Dryobates pubescens (Downy woodpecker): 104305588
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Entry
104305588 CDS
T08526
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
104305588 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpub03019
]
104305588 (MYO5C)
04131 Membrane trafficking [BR:
dpub04131
]
104305588 (MYO5C)
03029 Mitochondrial biogenesis [BR:
dpub03029
]
104305588 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dpub04812
]
104305588 (MYO5C)
Messenger RNA biogenesis [BR:
dpub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
104305588 (MYO5C)
mRNA cycle factors
P-body specific factors
104305588 (MYO5C)
Membrane trafficking [BR:
dpub04131
]
Others
Actin-binding proteins
Myosins
104305588 (MYO5C)
Mitochondrial biogenesis [BR:
dpub03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
104305588 (MYO5C)
Cytoskeleton proteins [BR:
dpub04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
104305588 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
104305588
NCBI-ProteinID:
XP_009904754
LinkDB
All DBs
Position
Unknown
AA seq
1590 aa
AA seq
DB search
MEDLKYNRVWIPDKEEVWKSAEITKNYKAGDRFLFVQLEDGTELNYPVDPAALPPLRNPD
ILVGENDLTALSYLHDPAVLHNLKVRFVESKLIYTYSGIILVAINPYKQLPIYGDAIIHA
YSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYTMRYFATVSKS
SSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDQSYQIIGANMRTYLLEK
SRVVFQSESERNYHIFYQLCASAMQPAFKHLKLGNAEEFNYTRMGGSTVIEGIDDRANMV
ETQKTFALLGLKGDFQMDVFKMLAAILHLGNVKIAAVGDERASISLEDKHLNIFCELLEL
KCDKMAQWLCHRKIITTSETVIKPMTRAQSVNARDALAKKIYSHLFDFIVEKINQALQFP
GKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDIPWTL
IDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNKNALFEKPRMSNT
SFIIQHFADKVEYKCEGFLEKNRDTVHEVLIEILKDSKFRNSLSLLMATLNATTPHYVRC
IKPNDEKLPFEFDSKRVAQQLRACGVLETIRISAQSYPSRWTYIEFFSRYSILMTQLELS
INDKKQICKTVLQRLIQDCNQYQFGRTKIFFRAGQVAYLEKLRSDKLRHACIMIQKCIRG
WLQRRRFLRVKQAAVTIQQYFRGQRTVRQAITARALKQTWAAIIIQKHCRGFLVRRLCQL
IHVAAVTIQAYTRGYLARKKYRKMLEEHKAVILQKYARAWLARRRFQNIRRFVLNIQLSY
RVQQLQKKIEEQSRENHGLLERLTSLASTHMNDMDMIQKLELDLERLTAQKRAYEEKGKK
YKEDSEQKIVKLENRNKELQEQKETLEIKLREKTEEMKEKMDDLTKQLFSDVQKEENQRM
ILEKNFQNQKQDYEKEIELLKGEIKILKEEKNQLEQQIQHEVVIQDGLKMEVGQLTKQAQ
KIPELQKEIELLQTQKLDVERQAQSQKRELRDKMSEVTKQLLESYDFEDVRSRLSTEDLE
HLNEDGELWFAYEGLKKATRVMESHFQSQKEIYEKEIEGLNFKVEHLSQDINHLQKLFRE
ENDINDGIRLEVSRLTSENLVIPDLKQQVSELENQKLDLENRLQEQAVKLKGKVPNEVDI
KEKERLKVTTQEIEGLSNGLIQEEIKDDVQSKIKQETTRLTAENMDLEEKLDMKDRIIKK
LEDQIKTLTKTIGKAEAPVPALSKEYIGMMEYKKEDEERIIQNLILDLKPRGVVVNMIPG
LPAYILFMCVRYADYLNDADMLKSFMNATIDGIKEVVKEFMKCNTPRQNENCLKHFDLSE
