Dryobates pubescens (Downy woodpecker): 104305254 Help Entry 104305254         CDS       T08526                                  Symbol MSH2 Name (RefSeq) DNA mismatch repair protein Msh2   KO K08735   DNA mismatch repair protein MSH2 Organism dpub  Dryobates pubescens (Downy woodpecker) Pathway dpub03430   Mismatch repair Brite KEGG Orthology (KO) [BR:dpub00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     104305254 (MSH2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:dpub03400]     104305254 (MSH2) DNA repair and recombination proteins [BR:dpub03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      104305254 (MSH2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  MutS_V MutS_III MutS_IV MutS_II MutS_I AAA_27 Motif Other DBs NCBI-GeneID:  104305254 NCBI-ProteinID:  XP_009904387 LinkDB All DBs Position Unknown AA seq 886 aa AA seqDB search MTRRASSAAIGCRFWRAVAAAADRTQKLESVVCSKMNFESFVRELLLVRHYRVEVYKNKA GSKSVKENDWYLAYKGSPGHLAQFEEILFANNDMSTAIGVVGVKLSTAEGQRVVGVGYVD TTLRKLSVCEFPDNDQFSNLEALLVQLGPKECVLPGGETTGEMAKVRQVIQRGGILLTDR KKADFTTKDIVQDLNRLLKSKKEEQINSAALPEMEKQVAILSLSAVIKFLELLSDESNFG QFELATFDLSQYMVLDNAAVQALNLFQSSVENANTAQSLAGLLNKCRTPQGQRLVNQWIK QPLMDKNRIEERLNLVEAFVEDPELRQCLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRM YQAINQLPNVVQALEKYEGAHQMLLLAVFITPLNDISSDFSKFVEMIETTLDMDKVENHE FLVKASFDPNLTELREVMNELEEKMQSFLKIAAKELGLEAGKSIKLETNSQFGHHFRITC KEEKVLRNNSKYEIVDTQKNGVKFTNSKLSSVNEEYIKSREEYEEAQDAIVKEIINIASG YAEPIQTMNDVIAQLDAVVSFAHVSNGAPVPYVRPVILEKGQGRIVLKGARHPCIEVQDE VAFIPNDVTFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCSSAEITIVDC ILARVGAGDSQLKRVSTFMAEMLETASILRTASENSLIIIDELGRGTSTYDGFGLAWAIS EYIASKIRAFCMFATHFHELTALADQVPTVNNLHVTALTSDDTLTMLYRVKEGVCDQSFG IHVAELAAFPKHVIESAREKALELEEFQNIGKSMKSEEEPPAKKFCREREKGEKIIQDFL CQVKALPLTDMSEEDIKLKLQELRNDVLAKNNSFVNEIISRKKVTS NT seq 2661 nt NT seq  +upstreamnt  +downstreamnt atgacgcgccgcgcgagctccgcagcgattgggtgccgcttctggcgcgcggtggcggcg gcggctgacagaactcagaagcttgagagtgtggtgtgtagtaaaatgaactttgaatct tttgtgagagagctgcttctggttcgtcattaccgagttgaagtatacaagaacaaggcg gggagtaaatctgtcaaagaaaacgactggtacttggcatacaagggctctccaggccat cttgcccagtttgaggaaattctgtttgccaacaatgatatgtcgacggccatcggggtt gtgggggttaagctgtcaactgctgagggacagagagtagtaggagtggggtatgtcgac actacgctgagaaaactgagcgtctgtgagttcccagataatgatcagttctcaaacctg gaagctctactggttcagctgggaccgaaggagtgtgtgctaccgggaggagagacgaca ggagagatggcaaaagtgcgacaagtcattcagaggggaggaatcctgctaacagacagg aagaaggcagatttcacaacaaaagatattgttcaggatctcaatcgcttgttaaaatca aagaaagaagaacagataaatagtgcagcgctgccggagatggaaaagcaggttgctatt ttgtctttgtcagctgttatcaagtttttagagttgctgtcagacgagtctaattttgga cagtttgaactggccacttttgatcttagccagtatatggttctagataatgcagctgtt caagccctcaacctttttcagagttctgtggaaaatgctaatactgcacaatctttagct ggcttgctgaacaaatgcagaacccctcaaggacaaagacttgttaatcagtggatcaaa caaccccttatggacaagaatagaattgaagaaaggttgaatttggttgaagcttttgtg gaggatccagaactccgtcagtgccttcaggaggatctcttgcgtcgcttccccgatctc aaccggctggcaaagaagttccagagacaagcagcaaacctgcaggactgttacaggatg taccaagctattaatcagctgcccaatgtggtacaggctctagaaaaatatgaaggagct caccagatgttgttactggcagtgtttataacacctcttaacgatatctcctccgacttc tcaaagtttgtggagatgatagaaacaacattggacatggataaggtggagaatcatgaa tttcttgtcaaggcttcttttgatcctaatctgacagaattaagggaggtgatgaatgag ctggaagaaaaaatgcagtccttcttaaagattgcagccaaagaactaggtttggaggct ggcaaaagtatcaaactggagacaaattcccagtttggacatcactttcggataacttgt aaggaggaaaaggttctgcggaacaattcaaagtatgaaatagttgatacccagaagaat ggggtgaagtttactaacagcaaactgagctccgtcaatgaggaatatataaagagcaga gaagagtacgaagaggctcaggatgcaattgttaaggaaatcattaatattgcttcaggt tatgcagagccaatccagaccatgaatgatgtgatagctcagttggacgcagtggtcagt ttcgctcacgtgtcaaacggggctccggtgccctacgtccgtcctgtcatcctggaaaag ggacaaggaaggattgtgctgaaaggggccaggcatccttgcattgaagtacaagacgag gtggccttcatccccaatgatgttacatttgagaaggacaagcagatgttccacattatt actggccctaacatggggggaaaatccacttatatccgccagacaggagtgattgttctg atggcccagattgggtgttttgtaccatgcagctctgcagaaatcaccattgtggattgt atcctggctcgggtgggagctggagacagccagctgaaacgggtgtctactttcatggct gaaatgctagaaactgcttcaatccttaggacagcctctgagaactccctgataatcatt gatgagctgggaagaggaacttccacctatgatggctttggcttagcctgggctatttca gaatacattgctagcaaaatccgtgctttctgcatgtttgctacacacttccacgagctg acagctcttgctgaccaggtgccaacggtaaataacctccatgtcaccgctctgaccagc gatgacaccctgaccatgctgtatcgtgtcaaggaaggtgtttgtgaccagagttttgga atacatgtggcagagctggcagctttcccaaaacatgtgatagaaagtgcaagagagaaa gcactggagctggaggagtttcaaaatattggcaagtccatgaaatctgaggaagaacca ccagccaagaaattctgcagagagagagagaaaggtgaaaagataattcaggattttctt tgtcaagtgaaagcattgcccctgacagatatgtcagaagaagacatcaaactgaagctg caggagctgaggaatgatgtgttggcaaagaacaacagcttcgtgaacgaaatcatttcc cgaaagaaagtgacttcctga

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