KEGG   Dryobates pubescens (Downy woodpecker): 104305454
Entry
104305454         CDS       T08526                                 
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
dpub  Dryobates pubescens (Downy woodpecker)
Pathway
dpub03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:dpub00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    104305454 (TAF5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dpub03021]
    104305454 (TAF5L)
   03036 Chromosome and associated proteins [BR:dpub03036]
    104305454 (TAF5L)
Transcription machinery [BR:dpub03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     104305454 (TAF5L)
   Coactivators
    SAGA/TFTC/STAGA complex
     104305454 (TAF5L)
Chromosome and associated proteins [BR:dpub03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     104305454 (TAF5L)
    STAGA complex
     104305454 (TAF5L)
    TFTC complex
     104305454 (TAF5L)
    SAGA complex
     104305454 (TAF5L)
    SLIK complex
     104305454 (TAF5L)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_Gbeta WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd TFIID_NTD2 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_Aladin ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_WDR41 Beta-prop_RIG_2nd Beta-prop_IFT140_1st NBCH_WD40 Tricorn_2nd Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_WDR19_1st WD40_RFWD3 PEP5_VPS11_N PROPPIN WD_LRWD1 Ge1_WD40 eIF2A Mala_s_1-like Nbas_N
Other DBs
NCBI-GeneID: 104305454
NCBI-ProteinID: XP_009904605
UniProt: A0A093GN92
LinkDB
Position
Unknown
AA seq 589 aa
MKRVRTEQIQMAVSCYLKRRQYVDSEGPLKQGLRLCQTTEEMAANLTVQSESGCANVVSA
APCLAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNMVQNGLKSTVDSFY
SRFHGMFLQNASQKDIIEQLQTTMTIQDILSNLKLRAFLDNKYVIRLQEDSYNYLLRYLQ
SDNNNALCKVLTLHIHLDVQPAKRTDYQLYAGGSSSRNESNGLEPSDVPASILQNEAALD
LLQDSIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPNSKLLAAGFDNSCVKLWSLRSR
KLKSEPHLVDVSRIRLACDILDEEEEEDDSAGTEMKILRGHCGPVYSTRFLSDSSGLLSC
SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPCSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNG
KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR
NTYCNAPADGSSSELVGVYTGQMNNVLSVQFMACNLLLVTGIAQENQEH
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgaaacgtgtacgcacagaacagattcagatggcagtgtcctgctacctcaagcgtcgt
cagtatgtggactcagaaggtcccctaaaacaagggctgaggctgtgtcagaccactgaa
gagatggcagctaatctcacagtccaatctgaatctggttgtgccaacgttgtgtctgca
gctccctgcctggcagagccacagcaatatgaagtacaatttggacgattgcgcaatttt
ctcacagattcagattctcagcacagccatgaagtgatgcctcttctgtatcccctcttt
gtctacctccatctgaacatggtccagaatggcctaaaaagcacagtggacagtttttac
agccgcttccatggcatgttcttgcagaatgccagccagaaggatatcattgagcagttg
cagactaccatgactattcaagatatcctgtccaacttgaagcttcgggcttttctggac
aacaagtatgtcatccgccttcaagaggacagctacaactaccttcttcgctacctccaa
agtgacaacaacaatgccctgtgcaaagtcttgaccttgcacattcacctggatgtgcag
cctgcaaagaggactgactaccagctctatgctggtgggagctcctcacgcaatgagagc
aatggcctggaacccagtgacgtgccagcttccattctgcagaatgaggcggccctggat
ttactgcaggacagcattaaacgtgtcaaggatgggcccccttccttaacaaccatctgt
ttctatgccttctataacacggagcagttgctgaacactgcagagatttcaccaaatagc
aagctgcttgctgctggttttgataattcgtgtgtgaagctatggagcctgcgttccagg
aagttgaaatctgagccgcaccttgttgatgtgtcccgcatccgtttggcttgtgacatc
ctggatgaggaggaagaagaggatgacagtgcaggcacagaaatgaagatcctgagagga
cactgtggacctgtgtacagcacaaggttcctttcagacagttcaggactcttatcttgt
tctgaggacatgtccatcagatattgggacctcggaagttttacaaacactgtgttgtac
caaggacatgcctatcctgtctgggatttagacattagcccctgcagtctgtactttgcc
agcggttcccatgatcgcactgcaaggctctggtcattcgatcggacgtacccactgcga
atatacgcaggccatttggcagatgtagactgtgtcaagttccaccccaattccaactac
ttagcaacaggctccacggacaaaactgtgcgcttgtggagcactcagcaaggcaactct
gtacgtcttttcaccgggcaccgtggtcccgtcttagcgcttgcattttctcccaatggt
aagtacctggcctcagcaggtgaagaccagcggctgaagctgtgggacttagcatcagga
acactttacaaagaactgaggggtcacacggacaacataaccagccttacttttagccct
gacagcagcttaattgcttcagcttcaatggacaattcagtccgtgtctgggacattcgg
aacacttactgcaacgctcctgcagatgggtcttccagtgaactggttggtgtatatact
ggacaaatgaataatgtactgagcgtacagtttatggcctgtaatcttcttctagtgact
ggaattgcacaagaaaatcaggaacattaa

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