YRQVLSDLAIRIYHQFIVVMENNIQPMIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTD
TYTMTSILQQLSYFYSTMCQNGLDSELLKQAVKQLFFLIGAITLNSLFLRKDMCSCRKGM
QIRCNISYLEEWLKDKNLQSSNAKETLEPLSQAAWLLQVKKITDEDAKEICEHCTSLSTV
QIVKILNSYTPIDDFEKRVTPSFVRKVQLA
NT seq
4773 nt
NT seq
+upstream
nt +downstream
nt
atggaggacttgaaatacaatcgggtttggatccctgataaagaagaagtttggaagtct
gcagaaatcacaaaaaactacaaagctggagaccgttttctctttgtgcaattagaagat
ggaactgaactgaattatcctgttgatccagctgctttgccacccctgcgaaatcctgac
atccttgttggtgaaaatgatctcactgcacttagttatctccatgacccagctgttcta
cacaatctgaaagttcgttttgtggagtcgaagcttatctacacctatagcggaattatt
ttggttgcaataaacccctataaacagttgccgatatatggagatgctattatccatgca
tacagtgggcaaaacatgggggacatggatccacatatatttgctgtggcagaagaagca
tacaagcaaatggcaagaaataacaaaaatcagtctattatagtcagtggagaatcagga
gctggaaagactgtgtctgcaagatacacaatgagatactttgccactgtgagtaagtca
agcagcaatgcacatgtggaggataaagtgctggcttccaacccaataactgaggctgtt
ggcaacgcaaaaaccacacggaatgataatagcagtcgatttggaaaatacactgaaatc
agctttgatcaaagttaccaaatcattggagctaacatgagaacgtacctgcttgagaaa
tccagagttgtctttcagtcagagagtgagagaaactaccatatattttatcagttgtgt
gcatctgctatgcaacctgcatttaagcaccttaaattaggaaatgcagaagaatttaac
tacacgagaatgggtggcagcacagtaatagaaggaattgatgacagagcaaatatggtg
gagactcagaagacatttgccttacttggtctgaagggggattttcagatggatgtattt
aaaatgctggcagcaatcctacacttgggcaatgtgaaaatagctgctgttggagatgaa
agagcatccatcagtctggaagataaacatctcaacatattctgtgaacttctggagtta
aagtgtgataaaatggcacaatggttgtgccaccgaaagattatcactacctcggagact
gtaataaagccaatgacaagagctcagtctgttaatgccagggatgccttggcaaagaag
atctattctcatttatttgactttatcgtggaaaaaattaaccaagccttgcagttccct
ggcaagcaacatacttttattggtgttttggacatttatggctttgaaacatttgatgtg
aacagttttgaacagttttgcatcaattatgctaatgaaaaactgcagcagcaatttaac
ctgcatgtctttaaacttgaacaagaagaatatatgaaggaagatatcccatggacttta
atagacttctatgacaaccagcctgtcattgacctaattgaagctaaaatgggaatttta
gaacttctggatgaagaatgcttgttacctcatggaacagatgaaaactggcttcagaaa
ctatataataattttgtcaataagaatgcactctttgaaaagccaaggatgtcaaacacg
tctttcattattcaacacttcgctgataaggtagaatataaatgtgaaggatttctggaa
aaaaacagagatacggtacatgaagtattgatcgaaatcttgaaagacagcaagtttcgg
aattctttgtctttactgatggcaacactcaatgcaaccacccctcattatgtacgatgc
ataaagccaaatgatgagaaattgccttttgagtttgattcaaaaagagttgctcagcaa
ctgcgagcttgtggtgttctggaaactattcgaattagcgcacagagctacccatccagg
tggacttacatagagtttttcagccgttacagcattctcatgacacagttggaactctcc
ataaatgataagaaacagatttgcaagactgttttgcagcggctaatccaggattgtaac
cagtaccagtttgggagaacaaagattttcttcagagcaggacaggttgcttacttagaa
aagctccgctcagataagctgaggcacgcgtgcatcatgatccaaaagtgcatccgaggc
tggctgcagcgcaggaggttccttcgcgtgaagcaagcagctgtcacgatccagcagtac
ttccgggggcagcggactgtacggcaagctataactgcaagagctctgaagcaaacatgg
