaaagagtgggttaagaaggacaaactagtt
aatggacacacattgaccaggacctggaaagaagatagcaacagaaaccagttcagtgac
cgaaagcagtatggttccagtgaaggccatttcaactctggcagccacatgactgacatt
cctctggccaacttgaagtcttataaacaggcctcaggagctgttgagagtccaaaggag
caccagttataa
DBGET
integrated database retrieval system
