Dryobates pubescens (Downy woodpecker): 104305703
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Entry
104305703 CDS
T08526
Symbol
DHX36
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104305703 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpub03019
]
104305703 (DHX36)
03012 Translation factors [BR:
dpub03012
]
104305703 (DHX36)
Enzymes [BR:
dpub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104305703 (DHX36)
Messenger RNA biogenesis [BR:
dpub03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
104305703 (DHX36)
Translation factors [BR:
dpub03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
104305703 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
AAA_14
NPHP3_N
AAA_23
PhoH
Motif
Other DBs
NCBI-GeneID:
104305703
NCBI-ProteinID:
XP_009904898
LinkDB
All DBs
Position
Unknown
AA seq
909 aa
AA seq
DB search
MDERREEQIMQLLNNVQSKTEKEQEAMSWWSGDEDGPAPEQPAKAKPQAEKAPVRQRPVP
EKTSLDRDVEYLFEKNEQDADLDEQLKEDLRKKRSDPRYIEMQRFREKLPSYGMRQELVN
LINNNRVTVISGETGCGKTTQVTQFILDDYIERGKGSTCRIVCTQPRRISAISVAERVAA
ERAEACGSGKSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDKHLSSISHVVLDEIHE
RNLQSEILMSIKKXLNVRLDLKVILMSATLNAEKFSDYFDHCPMIHIPGFTFPVVEYLLE
DVIEKLRYAPESTDRRPRWKKGFLQGHVSRPEKEEKEEIYRERWPEYLRQLRGRYSQGTI
DALEMMDDDKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDRF
IIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDT
QNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEEL
CLQIKILKLGGIASFLSKLMDPPSRDAVLLAINHLMELNALDRQEELTPLGVHLARLPVE
PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARRKELSKNTKSDHLTV
VNAFTGWEETRRRGFRTEKDYCWEYFLSANTLQMLHNMKGQFAEHLLAAGFVSSRDPKDP
KSNTNSDNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDGTVNIHPKSVNVEET
EFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQDTIAVDEWIVFQSP
ARIAHLVKNLRQELDDLLQEKIETPHPVDWADVKSRETAVLTAIIDLITTQENESVRNFA
PRFQSERYS
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggatgagcgcagggaagagcaaatcatgcagctcctgaacaacgtccagtctaaaact
gagaaggagcaagaagccatgtcctggtggtctggggatgaggatgggcctgctccagag
cagcctgcaaaggccaaaccacaggctgaaaaagctcctgtcaggcagagaccggtccca
gaaaagacatctcttgatcgggatgtggagtacctctttgagaagaatgagcaggatgct
gacttagatgagcaactgaaagaggacctgagaaagaagagatctgaccccagatacatt
gaaatgcagagattccgggagaagctgccttcctatgggatgaggcaggagcttgtcaac
ctgataaacaataatcgagtgacggtgatcagcggggaaactggctgtggcaagacgacc
caagtgacacagttcatcttggatgactacattgagagggggaaaggctctacctgcagg
attgtctgcactcagcccaggaggatcagtgctatctcagtggctgagagagttgctgct
gaaagggcagaagcatgtggcagtggcaagagtacagggtaccaaattcgcctgcagagt
cggttgccaaggaaacaaggctcaattttgtactgtaccacggggatcgtcctgcagtgg
ctccagtcagacaagcacttgtccagcattagtcatgtggtcctggatgaaattcatgaa
cgaaacctgcagtcagaaattttaatgagcatcaaaaaantgctgaacgtccgcctggat
ctgaaggtgatcctgatgagtgccactctgaacgcagagaagttctcagactattttgat
cattgtccaatgatccacatacctggcttcactttccctgtggtggaatatcttcttgaa
gatgtcattgagaagctgaggtatgctccagagagcacagaccgtcgtccccgctggaag
aagggcttcctgcagggccacgtcagcaggccggagaaagaagagaaggaggagatctac
agggagcggtggccagagtacctgaggcagctgcggggaaggtattcacagggtaccata
gatgccttggagatgatggatgatgacaaggtggacctggaccttatagcagcactgatc
agacacattgttctggaagaagaggatggagcaattctggtgttcctgccaggctgggac
aacatcagcaccctgcatgatctcctgatgtcacaggtcatgtttaaatcagacaggttt
attatcattcctttacattcactgatgcccactgttaaccagacccaggtttttaagaag
acccctccaggagtaaggaagattgtgattgctaccaacattgcagagaccagcatcaca
atagacgacgtcgtgttcgttatagacgggggcaaaataaaggagactcactttgacacc
cagaacaacatcagcaccatggcagcagagtgggttagtaaagctaatgccaagcagagg
aaaggtcgagcaggaagagttcagccaggccactgctaccatctctacaatggactccgt
gccagcctcctagatgactaccagctaccagagatcctgaggacacctttggaagagctc
tgcttacaaatcaagattctaaagcttggtggaattgcttctttcctgagcaagctcatg
gatccaccgtctcgtgatgccgtcctgttggccataaatcacctaatggagctgaatgct
ttggacagacaggaagagctgactccactgggtgtccacctagcccgattgccagttgag
ccacacattgggaaaatgatcctctttggagctttattctgctgcttggatccagtgctt
acaattgcagccagcctcagctttaaagacccttttgtcattcctctgggcaaagagaaa
gtagcagatgccagaaggaaggagctgtccaagaacaccaagagtgaccatctcactgtg
gtgaatgctttcacgggctgggaggagactcggcgccgtggtttcagaacggagaaggac
tactgctgggagtatttcctgtctgcaaatacactgcagatgctacataacatgaagggg
cagtttgccgagcatctccttgcagctgggtttgtgagtagcagagatcccaaggatccc
aaatccaataccaactcagataatgagaagctgctcaaagcagtcatctgtgctggcttg
tatccaaaagttgcaaagatccggccaagcttcagcaagaagaggaaaatggtgaaagtt
tgcaccaagacagatgggacagttaatattcaccccaaatcagtgaatgtggaagaaaca
gagttccactacaactggctggtgtaccacctgaagatgagaactagcagtatttacttg
tatgattgcacagaggtctctccctactgcctcctcttctttgggggagatatctccatt
cagaaggataaagaccaggacaccatcgccgtggatgagtggattgtcttccagtcccca
gcaaggatagcacacttagttaagaatttaagacaagagctggatgatctcctgcaagag
aaaatagaaaccccccatcctgtggactgggctgatgtgaaatccagggagacagcagtg
ctgacagccatcatagacttgatcaccacccaggagaacgaaagcgtccgcaacttcgct
ccacgcttccagagcgaacgctacagttga
DBGET
integrated database retrieval system