gcagctataattattcagaaacactgccggggtttcctggtccgtagactttgccagctc
atccatgtggctgctgtaacaattcaagcttatacaagaggatatctagcaaggaaaaaa
taccggaagatgcttgaagagcacaaggctgtgatccttcagaaatacgcccgtgcgtgg
cttgccaggcgcagatttcagaatattcggcggtttgtattgaatattcaactttcctat
agagtgcagcagctgcagaagaagatagaagaacagagtagagaaaatcatggtttgctg
gaacggttgaccagcctggcttcaactcatatgaatgatatggatatgattcagaaactt
gagttagatcttgaaaggttaactgctcaaaagagagcatatgaagagaaagggaaaaaa
tacaaagaggacagtgaacagaaaatcgtaaaacttgagaataggaataaagaattacaa
gaacagaaagagaccttagaaataaagctccgagagaaaactgaggaaatgaaagagaaa
atggatgacctcacgaagcaactcttcagtgatgtacaaaaggaagaaaatcagagaatg
atacttgagaaaaatttccaaaatcagaagcaggactatgaaaaagagattgaattgctc
aagggagaaattaagattctgaaagaagaaaaaaatcagcttgaacaacaaattcagcac
gaagttgtcattcaggatggcttgaaaatggaagtaggacaacttacaaaacaagcacag
aaaatacctgagttgcaaaaggaaatcgaactgctgcagacacaaaaattggatgttgaa
aggcaggcccagtcacaaaagcgagagctgagagacaagatgtcagaagttacaaaacag
cttctggaaagttatgattttgaggatgtaagaagcagactctccacagaggatttggaa
cacttaaatgaggatggagaactgtggtttgcttatgagggcttgaagaaagctacaaga
gtaatggaaagtcatttccagtctcagaaagaaatatatgaaaaggagattgaaggtttg
aactttaaagttgaacatctcagccaagatattaatcatctacaaaaactatttcgtgag
gaaaatgacataaatgatggtattcgacttgaagtcagcaggctaacttcagaaaacctg
gtgatcccagatcttaaacagcaagtttccgaacttgaaaaccaaaaattagatcttgaa
aaccgtcttcaagaacaggctgtgaagttgaaaggtaaagtaccaaatgaagtagacata
aaagagaaagagagactgaaagtcacaacccaagaaattgagggactgagcaatggtcta
atacaagaagaaattaaggatgatgtacaaagcaagataaagcaagagacaactcgactt
actgcggaaaacatggatcttgaagaaaaattagacatgaaagatagaataataaaaaaa
ttggaggatcagatcaaaactcttaccaagactattggaaaagctgaagctcctgtgcca
gctttgtccaaagagtacattggaatgatggagtacaaaaaagaggacgaagaaaggatc
attcaaaatctgatcctagatctgaagccacgtggagttgtagttaatatgatacctggc
cttccagcctacatcctattcatgtgtgtgaggtatgcagattatctgaatgatgctgac
atgctgaaatcttttatgaatgccaccattgatggtatcaaagaagttgttaaggaattc
atgaagtgtaacactccacgtcagaatgagaactgtttgaagcattttgacctctcagaa
tacagacaagtccttagtgatttggccatccgtatataccaccaattcattgttgtaatg
gagaacaacattcagcctatgattgtaccaggcatgctggaatatgaaagtcttcaggga
atttctggcttgaaacctacaggattccgtaaacgttcttctagtatagatgacacagat
acctacacaatgacctctatcctgcaacagctcagctatttttacagcactatgtgccag
aatggcttggactctgagcttctaaagcaggcagtgaagcagcttttctttctgattgga
gctatcaccctcaacagtctcttcctccgcaaggacatgtgctcatgtagaaaaggaatg
cagataagatgtaatatcagctacttggaagaatggcttaaggacaagaatcttcaaagc
agcaatgccaaagaaactttggagcctctatctcaagcagcctggctccttcaggttaaa
aagatcacagatgaagatgccaaggaaatatgtgaacattgcacatctctttctactgtg
cagatagttaagatcctcaactcatacactccaatagatgattttgagaaaagagtgact
ccatcatttgttcgtaaagtccagctcgcttga
DBGET
integrated database retrieval system
